Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0197700-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:5470929:5475134:-1 gene:Os02g0197700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Di-trans-poly-cis-decaprenylcistransferase-like domain containing protein. (Os02t0197700-01)
Sequence

AAGAAAAACCTGGCACAGCCCAGCCTTAATGTTGCTACAGCCAACATAGTCCAACAACCT
ACAGTAGCCTTCTCCAATCAGATATCTTATTCACCTATGATTTTAAAGCTCATCTTAGGG
TTGCTGTGGTGCCTTGTCCACTTGGTGATCAGCTTCTTTGGTTCATTGTCACATCTGAAG
AATGATCTAGAATGCTATCTCATTTCATTCAAGTTGTTGCCCAAGTACCGAAATCTACAT
CTTGAGAGACTTGCATACTTGGGTGTTGTAGTAGATAGCAGAGAGGCAAAGAATGCTTTG
AAGGTCAAGCAACTTTTACGCTGGTTCTCAACTATTGGGATTAATTATCTAATTCTCTAT
GACATTGAAGGAGTACTAAAGGAGTTGATTCAACCTGGTATAGAAACCTCAACAGATGGG
AACCCAATAAATTCTTTAGATGTAGTTGCAGATACCAAAGCTTCATGCTATAGACATGGA
GGGATGTTTATGGAGTGTCTATCTAGCTCTGATGGCAAGGAAGCCATCGCCAAAGTAGCA
AACTTACTGTATTCCACTTGCTGCAACTCTGATAACAAAAGTGAGATTGCGTTTACAGAA
GCTGACATGACTCATGCACTGAAAGCTGTAGGTACTGGTGGGCCAGAACCTGATCTTCTC
CTTGTGTATGGTCCTGGTAGATTTCATTTGGGATTTCCTGCATGGAGATTACGGTACACA
GAGATTATGTACGTGGGTCCACTGGAATCAATGAAATATGGTACCATTGTGAAAGCTTTA
TATCGGTTCTCACGTAAATATCAAAATTATGGTAAATGA

Peptide Sequence

PEP ID

Os02t0197700-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:5470929:5475134:-1 gene:Os02g0197700 transcript:Os02t0197700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Di-trans-poly-cis-decaprenylcistransferase-like domain containing protein. (Os02t0197700-01)
Sequence

KKNLAQPSLNVATANIVQQPTVAFSNQISYSPMILKLILGLLWCLVHLVISFFGSLSHLK
NDLECYLISFKLLPKYRNLHLERLAYLGVVVDSREAKNALKVKQLLRWFSTIGINYLILY
DIEGVLKELIQPGIETSTDGNPINSLDVVADTKASCYRHGGMFMECLSSSDGKEAIAKVA
NLLYSTCCNSDNKSEIAFTEADMTHALKAVGTGGPEPDLLLVYGPGRFHLGFPAWRLRYT
EIMYVGPLESMKYGTIVKALYRFSRKYQNYGK

Transcript Sequence

Transcript ID

Os02t0197700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:5470929:5475134:-1 gene:Os02g0197700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Di-trans-poly-cis-decaprenylcistransferase-like domain containing protein. (Os02t0197700-01)
Sequence

GTCCCCATCTCCGGTGTCCCTCGCCGCCGGCGCCTCCTGCCCCTCACCGGCGCCACGCTA
ACTGTCTCCGCGCCAGCGCCAGGCGAGAGGTCTTCTTCTTCCTCCAGTGACCGGAACCCT
GGAGCCGGTGAATCCTGCTTCCTCGCTGATCGATCTCACTCCACGTCGTAGCTGTGAGCT
GTAGGGCAGGGCTGCCGGAGGCGGCATTTCTGCTCTGCCGGCGATACCTTCCTCCGCTCC
TGGTTCAGTAGTGAAAGAAAAACCTGGCACAGCCCAGCCTTAATGTTGCTACAGCCAACA
TAGTCCAACAACCTACAGTAGCCTTCTCCAATCAGATATCTTATTCACCTATGATTTTAA
AGCTCATCTTAGGGTTGCTGTGGTGCCTTGTCCACTTGGTGATCAGCTTCTTTGGTTCAT
TGTCACATCTGAAGAATGATCTAGAATGCTATCTCATTTCATTCAAGTTGTTGCCCAAGT
ACCGAAATCTACATCTTGAGAGACTTGCATACTTGGGTGTTGTAGTAGATAGCAGAGAGG
CAAAGAATGCTTTGAAGGTCAAGCAACTTTTACGCTGGTTCTCAACTATTGGGATTAATT
ATCTAATTCTCTATGACATTGAAGGAGTACTAAAGGAGTTGATTCAACCTGGTATAGAAA
CCTCAACAGATGGGAACCCAATAAATTCTTTAGATGTAGTTGCAGATACCAAAGCTTCAT
GCTATAGACATGGAGGGATGTTTATGGAGTGTCTATCTAGCTCTGATGGCAAGGAAGCCA
TCGCCAAAGTAGCAAACTTACTGTATTCCACTTGCTGCAACTCTGATAACAAAAGTGAGA
TTGCGTTTACAGAAGCTGACATGACTCATGCACTGAAAGCTGTAGGTACTGGTGGGCCAG
AACCTGATCTTCTCCTTGTGTATGGTCCTGGTAGATTTCATTTGGGATTTCCTGCATGGA
GATTACGGTACACAGAGATTATGTACGTGGGTCCACTGGAATCAATGAAATATGGTACCA
TTGTGAAAGCTTTATATCGGTTCTCACGTAAATATCAAAATTATGGTAAATGATACTGAG
TCTGAGAGCGAGGTAGTACTTGTTTACAGAAGACCCATTTTTATGTGAAGGGGACGCTTC
TGGAACTGACCAAATTTCACGCAAGTCTTGGCAGCTATCGGCATTGTGCTTCCTTCCTTT
CTGATAGAGAATCGAAATGGGCTACTCGTAGAATGAATGTTAGTTTGTTTTCGTCAGAAT
GTAAAACTACATATGTGCAGTTCAGTGGTAAAAACTCTCAAACCGAACACGTGTACCGAG
ATTGTCTTGTTTTTCACCCTGTGAAATTCGCTCTCATCTCTCACTGTTGTACTTGATGCA
CAAAATGTACAAACTGCCAAGATATTGTGTTTTTCAATGAATAGTAGTTTTACACTGTTT
ACTTCC