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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0198900-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:5550229:5552064:-1 gene:Os02g0198900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ribosomal protein L7/L12. (Os02t0198900-01)
Sequence

ATGAGTCTCTCTACCATAGCAAGACGACTATGTTGTTCAAGACCAACATCTGGGGGTCGT
CTTTCAGCGGTTTGGGCTCATTTGTACAGCACAGAGGCTGCCAAAGACACAGGTGCTAAG
AAGTATAAATACCCTGAAGTCTATGATCCATACGGGCCTATGTCACCTCCATCGCAGAAA
GTTGTGGATCTTGCTGATCGCATTGCTGCCCTCCCTCCTGAGGAGATCAAACAGATTGCT
CCGGCTCTCCTTCTCAGACTGAACCAACCCCCACCACAGGCAATTTCTGGACAGGGTTTC
AGTTTCAGTCCTCAAGGTGGTGGCGGTGCTGCTGGTGCTGCAAAGGCAGAGGAGAAGAAA
GCAGAGAAAACAGTCTTTGACGTCAAGCTGGAGAAATTTGACGCTGCTGCTAAAATTAAG
ATCATCAAGGAGATTAGAACATTCACAGATTTGGGGCTGAAGGAGGCGAAGGAGCTAGTG
GAGAAGGCCCCTGTCATTCTGAAGCAGTCACTCACGAAGGAGGAAGCTGAGGCAATCATA
GAGAAGATTAAGGTAGCTGGCGGTGTCGCTGTGATGGAGTGA

Peptide Sequence

PEP ID

Os02t0198900-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:5550229:5552064:-1 gene:Os02g0198900 transcript:Os02t0198900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ribosomal protein L7/L12. (Os02t0198900-01)
Sequence

MSLSTIARRLCCSRPTSGGRLSAVWAHLYSTEAAKDTGAKKYKYPEVYDPYGPMSPPSQK
VVDLADRIAALPPEEIKQIAPALLLRLNQPPPQAISGQGFSFSPQGGGGAAGAAKAEEKK
AEKTVFDVKLEKFDAAAKIKIIKEIRTFTDLGLKEAKELVEKAPVILKQSLTKEEAEAII
EKIKVAGGVAVME

Transcript Sequence

Transcript ID

Os02t0198900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:5550229:5552064:-1 gene:Os02g0198900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ribosomal protein L7/L12. (Os02t0198900-01)
Sequence

GCTCTCCCGCCGCCGCCGCCGCCGCCGCCTCGCCTGCGTCGATCTCCACCCCGCGAGCGG
AGCAGCGGTGCCCGGCGTCGTCTGCTGCTTCCGCCGCATCCTCCCTCGCTCGCTGGGCAA
GGATCTTTTATTGCTTTTCTTCCCCTGGAATTTTTTTAGCTAGCAAGGAACACGGTTGAA
AGTAGGATGAGTCTCTCTACCATAGCAAGACGACTATGTTGTTCAAGACCAACATCTGGG
GGTCGTCTTTCAGCGGTTTGGGCTCATTTGTACAGCACAGAGGCTGCCAAAGACACAGGT
GCTAAGAAGTATAAATACCCTGAAGTCTATGATCCATACGGGCCTATGTCACCTCCATCG
CAGAAAGTTGTGGATCTTGCTGATCGCATTGCTGCCCTCCCTCCTGAGGAGATCAAACAG
ATTGCTCCGGCTCTCCTTCTCAGACTGAACCAACCCCCACCACAGGCAATTTCTGGACAG
GGTTTCAGTTTCAGTCCTCAAGGTGGTGGCGGTGCTGCTGGTGCTGCAAAGGCAGAGGAG
AAGAAAGCAGAGAAAACAGTCTTTGACGTCAAGCTGGAGAAATTTGACGCTGCTGCTAAA
ATTAAGATCATCAAGGAGATTAGAACATTCACAGATTTGGGGCTGAAGGAGGCGAAGGAG
CTAGTGGAGAAGGCCCCTGTCATTCTGAAGCAGTCACTCACGAAGGAGGAAGCTGAGGCA
ATCATAGAGAAGATTAAGGTAGCTGGCGGTGTCGCTGTGATGGAGTGAAGGATTAACTCC
TTTGGCACTACTACCCTTTTGTTTTCTTCAATTTTTGTTAGCATGGTCAGGCATTAGAGG
TCGCAGTATCTCTACACTTTTGTAGGAAATGTTCAGCTGTGACAGGTAAACATGGGCCAT
GATTTGGTCTGAATAAACTTTCTTCGACCACTACAACTTTCCTGATGTATTATTGTGACA
TTGGGACCGAGTGAATGGAATGTAGACAGAATTGCCTATGCTGATACCTGT