Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0194700-02
CDS Infomation	cds chromosome:IRGSP-1.0:2:5276758:5281599:-1 gene:Os02g0194700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIPOXYGENASE 1 description:Similar to Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12) (LOX2:Hv:3). (Os02t0194700-01);Similar to Lipoxygenase. (Os02t0194700-02)
Sequence	TTCGACCGCGTCTACGACTACGACGTCTACAACGACCTCGGCGACCCCGACTTCAAGATC GAGCACCTCCGCCCCGTCCTCGGCGGCGACGAACACCCCTACCCTCGCCGCTGCCGCACC GGCCGCCCCCACACCGAGATCGATCCGCGGACGGAGAAGAGGAGGGGGCCGGTGTACGTG CCTCGGGACGAGCAGTTCTCGGACGTGAAGGGGATGACGTTCAGCGCGACGACGCTGAGG TCGGGGCTGCACGCGATGCTGCCGGCGCTGGAGCCGCTGCTGGCGAACCAGGAGCTGAGG TTCCCGCACTTCCCGGCCATCGACGGCCTCTACAGCGTCGGCATCCCGCTGCCGGCGCAG CTCGCCGCCGCCGGCGCCGCCACTGCCACGGCCGGCGGCGCCGCGGCCTCCTCCTCCACC TCCACCAACATCGTCGGCGGCGTCATCCCCCGCCTCGTCCGCATGATCGAGGACACCACC GACCACGTCCTCCGCTTCGACGTCCCCGAGATGTTCGAGCGAGATAGGTTCTCGTGGTTC AGAGACGAGGAGTTCGCGAGGCAGGTGCTGGCTGGCGTCAACCCCATCTGCATCCAGCTC CTAACGGAGTTTCCCATCGTGAGCAAGCTGGACCCGGAGGTGTACGGGCCACCGGAGTCG GCGCTGACGAAGGAGTTGCTGGAGAGCCAGATCGTGGAGTCGGTGACGGTGGAGGAGGCG ATGGCGCAGCGGCGGCTCTTCATCCTGGACTACCACGACGTGTTCCTCCCCTACGTGCAC CGCGTCCGCGAGCGGCCGGAGACGACGCTCTACGGCTCCCGCACGGTGTTCTTCCTCACC GGCGCCGGCACGCTGTCGCCGCTCGCCATCGAGCTGGCGCGGCCGCAGTCGCCAACGAGG CCGCAGTGGAGGCGCGCCTTCGTCCACGGGCCCGACGCCACGGCGTCGTGGCTGTGGAAG CTCGCCAAGGCGCACGTCCTCTCCCACGACACCGGCTACCACCAGCTCGTCAGCCACTGG CTCCGCACCCACTGCTGCGTCGAGCCGTACATCATCGCCGCCAACCGGCAGCTCAGCCGG ATGCACCCGGTGCACCGCCTCCTCCACCCACACTTCCGCTACACCATGGAGATCAATGCC CTGGCCAGGGAGAGCCTCATCAATGCCGACGGCATCATCGAGGAGTCCTTCTGGCCCGGG AGGTACGCCATGGAGCTCAGCTCCGTCGCCTACGCCGCCACGTGGCGCTTCGACGCCGAG GCCCTGCCCGAGGACCTGGTGCGCCGCGGGCTCGCCGTTCGACAGGAGGACGGCGAGCTC GAGCTCACCATCAAGGACTACCCGTACGCCAACGACGGGCTGCTGGTCTGGAACTCCATC AAGCAGTGGGCGTCGGATTACATCGACTTCTACTACAAGTCCGACGAGGAGGTCGCCTGC GACGAGGAGGTGCGGGCGTGGTGGGAGGAGGTGCGCACCAAGGGGCACGCCGACAAGAAG GACGAGCCGTGGTGGCCGGCGGTGGACACCCGGGACGGGCTCATCGGCGTCTTGACCACC ATCATGTGGGTGACCTCCGGCCACCACGCCGCCGTCAACTTCGGGCAGTACCACTACGGC GGCTACTTCCCGAACCGGCCGACGGTGATGAGGAAGAAAATGCCGGTGGAGGAGAACAAG GAGGAGGAGATGAAGAAGTTCATGGAGATGCCGGAGCACGTGCTGCTGGACACCATGCCG TCCAAGATGCAGGCCATCACGATCATGGCGACGCTGGACATCCTGTCGTCGCACTCCCCC GACGAGGAGTACATGGGGGAGCACGCCGAGCCGGCGTGGCTGGCGGAGCCGAGGGTCAAG GCGGCGTTCGAGAGGTTCGCAGGGAGGATGAAGGAGATCGAGGGCATCGTCGACGAGCGG AACAACGACCCGGAGCTCAGGAACAGGTGCGGCGCCGGCATCGTGCCGTACGAGCTGCTC AAGCCGTTCTCCACGCCCGGGGTCACCGGGAGGGGCATCCCAAACAGCATCTCCATCTGA

Peptide Sequence

PEP ID	Os02t0194700-02
PEP Infomation	pep chromosome:IRGSP-1.0:2:5276758:5281599:-1 gene:Os02g0194700 transcript:Os02t0194700-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIPOXYGENASE 1 description:Similar to Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12) (LOX2:Hv:3). (Os02t0194700-01);Similar to Lipoxygenase. (Os02t0194700-02)
Sequence	FDRVYDYDVYNDLGDPDFKIEHLRPVLGGDEHPYPRRCRTGRPHTEIDPRTEKRRGPVYV PRDEQFSDVKGMTFSATTLRSGLHAMLPALEPLLANQELRFPHFPAIDGLYSVGIPLPAQ LAAAGAATATAGGAAASSSTSTNIVGGVIPRLVRMIEDTTDHVLRFDVPEMFERDRFSWF RDEEFARQVLAGVNPICIQLLTEFPIVSKLDPEVYGPPESALTKELLESQIVESVTVEEA MAQRRLFILDYHDVFLPYVHRVRERPETTLYGSRTVFFLTGAGTLSPLAIELARPQSPTR PQWRRAFVHGPDATASWLWKLAKAHVLSHDTGYHQLVSHWLRTHCCVEPYIIAANRQLSR MHPVHRLLHPHFRYTMEINALARESLINADGIIEESFWPGRYAMELSSVAYAATWRFDAE ALPEDLVRRGLAVRQEDGELELTIKDYPYANDGLLVWNSIKQWASDYIDFYYKSDEEVAC DEEVRAWWEEVRTKGHADKKDEPWWPAVDTRDGLIGVLTTIMWVTSGHHAAVNFGQYHYG GYFPNRPTVMRKKMPVEENKEEEMKKFMEMPEHVLLDTMPSKMQAITIMATLDILSSHSP DEEYMGEHAEPAWLAEPRVKAAFERFAGRMKEIEGIVDERNNDPELRNRCGAGIVPYELL KPFSTPGVTGRGIPNSISI

Transcript Sequence

Transcript ID	Os02t0194700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:5276758:5281599:-1 gene:Os02g0194700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIPOXYGENASE 1 description:Similar to Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12) (LOX2:Hv:3). (Os02t0194700-01);Similar to Lipoxygenase. (Os02t0194700-02)
Sequence	TCTTCGACCGCGTCTACGACTACGACGTCTACAACGACCTCGGCGACCCCGACTTCAAGA TCGAGCACCTCCGCCCCGTCCTCGGCGGCGACGAACACCCCTACCCTCGCCGCTGCCGCA CCGGCCGCCCCCACACCGAGATCGATCCGCGGACGGAGAAGAGGAGGGGGCCGGTGTACG TGCCTCGGGACGAGCAGTTCTCGGACGTGAAGGGGATGACGTTCAGCGCGACGACGCTGA GGTCGGGGCTGCACGCGATGCTGCCGGCGCTGGAGCCGCTGCTGGCGAACCAGGAGCTGA GGTTCCCGCACTTCCCGGCCATCGACGGCCTCTACAGCGTCGGCATCCCGCTGCCGGCGC AGCTCGCCGCCGCCGGCGCCGCCACTGCCACGGCCGGCGGCGCCGCGGCCTCCTCCTCCA CCTCCACCAACATCGTCGGCGGCGTCATCCCCCGCCTCGTCCGCATGATCGAGGACACCA CCGACCACGTCCTCCGCTTCGACGTCCCCGAGATGTTCGAGCGAGATAGGTTCTCGTGGT TCAGAGACGAGGAGTTCGCGAGGCAGGTGCTGGCTGGCGTCAACCCCATCTGCATCCAGC TCCTAACGGAGTTTCCCATCGTGAGCAAGCTGGACCCGGAGGTGTACGGGCCACCGGAGT CGGCGCTGACGAAGGAGTTGCTGGAGAGCCAGATCGTGGAGTCGGTGACGGTGGAGGAGG CGATGGCGCAGCGGCGGCTCTTCATCCTGGACTACCACGACGTGTTCCTCCCCTACGTGC ACCGCGTCCGCGAGCGGCCGGAGACGACGCTCTACGGCTCCCGCACGGTGTTCTTCCTCA CCGGCGCCGGCACGCTGTCGCCGCTCGCCATCGAGCTGGCGCGGCCGCAGTCGCCAACGA GGCCGCAGTGGAGGCGCGCCTTCGTCCACGGGCCCGACGCCACGGCGTCGTGGCTGTGGA AGCTCGCCAAGGCGCACGTCCTCTCCCACGACACCGGCTACCACCAGCTCGTCAGCCACT GGCTCCGCACCCACTGCTGCGTCGAGCCGTACATCATCGCCGCCAACCGGCAGCTCAGCC GGATGCACCCGGTGCACCGCCTCCTCCACCCACACTTCCGCTACACCATGGAGATCAATG CCCTGGCCAGGGAGAGCCTCATCAATGCCGACGGCATCATCGAGGAGTCCTTCTGGCCCG GGAGGTACGCCATGGAGCTCAGCTCCGTCGCCTACGCCGCCACGTGGCGCTTCGACGCCG AGGCCCTGCCCGAGGACCTGGTGCGCCGCGGGCTCGCCGTTCGACAGGAGGACGGCGAGC TCGAGCTCACCATCAAGGACTACCCGTACGCCAACGACGGGCTGCTGGTCTGGAACTCCA TCAAGCAGTGGGCGTCGGATTACATCGACTTCTACTACAAGTCCGACGAGGAGGTCGCCT GCGACGAGGAGGTGCGGGCGTGGTGGGAGGAGGTGCGCACCAAGGGGCACGCCGACAAGA AGGACGAGCCGTGGTGGCCGGCGGTGGACACCCGGGACGGGCTCATCGGCGTCTTGACCA CCATCATGTGGGTGACCTCCGGCCACCACGCCGCCGTCAACTTCGGGCAGTACCACTACG GCGGCTACTTCCCGAACCGGCCGACGGTGATGAGGAAGAAAATGCCGGTGGAGGAGAACA AGGAGGAGGAGATGAAGAAGTTCATGGAGATGCCGGAGCACGTGCTGCTGGACACCATGC CGTCCAAGATGCAGGCCATCACGATCATGGCGACGCTGGACATCCTGTCGTCGCACTCCC CCGACGAGGAGTACATGGGGGAGCACGCCGAGCCGGCGTGGCTGGCGGAGCCGAGGGTCA AGGCGGCGTTCGAGAGGTTCGCAGGGAGGATGAAGGAGATCGAGGGCATCGTCGACGAGC GGAACAACGACCCGGAGCTCAGGAACAGGTGCGGCGCCGGCATCGTGCCGTACGAGCTGC TCAAGCCGTTCTCCACGCCCGGGGTCACCGGGAGGGGCATCCCAAACAGCATCTCCATCT GAGTTTCGCTAGCTAAGATAGCTAGCTGCATTTGGGACAAGATTGGAGATGGTTAAGATT TGTACACTAAGATCATGTACCAACACTAATAGCTCCCGTGTATGCCTGCCTGCCACGGGA GAGGCATTTGCTAGTGTGTTTGAGTTACTAGAATGCCACAAATTAGTAAAGAGGTTATTG AACTAAAGCTCAGTTCGCTGAGTTTTCTAG