Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0196600-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:5404703:5410606:1 gene:Os02g0196600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAVY METAL ATPASE 4 description:Heavy metal P1B-type ATPase, Cu-transporting ATPase, Control of Cu accumulation in rice grain (Os02t0196600-01)
Sequence	ATGGAGCAGAATGGAGAGAACCATCTCAAAGATCCACTTCTTCAGGCAGATGGAGGCGGC TCCGGTGCTTCTCCCGCCGGGGCGTCGCCGCGGAAGGAGAGGAAGACGAGGAAGGTCATG TTCAATGTCCGGGGGATCTCGTGTGCTTCGTGCGCCGTGTCGATAGAGACGGTGGTGGCT GGCCTCAAGGGAGTCGAGAGCGTCTCGGTTTCGCCGCTTCAGGGCCAAGCTGTTGTCCAG TACAGACCAGAGGAAGCCGATGCAAGAACCATAAAAGAAGCTATCGAAGGCCTCAATTTC GAGGTCGATGAACTTCAAGAACAGGAAATTGCTGTATGCAGACTCCAGATAAAAGGAATG GCATGTACAAGCTGCTCGGAATCTGTGGAGCGAGCACTTCAGATGGTACCTGGAGTGAAG AAAGCTGCAGTGGGACTTGCCCTAGAGGAAGCTAAAGTCCATTTTGATCCAAATATCACA AGTCGTGATCTTATAATTGAGGCTATTGAAGATGCTGGATTTGGAGCTGATCTCATTAGT TCCGGGGATGATGTGAACAAAGTCCACCTAAAACTAGAGGGTGTGAGTTCCCCAGAAGAC ATCAAACTCATTCAGTCAAGACTGGAATCTGTCGAAGGTGTGAATAACGTGGAATGTGAC ACAGCGGGACAGACAATAATAGTTGCATATGATCCTGATGTCACTGGCCCACGATTACTT ATTCAGTGCATTCAGGATGCTGCACAGCCCCCTAAATACTTCAATGCTAGCTTGTATTCA CCACCAAAGCAAAGAGAGGCAGAGCGCCATCATGAAATTAGGAATTACAGGAATCAATTT CTTTGGAGTTGCCTGTTTTCTGTGCCTGTATTCATGTTCTCCATGGTTCTGCCAATGATT TCTCCTTTTGGGGATTGGCTGTTTTACAAAGTATGCAATAACATGACGATAGGTATGCTA TTACGGTGGTTGCTGTGTTCTCCAGTTCAGTTCATTATTGGTTGGAGATTTTATGTTGGA GCTTATCATGCGCTAAAACGAGGATACTCGAACATGGACGTGCTTGTTGCTTTGGGGACA AATGCTGCATACTTCTATTCTGTGTATATAGTTCTGAAGGCACTAACATCAGAGTCATTT GAAGGACAGGATTTCTTCGAAACTAGTGCTATGTTGATATCTTTTATATTGCTGGGGAAA TATCTGGAGGTGGTGGCCAAAGGAAAGACATCAGATGCTTTGTCGAAGTTGACTGAACTT GCACCAGAAACAGCTTGTCTTCTTACTTTGGACAAAGATGGAAATGCCATTTCAGAAACG GAGATCAGCACTCAGTTACTTCAGAGAAATGATGTCATTAAGATTGTCCCTGGGGAAAAA GTCCCTGTTGATGGTGTTGTCATCAAAGGCCAAAGTCATGTGAATGAAAGTATGATAACT GGTGAAGCAAGGCCCATTGCAAAGAAACCAGGAGACAAGGTTATTGGTGGTACTGTAAAT GACAATGGTTGTATAATTGTTAAGGTCACTCATGTTGGGTCAGAAACAGCTTTGTCACAG ATAGTTCAGTTAGTTGAAGCTGCTCAACTTGCAAGGGCTCCAGTTCAGAAGTTGGCAGAT AGGATTTCACGGTTTTTTGTCCCAACGGTTGTGGTGGCTGCATTTCTTACATGGCTTGGC TGGTTCGTAGCTGGGCAATTCGACATATACCCTCGAGAATGGATTCCAAAGGCAATGGAT AGCTTTGAGCTTGCTCTGCAGTTTGGAATATCTGTTCTTGTTGTTGCATGCCCGTGTGCT CTTGGACTGGCTACCCCGACTGCTGTTATGGTTGCCACTGGAAAAGGTGCTTCTCAAGGT GTTCTTATTAAGGGTGGCAATGCACTTGAGAAAGCTCACAAGGTTAAAGCTATCATATTT GATAAAACTGGAACGCTGACTGTCGGTAAACCTTCTGTTGTTCAAACAAAGGTGTTCTCC AAGATACCGCTACTAGAGCTGTGTGATTTGGCTGCTGGTGCAGAGGCGAACAGTGAGCAT CCTCTATCAAAGGCTATTGTAGAGTACACAAAGAAGCTCAGGGAACAATATGGATCTCAC AGTGACCATATAATGGAGTCCAAGGACTTTGAGGTGCATCCAGGGGCAGGGGTGAGTGCC AATGTTGAAGGCAAGCTGGTGCTGGTTGGAAACAAAAGGCTTATGCAAGAATTTGAAGTT CCAATAAGTTCTGAAGTAGAGGGACACATGTCTGAAACAGAAGAGCTTGCTAGGACCTGT GTGCTTGTTGCTATCGACAGAACCATCTGCGGAGCTCTTTCTGTGTCAGATCCTCTGAAA CCTGAGGCAGGCCGTGCCATTTCATACCTCAGCTCAATGGGTATCTCGAGTATCATGGTG ACGGGCGACAATTGGGCTACAGCTAAATCCATAGCTAAAGAGGTCGGGATCGGCACAGTA TTTGCCGAGATCGATCCAGTTGGTAAAGCCGAAAAGATCAAGGACTTGCAGATGAAAGGG TTGACGGTGGCCATGGTCGGCGACGGGATAAACGACTCGCCGGCTCTAGCCGCTGCAGAC GTAGGCCTGGCGATTGGGGCTGGAACCGACGTCGCCATCGAAGCTGCCGACATTGTCCTG ATGAGGAGCAGCCTCGAGGATGTGATCACTGCCATCGATCTCTCCAGGAAGACCCTCTCA AGAATCCGGCTCAACTACGTCTGGGCTCTGGGCTACAACGTCCTGGGCATGCCGGTCGCC GCGGGCGTCCTGTTCCCGTTCACCGGCATCCGGCTGCCGCCATGGCTCGCCGGAGCTTGC ATGGCGGCCTCGTCGGTGAGCGTCGTCTGCTCGTCGCTGCTGCTCCAGCTCTACAAGAAG CCATTGCACGTCGAGGAGGTGGCTGCTGGACCCAAGAATGACCCGGATTTGGTGTGA

Peptide Sequence

PEP ID	Os02t0196600-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:5404703:5410606:1 gene:Os02g0196600 transcript:Os02t0196600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAVY METAL ATPASE 4 description:Heavy metal P1B-type ATPase, Cu-transporting ATPase, Control of Cu accumulation in rice grain (Os02t0196600-01)
Sequence	MEQNGENHLKDPLLQADGGGSGASPAGASPRKERKTRKVMFNVRGISCASCAVSIETVVA GLKGVESVSVSPLQGQAVVQYRPEEADARTIKEAIEGLNFEVDELQEQEIAVCRLQIKGM ACTSCSESVERALQMVPGVKKAAVGLALEEAKVHFDPNITSRDLIIEAIEDAGFGADLIS SGDDVNKVHLKLEGVSSPEDIKLIQSRLESVEGVNNVECDTAGQTIIVAYDPDVTGPRLL IQCIQDAAQPPKYFNASLYSPPKQREAERHHEIRNYRNQFLWSCLFSVPVFMFSMVLPMI SPFGDWLFYKVCNNMTIGMLLRWLLCSPVQFIIGWRFYVGAYHALKRGYSNMDVLVALGT NAAYFYSVYIVLKALTSESFEGQDFFETSAMLISFILLGKYLEVVAKGKTSDALSKLTEL APETACLLTLDKDGNAISETEISTQLLQRNDVIKIVPGEKVPVDGVVIKGQSHVNESMIT GEARPIAKKPGDKVIGGTVNDNGCIIVKVTHVGSETALSQIVQLVEAAQLARAPVQKLAD RISRFFVPTVVVAAFLTWLGWFVAGQFDIYPREWIPKAMDSFELALQFGISVLVVACPCA LGLATPTAVMVATGKGASQGVLIKGGNALEKAHKVKAIIFDKTGTLTVGKPSVVQTKVFS KIPLLELCDLAAGAEANSEHPLSKAIVEYTKKLREQYGSHSDHIMESKDFEVHPGAGVSA NVEGKLVLVGNKRLMQEFEVPISSEVEGHMSETEELARTCVLVAIDRTICGALSVSDPLK PEAGRAISYLSSMGISSIMVTGDNWATAKSIAKEVGIGTVFAEIDPVGKAEKIKDLQMKG LTVAMVGDGINDSPALAAADVGLAIGAGTDVAIEAADIVLMRSSLEDVITAIDLSRKTLS RIRLNYVWALGYNVLGMPVAAGVLFPFTGIRLPPWLAGACMAASSVSVVCSSLLLQLYKK PLHVEEVAAGPKNDPDLV

Transcript Sequence

Transcript ID	Os02t0196600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:5404703:5410606:1 gene:Os02g0196600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAVY METAL ATPASE 4 description:Heavy metal P1B-type ATPase, Cu-transporting ATPase, Control of Cu accumulation in rice grain (Os02t0196600-01)
Sequence	ACCAAATATAAATCAAATCCCAACGTGACCTCCCCCGCGGCCGCGGCCTGCTTCACGCCT CCCTCCTCCTCGCCGCCTCGCCGCCTCGCCTCGCCTCGCCTCGCCTCCACCGCCTCTACT AAACCCTCCGCCGCCGCCGCCGCCGCGGTGATCACCGGCGGCCGAGGGATGGAGCAGAAT GGAGAGAACCATCTCAAAGATCCACTTCTTCAGGCAGATGGAGGCGGCTCCGGTGCTTCT CCCGCCGGGGCGTCGCCGCGGAAGGAGAGGAAGACGAGGAAGGTCATGTTCAATGTCCGG GGGATCTCGTGTGCTTCGTGCGCCGTGTCGATAGAGACGGTGGTGGCTGGCCTCAAGGGA GTCGAGAGCGTCTCGGTTTCGCCGCTTCAGGGCCAAGCTGTTGTCCAGTACAGACCAGAG GAAGCCGATGCAAGAACCATAAAAGAAGCTATCGAAGGCCTCAATTTCGAGGTCGATGAA CTTCAAGAACAGGAAATTGCTGTATGCAGACTCCAGATAAAAGGAATGGCATGTACAAGC TGCTCGGAATCTGTGGAGCGAGCACTTCAGATGGTACCTGGAGTGAAGAAAGCTGCAGTG GGACTTGCCCTAGAGGAAGCTAAAGTCCATTTTGATCCAAATATCACAAGTCGTGATCTT ATAATTGAGGCTATTGAAGATGCTGGATTTGGAGCTGATCTCATTAGTTCCGGGGATGAT GTGAACAAAGTCCACCTAAAACTAGAGGGTGTGAGTTCCCCAGAAGACATCAAACTCATT CAGTCAAGACTGGAATCTGTCGAAGGTGTGAATAACGTGGAATGTGACACAGCGGGACAG ACAATAATAGTTGCATATGATCCTGATGTCACTGGCCCACGATTACTTATTCAGTGCATT CAGGATGCTGCACAGCCCCCTAAATACTTCAATGCTAGCTTGTATTCACCACCAAAGCAA AGAGAGGCAGAGCGCCATCATGAAATTAGGAATTACAGGAATCAATTTCTTTGGAGTTGC CTGTTTTCTGTGCCTGTATTCATGTTCTCCATGGTTCTGCCAATGATTTCTCCTTTTGGG GATTGGCTGTTTTACAAAGTATGCAATAACATGACGATAGGTATGCTATTACGGTGGTTG CTGTGTTCTCCAGTTCAGTTCATTATTGGTTGGAGATTTTATGTTGGAGCTTATCATGCG CTAAAACGAGGATACTCGAACATGGACGTGCTTGTTGCTTTGGGGACAAATGCTGCATAC TTCTATTCTGTGTATATAGTTCTGAAGGCACTAACATCAGAGTCATTTGAAGGACAGGAT TTCTTCGAAACTAGTGCTATGTTGATATCTTTTATATTGCTGGGGAAATATCTGGAGGTG GTGGCCAAAGGAAAGACATCAGATGCTTTGTCGAAGTTGACTGAACTTGCACCAGAAACA GCTTGTCTTCTTACTTTGGACAAAGATGGAAATGCCATTTCAGAAACGGAGATCAGCACT CAGTTACTTCAGAGAAATGATGTCATTAAGATTGTCCCTGGGGAAAAAGTCCCTGTTGAT GGTGTTGTCATCAAAGGCCAAAGTCATGTGAATGAAAGTATGATAACTGGTGAAGCAAGG CCCATTGCAAAGAAACCAGGAGACAAGGTTATTGGTGGTACTGTAAATGACAATGGTTGT ATAATTGTTAAGGTCACTCATGTTGGGTCAGAAACAGCTTTGTCACAGATAGTTCAGTTA GTTGAAGCTGCTCAACTTGCAAGGGCTCCAGTTCAGAAGTTGGCAGATAGGATTTCACGG TTTTTTGTCCCAACGGTTGTGGTGGCTGCATTTCTTACATGGCTTGGCTGGTTCGTAGCT GGGCAATTCGACATATACCCTCGAGAATGGATTCCAAAGGCAATGGATAGCTTTGAGCTT GCTCTGCAGTTTGGAATATCTGTTCTTGTTGTTGCATGCCCGTGTGCTCTTGGACTGGCT ACCCCGACTGCTGTTATGGTTGCCACTGGAAAAGGTGCTTCTCAAGGTGTTCTTATTAAG GGTGGCAATGCACTTGAGAAAGCTCACAAGGTTAAAGCTATCATATTTGATAAAACTGGA ACGCTGACTGTCGGTAAACCTTCTGTTGTTCAAACAAAGGTGTTCTCCAAGATACCGCTA CTAGAGCTGTGTGATTTGGCTGCTGGTGCAGAGGCGAACAGTGAGCATCCTCTATCAAAG GCTATTGTAGAGTACACAAAGAAGCTCAGGGAACAATATGGATCTCACAGTGACCATATA ATGGAGTCCAAGGACTTTGAGGTGCATCCAGGGGCAGGGGTGAGTGCCAATGTTGAAGGC AAGCTGGTGCTGGTTGGAAACAAAAGGCTTATGCAAGAATTTGAAGTTCCAATAAGTTCT GAAGTAGAGGGACACATGTCTGAAACAGAAGAGCTTGCTAGGACCTGTGTGCTTGTTGCT ATCGACAGAACCATCTGCGGAGCTCTTTCTGTGTCAGATCCTCTGAAACCTGAGGCAGGC CGTGCCATTTCATACCTCAGCTCAATGGGTATCTCGAGTATCATGGTGACGGGCGACAAT TGGGCTACAGCTAAATCCATAGCTAAAGAGGTCGGGATCGGCACAGTATTTGCCGAGATC GATCCAGTTGGTAAAGCCGAAAAGATCAAGGACTTGCAGATGAAAGGGTTGACGGTGGCC ATGGTCGGCGACGGGATAAACGACTCGCCGGCTCTAGCCGCTGCAGACGTAGGCCTGGCG ATTGGGGCTGGAACCGACGTCGCCATCGAAGCTGCCGACATTGTCCTGATGAGGAGCAGC CTCGAGGATGTGATCACTGCCATCGATCTCTCCAGGAAGACCCTCTCAAGAATCCGGCTC AACTACGTCTGGGCTCTGGGCTACAACGTCCTGGGCATGCCGGTCGCCGCGGGCGTCCTG TTCCCGTTCACCGGCATCCGGCTGCCGCCATGGCTCGCCGGAGCTTGCATGGCGGCCTCG TCGGTGAGCGTCGTCTGCTCGTCGCTGCTGCTCCAGCTCTACAAGAAGCCATTGCACGTC GAGGAGGTGGCTGCTGGACCCAAGAATGACCCGGATTTGGTGTGAAGACTGAAGAAGCGT CGGTCTTGCTGTGCTGACTGAAACTGAGCATGAAGCAAACGCCTTGTTTGCAGTGGCCCT CCTGACTGATTTCTGTACAGTAGTCATGTTTTGGGATTCTCTGTTTTTTTTTGGGTACTT CTGATTGATTCAATAATAATTTGGGGAGCTTAATTGCTATCCAGTGATATATAGATGTGA AATTGTGTTT