Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0197800-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:5478759:5480881:-1 gene:Os02g0197800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF971 family protein. (Os02t0197800-01)
Sequence

ATGGCTGCAGCGATGGGCGCGGCGGTGGTCCGGCGGCTCCACGCGGCGCAGGCGCAGGCG
CAGCCCCCGCGGCTGACGAAGCTCGCGCTTCGCGCGCCCAAATTCGTAGAAGTTGAATTT
GAGGATGGCAGCTCATTCCATCTGCCTGCTGAGTTTCTTAGAGTGTACAGCCCAGCAGCT
GATAGCAAAATCAGATCAGTAGCTGGTGAGAAGGTTATATTTGGGCGGCGACATGTTGGA
ATAATGTCAGCTGAATCAGTAGGAAATTACGGAGTACGGATATTGTTTGATGATCTGCAC
AAGACAGGGATCTTTACATGGGATTACTTGCACCACCTAGGTTCTAACAAGTTTGGTCTG
ATGCGAAGCTATATCACAACTTTGAAAAAGCACGGCCTTACTCGGGATCCTCAGAGAAGG
AAATGA

Peptide Sequence

PEP ID

Os02t0197800-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:5478759:5480881:-1 gene:Os02g0197800 transcript:Os02t0197800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF971 family protein. (Os02t0197800-01)
Sequence

MAAAMGAAVVRRLHAAQAQAQPPRLTKLALRAPKFVEVEFEDGSSFHLPAEFLRVYSPAA
DSKIRSVAGEKVIFGRRHVGIMSAESVGNYGVRILFDDLHKTGIFTWDYLHHLGSNKFGL
MRSYITTLKKHGLTRDPQRRK

Transcript Sequence

Transcript ID

Os02t0197800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:5478759:5480881:-1 gene:Os02g0197800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF971 family protein. (Os02t0197800-01)
Sequence

AATTATTCTCTCGCCACGTCACCATCGCTACCCCTCTCCCTCCCGAATCTCCGGCCGCCC
CTCGCCTCGCCTCGCCTCGCCTCGCCGCCGCATCCGCTGCCCGCCGGCCACCGTAGCCGC
ATCGACGCCGCGGCCGCGTCGCCGCCCCTCTCCCTACCTTCCTCCGCCCCTCGCGACATC
GCCCCTCCTCCCGCTAGGTCCGGCCGCTTCACCGGCTGGCCGTCCATGGCTGCAGCGATG
GGCGCGGCGGTGGTCCGGCGGCTCCACGCGGCGCAGGCGCAGGCGCAGCCCCCGCGGCTG
ACGAAGCTCGCGCTTCGCGCGCCCAAATTCGTAGAAGTTGAATTTGAGGATGGCAGCTCA
TTCCATCTGCCTGCTGAGTTTCTTAGAGTGTACAGCCCAGCAGCTGATAGCAAAATCAGA
TCAGTAGCTGGTGAGAAGGTTATATTTGGGCGGCGACATGTTGGAATAATGTCAGCTGAA
TCAGTAGGAAATTACGGAGTACGGATATTGTTTGATGATCTGCACAAGACAGGGATCTTT
ACATGGGATTACTTGCACCACCTAGGTTCTAACAAGTTTGGTCTGATGCGAAGCTATATC
ACAACTTTGAAAAAGCACGGCCTTACTCGGGATCCTCAGAGAAGGAAATGACGCTGGCAG
TCAGTCTTTATGTGAGTTCATTTTGACGTACCATGAAACCTCATAGAAGAAATGCTGCTT
GGAGCCCTGGGATTGAGCTTCCAGATACCAAACGCATAATGCATGAAGCTTGACAAGTAA
AGTACTAAATACAGTCACTCTATGAAGATTGGCACCAGATAACAATCTTGGAAGCCTGTT
CTTTCACCTTGAAATGATGGCCTTTGTCGAAATTTTGGCATATCTTCAGTTATATTAGAT
GGAAAGAATGACATTTGTTGGTTTGAGGCTTAAGGGTGTGTTTGTTTTGTTCCGTAACAA
AACTAAACAAATTTGTGTAATGCTAACCTGAGCAAGACCAAAAATAGTTTATGTGTGTGT
TTTGACGATGAACTTTTCTACCGATATTTGGTTATGTAATAGCCAAATCTTGTTGGTGTT