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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0192700-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:5166998:5167991:-1 gene:Os02g0192700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:peroxiredoxin IIE2 description:Similar to Thioredoxin peroxidase. (Os02t0192700-02)
Sequence

ATGGCCGCTCCCACCGCAGCAGCTCTCTCCACCCTCTCCACCGCCAGCGTCACCTCCGGC
AAGCGCTTCATCACCTCCTCCTTCTCCCTCTCCTTCTCCTCCCGCCCCCTCGCAACAGGC
GTCCGCGCCGCGGGGGCGAGAGCGGCGCGGAGGTCGGCGGCGTCGGCGTCCACCGTGGTG
GCGACCATCGCCGTCGGAGACAAGCTCCCCGACGCGACGCTGTCCTACTTCGACCCGGCG
GACGGCGAGCTGAAGACGGTGACGGTGGCGGAGCTGACGGCGGGCAGGAAGGCGGTGCTG
TTCGCGGTGCCCGGCGCGTTCACGCCGACGTGCTCGCAGAAGCACCTCCCGGGGTTCATC
GAGAAGGCCGGGGAGCTCCACGCCAAGGGGGTGGACGCCATTGCCTGCGTGTCGGTGAAC
GACGCGTTCGTGATGCGCGCGTGGAAGGAGAGCCTGGGCCTCGGCGACGCCGACGTGCTC
CTCCTCTCCGACGGCAACCTGGAGCTCACGCGCGCGCTCGGCGTCGAGATGGACCTCTCC
GACAAGCCCATGGGGCTCGGCGTCAGGTCGCGCCGCTACGCGCTCCTCGCCGACGACGGC
GTCGTCAAGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAG
ATGCTCAAGGCGCTCTGA

Peptide Sequence

PEP ID

Os02t0192700-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:5166998:5167991:-1 gene:Os02g0192700 transcript:Os02t0192700-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:peroxiredoxin IIE2 description:Similar to Thioredoxin peroxidase. (Os02t0192700-02)
Sequence

MAAPTAAALSTLSTASVTSGKRFITSSFSLSFSSRPLATGVRAAGARAARRSAASASTVV
ATIAVGDKLPDATLSYFDPADGELKTVTVAELTAGRKAVLFAVPGAFTPTCSQKHLPGFI
EKAGELHAKGVDAIACVSVNDAFVMRAWKESLGLGDADVLLLSDGNLELTRALGVEMDLS
DKPMGLGVRSRRYALLADDGVVKVLNLEEGGAFTTSSAEEMLKAL

Transcript Sequence

Transcript ID

Os02t0192700-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:5166998:5167991:-1 gene:Os02g0192700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:peroxiredoxin IIE2 description:Similar to Thioredoxin peroxidase. (Os02t0192700-02)
Sequence

AAATCCCAACAGAGAAGCATTTCCTCGAACACATCGCCGTCGCCGCCCTCCATGGCCGCT
CCCACCGCAGCAGCTCTCTCCACCCTCTCCACCGCCAGCGTCACCTCCGGCAAGCGCTTC
ATCACCTCCTCCTTCTCCCTCTCCTTCTCCTCCCGCCCCCTCGCAACAGGCGTCCGCGCC
GCGGGGGCGAGAGCGGCGCGGAGGTCGGCGGCGTCGGCGTCCACCGTGGTGGCGACCATC
GCCGTCGGAGACAAGCTCCCCGACGCGACGCTGTCCTACTTCGACCCGGCGGACGGCGAG
CTGAAGACGGTGACGGTGGCGGAGCTGACGGCGGGCAGGAAGGCGGTGCTGTTCGCGGTG
CCCGGCGCGTTCACGCCGACGTGCTCGCAGAAGCACCTCCCGGGGTTCATCGAGAAGGCC
GGGGAGCTCCACGCCAAGGGGGTGGACGCCATTGCCTGCGTGTCGGTGAACGACGCGTTC
GTGATGCGCGCGTGGAAGGAGAGCCTGGGCCTCGGCGACGCCGACGTGCTCCTCCTCTCC
GACGGCAACCTGGAGCTCACGCGCGCGCTCGGCGTCGAGATGGACCTCTCCGACAAGCCC
ATGGGGCTCGGCGTCAGGTCGCGCCGCTACGCGCTCCTCGCCGACGACGGCGTCGTCAAG
GTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAG
GCGCTCTGAAGATGGAATCCGAGCTCTCGTAGGTGGCAACAATGGCAGGATCAGCCCGTT
GCTCTCGCGCGTTGGTGAGTAGCGTCGTCGTTGTGAAGAGGAAATTTTGTGTGTGTTTTT
TTTCGGTTGAATGTTGCATGCCATGTGCTTGACGAAATGACGGAATAACAAAAGAAAAAA
AACTACTTTTATTTTTTTGTTGAAATTTGCAAACCATGTGTTTGACGAAATGTCGAGATA
TGAAAGCTGTGAAATCGCTTACGTCACGTGCACC