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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0197400-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:5463812:5464418:-1 gene:Os02g0197400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HrpN-interacting protein from Malus. (Os02t0197400-01)
Sequence

ATGGGGCTCGGGGGGCGAGGCGTGGTGGGGGAGAGGTGGTCGCAGCGCGTCCTCTGGCTC
TGCGCCATCGGCAGCGCCGTGAGCCTGTACTACGTGGCGGTGGAGAGGCAGGCGCAGAAC
CGCGCGCGGGCGGTGGCCGAGGGGCTCAAGGCCCTCGACGGCGCCGGCGCCGGAGAGGAC
GTGTGA

Peptide Sequence

PEP ID

Os02t0197400-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:5463812:5464418:-1 gene:Os02g0197400 transcript:Os02t0197400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HrpN-interacting protein from Malus. (Os02t0197400-01)
Sequence

MGLGGRGVVGERWSQRVLWLCAIGSAVSLYYVAVERQAQNRARAVAEGLKALDGAGAGED
V

Transcript Sequence

Transcript ID

Os02t0197400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:5463812:5464418:-1 gene:Os02g0197400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to HrpN-interacting protein from Malus. (Os02t0197400-01)
Sequence

ACTGGACTCGGAGGCTGCGGCCCGCACGGCGAACGGAGCGGCGGCGCAGCTCGCGCGATC
AATCGTCGGCGGCAGCGGCGGCGGCGGCGGCGGGATGGGGCTCGGGGGGCGAGGCGTGGT
GGGGGAGAGGTGGTCGCAGCGCGTCCTCTGGCTCTGCGCCATCGGCAGCGCCGTGAGCCT
GTACTACGTGGCGGTGGAGAGGCAGGCGCAGAACCGCGCGCGGGCGGTGGCCGAGGGGCT
CAAGGCCCTCGACGGCGCCGGCGCCGGAGAGGACGTGTGACTTCGCTGTGTGCTGGAGAG
GTGATCCCGGCCTGTGTAGAGACGGCCTCTCTGTTCGAGCTCGAAACGAGTTATATTTTT
GCTTACCTTGTTTCTTGTTTCATGAAATTTTCGCAATAATAATGTACTAGTAATTGCCCC
CTTTGTCATTGCGATAACTGGATTACAATTTGCGATATGGGAGCCAGAAATGATGGCCGA
AATGAATGTCATCTGTTTGTTC