Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0193100-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:5183536:5184380:-1 gene:Os02g0193100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0193100-01)
Sequence

ATGGGATCGAAGCTTTCGTGCATCTACCGGCCGGAGAGTGACATCGTCGTCGAGTCGGAA
GCTCCGGCGCCGCCGCCGCCGCCGGCGAGGGTGATCGCGGCCGACGGCTCGCTGAGGGAG
CTGCCGGCCTCTCCCTGCGTCGCGGTGGTCTCCGACGTGCTCGGCGGCGGCGACGACGCG
GCGTCCTTCTTCGTGTGCAACTCCGACGCGCTCTACTTCGACGACCGCCCGCCGGCGCTG
TCCCCCGGCGAGCCGCTCCGGCCGGGGGAGCTCTACTTCGTGCTGCCCAGGGCGATGCTC
GGCCGGCCGCTGTCCAGCGCCGACATGGGCAGGCTCGCCGTCCGCGCGAGCCTGGCGCTC
GTCGGCGAGAGGCCACAGCGGCGGCGGCGACACCGGCAAGGCGGCGGCAAGAAGCAGAAG
AAGAAGGTGCACGTCATGCCGGCGCAAGCGCAAAGCAGAGACGACGGCGACGGCGACGTC
GACGGCGTGTTCAACGAGAAGCTGAACGAGCAGACGCTCGGCGTGTTCGCCGTGTTCCTG
AGTCCGGCGAGAGGCGCCGCGCCGGCGGCGGCGGCGGCGGCGAGGTCTCCGCTGAAGAGG
GCGTTGAGCTTAGTAGAAGAGGAGGCATAG

Peptide Sequence

PEP ID

Os02t0193100-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:5183536:5184380:-1 gene:Os02g0193100 transcript:Os02t0193100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0193100-01)
Sequence

MGSKLSCIYRPESDIVVESEAPAPPPPPARVIAADGSLRELPASPCVAVVSDVLGGGDDA
ASFFVCNSDALYFDDRPPALSPGEPLRPGELYFVLPRAMLGRPLSSADMGRLAVRASLAL
VGERPQRRRRHRQGGGKKQKKKVHVMPAQAQSRDDGDGDVDGVFNEKLNEQTLGVFAVFL
SPARGAAPAAAAAARSPLKRALSLVEEEA

Transcript Sequence

Transcript ID

Os02t0193100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:5183536:5184380:-1 gene:Os02g0193100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0193100-01)
Sequence

CTGCAAAATAAAAAATTCAGACTCAACTCTCCTTAATCTCATCAAAAACACACACAAAAG
CACACGAAAATTTCAATGGGATCGAAGCTTTCGTGCATCTACCGGCCGGAGAGTGACATC
GTCGTCGAGTCGGAAGCTCCGGCGCCGCCGCCGCCGCCGGCGAGGGTGATCGCGGCCGAC
GGCTCGCTGAGGGAGCTGCCGGCCTCTCCCTGCGTCGCGGTGGTCTCCGACGTGCTCGGC
GGCGGCGACGACGCGGCGTCCTTCTTCGTGTGCAACTCCGACGCGCTCTACTTCGACGAC
CGCCCGCCGGCGCTGTCCCCCGGCGAGCCGCTCCGGCCGGGGGAGCTCTACTTCGTGCTG
CCCAGGGCGATGCTCGGCCGGCCGCTGTCCAGCGCCGACATGGGCAGGCTCGCCGTCCGC
GCGAGCCTGGCGCTCGTCGGCGAGAGGCCACAGCGGCGGCGGCGACACCGGCAAGGCGGC
GGCAAGAAGCAGAAGAAGAAGGTGCACGTCATGCCGGCGCAAGCGCAAAGCAGAGACGAC
GGCGACGGCGACGTCGACGGCGTGTTCAACGAGAAGCTGAACGAGCAGACGCTCGGCGTG
TTCGCCGTGTTCCTGAGTCCGGCGAGAGGCGCCGCGCCGGCGGCGGCGGCGGCGGCGAGG
TCTCCGCTGAAGAGGGCGTTGAGCTTAGTAGAAGAGGAGGCATAGTAGTGAGGCAGTAGG
AAGTAGTAGTAGGAATCCGTTTCTTGTTTTGCGCAAAGTAGAATGAACCAGTATATCATC
CTCAAGTTTGGTTGTACTCACAAACAAAAAAAAAAGAGAGGAAGAAACAGGACGAATTTT
GAAGT