Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0190300-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:4988483:4997740:-1 gene:Os02g0190300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER B FAMILY MEMBER 9 description:P-glycoprotein homologue. (Os02t0190300-01)
Sequence	ATGGGAGGCGGCGACGGCGGCGCCGGCAAGGCGAAGGCGAGGCCGGTGTTCTCGTCGTTC ATGACAGTGTTCATGCACGCGGACGCGGCGGACGTGGCGCTGATGGTGCTTGGGCTTCTG GGCGCCATGGGCGACGGCATCTCGACGCCGGTGATGCTGCTCATCACCAGCCGCATCTTC AACGACCTCGGCAGTGGCGCCGACATCGTCAAGGAGTTCAGCTCCAAGGTCAACGTGAAC GCCAGGAACCTCGTCTTCTTGGCCGCCGCCTCTTGGGTGATGGCGTTCCTAGAGGGGTAT TGCTGGGCGAGGACGGCGGAGCGGCAGGCATCGCGGATGCGGGCACGGTACCTTCGGGCG GTGCTCCGGCAAGACGTGGAGTACTTCGACCTGAAGAAGGGGTCGACGGCGGAGGTGATC ACCAGCGTGTCCAACGACAGCCTCGTGGTGCAGGACGTGCTGAGCGAGAAGGTGCCCAAC TTCGTCATGAACGCCGCCATGTTCGCCGGCAGCTACGCCGTCGGGTTCGCGCTGCTGTGG CGGCTGACGCTGGTGGCGCTGCCGTCGGTGGTGCTGCTCATCATCCCGGGGTTCATGTAC GGCCGCATCCTCGTCGGCCTCGCCCGCCGGATCAGGGAGCAGTACACCCGCCCCGGCGCC ATCGCCGAGCAGGCCGTGTCGTCGGCGCGCACGGTGTACTCGTTCGTGGCGGAGCGGACC ACCATGGCTCAGTTCTCGGCAGCGCTCGAGGAGTCGGCGCGGCTCGGGCTCAAGCAGGGG CTCGCCAAGGGCATCGCCGTCGGCAGCAACGGCATCACCTTCGCCATCTGGGCCTTCAAC GTCTGGTACGGCAGCCGCCTCGTCATGTACCATGGATACCAGGGCGGCACCGTCTTCGCC GTCTCCGCCGCCATTGTCGTCGGTGGCCTAGCGCTGGGGTCGGGGCTGTCCAACGTGAAG TACTTCTCGGAGGCGAGCTCGGCGGCGGAGAGGATCCTGGAGGTGATCCGGCGGGTGCCG AAGATCGACTCCGAGAGCGACACCGGTGAGGAGCTGGCCAACGTCACCGGCGAGGTGGAG TTCCGGAACGTGGAGTTCTGCTACCCGTCGCGGCCAGAGAGCCCCATCTTCGTCAGCTTC AACCTCCGCGTGCCGGCGGGGCGCACCGTGGCGCTGGTCGGCGGTAGCGGGTCCGGCAAG TCGACGGTGATCGCGCTGCTGGAGCGGTTCTACGACCCGTCGGCCGGCGAGGTGATGGTC GACGGCGTGGACATCCGGAGGCTCCGGCTAAAGTGGCTGCGAGCGCAGATGGGGCTGGTG AGCCAGGAGCCGGCGCTGTTCGCCACCAGCATCAGGGAGAACATCCTGTTCGGAAAGGAG GAGGCCACGGCGGAGGAGGTGGTCGCCGCCGCCAAGGCGGCCAACGCACACAACTTCATC TCCCAGCTGCCTCAGGGCTACGACACACAGGTGGGCGAGCGTGGTGTCCAAATGTCTGGG GGGCAGAAGCAGAGAATTGCTATTGCGAGAGCAATCCTGAAATCACCCAAGATCCTCCTC CTTGATGAAGCCACTAGTGCATTGGACACTGAGTCAGAGCGCGTTGTACAGGAGGCCCTT GACCTGGCATCTATGGGCCGGACTACTATTGTGATTGCACATCGCCTATCCACTATCCGC AATGCTGACATAATTGCTGTCATGCAGTCCGGTGAGGTTAAGGAGCTGGGACCCCATGAT GAGCTCATTGCCAATGATAATGGCCTCTATTCATCTCTTGTGCGCCTTCAACAGACCAGA GATTCAAATGAGATTGATGAGATTGGTGTAACTGGTAGTACATCCGCTGTAGGGCAGTCC AGCAGCCACAGCATGAGCAGGAGGTTCTCTGCAGCTAGCAGGTCAAGCTCAGCAAGGTCA TTGGGTGATGCAAGAGATGATGACAACACTGAGAAGCCAAAGCTTCCAGTGCCATCCTTC AGAAGGCTACTTATGCTTAATGCACCAGAGTGGAAGCAAGCACTAATGGGGAGTTTTAGC GCAGTTGTGTTTGGAGGCATCCAGCCAGCATATGCATATGCCATGGGAAGCATGATCTCA GTCTACTTCTTGACAGATCATGCGGAGATCAAGGACAAAACAAGGACCTACGCACTCATC TTCGTAGGTCTAGCAGTGCTCTCATTTTTGATAAATATTGGTCAGCATTACAACTTTGGT GCAATGGGGGAATACCTCACCAAGAGAATCAGGGAGCAGATGCTTGCAAAGATCCTCACC TTCGAAATTGGGTGGTTTGACCGTGACGAGAACTCCAGTGGTGCCATATGCTCACAGCTA GCTAAGGACGCCAACGTTGTGAGGTCTCTCGTGGGTGATCGAATGGCTCTGGTGATCCAG ACTATTTCAGCAGTGCTTATTGCATGCACCATGGGTCTGGTCATTGCCTGGCGTTTGGCC CTTGTTATGATAGCAGTGCAGCCTCTGATCATTGTTTGCTTTTATGCTCGCCGTGTCTTA CTCAAGAGCATGTCCAAGAAATCAATACATGCACAAGCTGAAAGTAGCAAGCTAGCTGCT GAGGCAGTCTCCAATCTTCGTACAATTACAGCCTTCTCATCCCAAGAGCGCATCTTACGC CTTTTTGAACAATCACAAGATGGACCACGCAAGGAAAGCATCCGGCAATCATGGTTTGCA GGGCTCGGACTCGGCACCTCCATGAGCCTTATGACATGCACATGGGCCCTTGACTTTTGG TATGGTGGCAGGCTTATGGCTGAGCACCACATTAGTGCTAAGGAGCTCTTCCAAACCTTC ATGATTCTAGTAAGCACAGGTCGTGTGATTGCAGATGCAGGAAGCATGACAACAGACCTA GCTAAGGGTGCAGATGCAGTTGCTTCAGTATTTGCTGTTCTTGACCGGGAAACAGAAATT GATCCTGACAACCCTCAGGGATACAAGCCAGAGAAGCTCAAAGGCGAGGTGGACATCAGA GGAGTCGATTTTGCATACCCATCAAGGCCAGATGTTATAATCTTCAAAGGGTTCACATTG AGCATCCAACCAGGCAAGTCAACAGCCCTGGTTGGGCAAAGTGGCTCTGGCAAGTCAACC ATCATTGGGCTCATAGAGAGGTTCTACGACCCAATTAGGGGGTCGGTGAAGATAGATGGA AGGGATATCAAAGCATATAATCTTCGAGCCCTGCGGCGGCACATTGGACTGGTCAGCCAA GAGCCAACACTATTTGCAGGTACAATCAGAGAAAACATTGTGTATGGCACAGAAACGGCT AGTGAGGCGGAAATTGAGGATGCAGCAAGATCTGCTAATGCACATGACTTCATCAGCAAC CTGAAGGATGGATATGACACGTGGTGTGGTGAGAGAGGAGTTCAGTTATCAGGAGGGCAG AAACAACGCATTGCAATTGCCCGTGCCATCCTGAAGAACCCAGCTATCCTACTTCTGGAT GAGGCTACAAGTGCGCTAGACAGCCAGTCTGAGAAAGTGGTACAAGAGGCACTGGATCGG GTGATGATTGGCAGAACAAGTGTGGTGGTCGCACACAGGCTCAGCACTATACAAAACTGC GACCTTATCACTGTGCTCGAAAAAGGGACAGTTGTGGAGAAGGGCACACACGCATCCCTC ATGGCCAAGGGCCTCTCTGGAACATATTTTAGCTTGGTTAATTTGCAACAAGGAGGCAAT CAGCAGGTCCAGCACTGA

Peptide Sequence

PEP ID	Os02t0190300-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:4988483:4997740:-1 gene:Os02g0190300 transcript:Os02t0190300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER B FAMILY MEMBER 9 description:P-glycoprotein homologue. (Os02t0190300-01)
Sequence	MGGGDGGAGKAKARPVFSSFMTVFMHADAADVALMVLGLLGAMGDGISTPVMLLITSRIF NDLGSGADIVKEFSSKVNVNARNLVFLAAASWVMAFLEGYCWARTAERQASRMRARYLRA VLRQDVEYFDLKKGSTAEVITSVSNDSLVVQDVLSEKVPNFVMNAAMFAGSYAVGFALLW RLTLVALPSVVLLIIPGFMYGRILVGLARRIREQYTRPGAIAEQAVSSARTVYSFVAERT TMAQFSAALEESARLGLKQGLAKGIAVGSNGITFAIWAFNVWYGSRLVMYHGYQGGTVFA VSAAIVVGGLALGSGLSNVKYFSEASSAAERILEVIRRVPKIDSESDTGEELANVTGEVE FRNVEFCYPSRPESPIFVSFNLRVPAGRTVALVGGSGSGKSTVIALLERFYDPSAGEVMV DGVDIRRLRLKWLRAQMGLVSQEPALFATSIRENILFGKEEATAEEVVAAAKAANAHNFI SQLPQGYDTQVGERGVQMSGGQKQRIAIARAILKSPKILLLDEATSALDTESERVVQEAL DLASMGRTTIVIAHRLSTIRNADIIAVMQSGEVKELGPHDELIANDNGLYSSLVRLQQTR DSNEIDEIGVTGSTSAVGQSSSHSMSRRFSAASRSSSARSLGDARDDDNTEKPKLPVPSF RRLLMLNAPEWKQALMGSFSAVVFGGIQPAYAYAMGSMISVYFLTDHAEIKDKTRTYALI FVGLAVLSFLINIGQHYNFGAMGEYLTKRIREQMLAKILTFEIGWFDRDENSSGAICSQL AKDANVVRSLVGDRMALVIQTISAVLIACTMGLVIAWRLALVMIAVQPLIIVCFYARRVL LKSMSKKSIHAQAESSKLAAEAVSNLRTITAFSSQERILRLFEQSQDGPRKESIRQSWFA GLGLGTSMSLMTCTWALDFWYGGRLMAEHHISAKELFQTFMILVSTGRVIADAGSMTTDL AKGADAVASVFAVLDRETEIDPDNPQGYKPEKLKGEVDIRGVDFAYPSRPDVIIFKGFTL SIQPGKSTALVGQSGSGKSTIIGLIERFYDPIRGSVKIDGRDIKAYNLRALRRHIGLVSQ EPTLFAGTIRENIVYGTETASEAEIEDAARSANAHDFISNLKDGYDTWCGERGVQLSGGQ KQRIAIARAILKNPAILLLDEATSALDSQSEKVVQEALDRVMIGRTSVVVAHRLSTIQNC DLITVLEKGTVVEKGTHASLMAKGLSGTYFSLVNLQQGGNQQVQH

Transcript Sequence

Transcript ID	Os02t0190300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:4988483:4997740:-1 gene:Os02g0190300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABC TRANSPORTER B FAMILY MEMBER 9 description:P-glycoprotein homologue. (Os02t0190300-01)
Sequence	GGAGACAGCAAATTGAGCTAGATAGCTACCAAGCTATAGCTGAGAACTCGCCGACGACGG CCATGGGAGGCGGCGACGGCGGCGCCGGCAAGGCGAAGGCGAGGCCGGTGTTCTCGTCGT TCATGACAGTGTTCATGCACGCGGACGCGGCGGACGTGGCGCTGATGGTGCTTGGGCTTC TGGGCGCCATGGGCGACGGCATCTCGACGCCGGTGATGCTGCTCATCACCAGCCGCATCT TCAACGACCTCGGCAGTGGCGCCGACATCGTCAAGGAGTTCAGCTCCAAGGTCAACGTGA ACGCCAGGAACCTCGTCTTCTTGGCCGCCGCCTCTTGGGTGATGGCGTTCCTAGAGGGGT ATTGCTGGGCGAGGACGGCGGAGCGGCAGGCATCGCGGATGCGGGCACGGTACCTTCGGG CGGTGCTCCGGCAAGACGTGGAGTACTTCGACCTGAAGAAGGGGTCGACGGCGGAGGTGA TCACCAGCGTGTCCAACGACAGCCTCGTGGTGCAGGACGTGCTGAGCGAGAAGGTGCCCA ACTTCGTCATGAACGCCGCCATGTTCGCCGGCAGCTACGCCGTCGGGTTCGCGCTGCTGT GGCGGCTGACGCTGGTGGCGCTGCCGTCGGTGGTGCTGCTCATCATCCCGGGGTTCATGT ACGGCCGCATCCTCGTCGGCCTCGCCCGCCGGATCAGGGAGCAGTACACCCGCCCCGGCG CCATCGCCGAGCAGGCCGTGTCGTCGGCGCGCACGGTGTACTCGTTCGTGGCGGAGCGGA CCACCATGGCTCAGTTCTCGGCAGCGCTCGAGGAGTCGGCGCGGCTCGGGCTCAAGCAGG GGCTCGCCAAGGGCATCGCCGTCGGCAGCAACGGCATCACCTTCGCCATCTGGGCCTTCA ACGTCTGGTACGGCAGCCGCCTCGTCATGTACCATGGATACCAGGGCGGCACCGTCTTCG CCGTCTCCGCCGCCATTGTCGTCGGTGGCCTAGCGCTGGGGTCGGGGCTGTCCAACGTGA AGTACTTCTCGGAGGCGAGCTCGGCGGCGGAGAGGATCCTGGAGGTGATCCGGCGGGTGC CGAAGATCGACTCCGAGAGCGACACCGGTGAGGAGCTGGCCAACGTCACCGGCGAGGTGG AGTTCCGGAACGTGGAGTTCTGCTACCCGTCGCGGCCAGAGAGCCCCATCTTCGTCAGCT TCAACCTCCGCGTGCCGGCGGGGCGCACCGTGGCGCTGGTCGGCGGTAGCGGGTCCGGCA AGTCGACGGTGATCGCGCTGCTGGAGCGGTTCTACGACCCGTCGGCCGGCGAGGTGATGG TCGACGGCGTGGACATCCGGAGGCTCCGGCTAAAGTGGCTGCGAGCGCAGATGGGGCTGG TGAGCCAGGAGCCGGCGCTGTTCGCCACCAGCATCAGGGAGAACATCCTGTTCGGAAAGG AGGAGGCCACGGCGGAGGAGGTGGTCGCCGCCGCCAAGGCGGCCAACGCACACAACTTCA TCTCCCAGCTGCCTCAGGGCTACGACACACAGGTGGGCGAGCGTGGTGTCCAAATGTCTG GGGGGCAGAAGCAGAGAATTGCTATTGCGAGAGCAATCCTGAAATCACCCAAGATCCTCC TCCTTGATGAAGCCACTAGTGCATTGGACACTGAGTCAGAGCGCGTTGTACAGGAGGCCC TTGACCTGGCATCTATGGGCCGGACTACTATTGTGATTGCACATCGCCTATCCACTATCC GCAATGCTGACATAATTGCTGTCATGCAGTCCGGTGAGGTTAAGGAGCTGGGACCCCATG ATGAGCTCATTGCCAATGATAATGGCCTCTATTCATCTCTTGTGCGCCTTCAACAGACCA GAGATTCAAATGAGATTGATGAGATTGGTGTAACTGGTAGTACATCCGCTGTAGGGCAGT CCAGCAGCCACAGCATGAGCAGGAGGTTCTCTGCAGCTAGCAGGTCAAGCTCAGCAAGGT CATTGGGTGATGCAAGAGATGATGACAACACTGAGAAGCCAAAGCTTCCAGTGCCATCCT TCAGAAGGCTACTTATGCTTAATGCACCAGAGTGGAAGCAAGCACTAATGGGGAGTTTTA GCGCAGTTGTGTTTGGAGGCATCCAGCCAGCATATGCATATGCCATGGGAAGCATGATCT CAGTCTACTTCTTGACAGATCATGCGGAGATCAAGGACAAAACAAGGACCTACGCACTCA TCTTCGTAGGTCTAGCAGTGCTCTCATTTTTGATAAATATTGGTCAGCATTACAACTTTG GTGCAATGGGGGAATACCTCACCAAGAGAATCAGGGAGCAGATGCTTGCAAAGATCCTCA CCTTCGAAATTGGGTGGTTTGACCGTGACGAGAACTCCAGTGGTGCCATATGCTCACAGC TAGCTAAGGACGCCAACGTTGTGAGGTCTCTCGTGGGTGATCGAATGGCTCTGGTGATCC AGACTATTTCAGCAGTGCTTATTGCATGCACCATGGGTCTGGTCATTGCCTGGCGTTTGG CCCTTGTTATGATAGCAGTGCAGCCTCTGATCATTGTTTGCTTTTATGCTCGCCGTGTCT TACTCAAGAGCATGTCCAAGAAATCAATACATGCACAAGCTGAAAGTAGCAAGCTAGCTG CTGAGGCAGTCTCCAATCTTCGTACAATTACAGCCTTCTCATCCCAAGAGCGCATCTTAC GCCTTTTTGAACAATCACAAGATGGACCACGCAAGGAAAGCATCCGGCAATCATGGTTTG CAGGGCTCGGACTCGGCACCTCCATGAGCCTTATGACATGCACATGGGCCCTTGACTTTT GGTATGGTGGCAGGCTTATGGCTGAGCACCACATTAGTGCTAAGGAGCTCTTCCAAACCT TCATGATTCTAGTAAGCACAGGTCGTGTGATTGCAGATGCAGGAAGCATGACAACAGACC TAGCTAAGGGTGCAGATGCAGTTGCTTCAGTATTTGCTGTTCTTGACCGGGAAACAGAAA TTGATCCTGACAACCCTCAGGGATACAAGCCAGAGAAGCTCAAAGGCGAGGTGGACATCA GAGGAGTCGATTTTGCATACCCATCAAGGCCAGATGTTATAATCTTCAAAGGGTTCACAT TGAGCATCCAACCAGGCAAGTCAACAGCCCTGGTTGGGCAAAGTGGCTCTGGCAAGTCAA CCATCATTGGGCTCATAGAGAGGTTCTACGACCCAATTAGGGGGTCGGTGAAGATAGATG GAAGGGATATCAAAGCATATAATCTTCGAGCCCTGCGGCGGCACATTGGACTGGTCAGCC AAGAGCCAACACTATTTGCAGGTACAATCAGAGAAAACATTGTGTATGGCACAGAAACGG CTAGTGAGGCGGAAATTGAGGATGCAGCAAGATCTGCTAATGCACATGACTTCATCAGCA ACCTGAAGGATGGATATGACACGTGGTGTGGTGAGAGAGGAGTTCAGTTATCAGGAGGGC AGAAACAACGCATTGCAATTGCCCGTGCCATCCTGAAGAACCCAGCTATCCTACTTCTGG ATGAGGCTACAAGTGCGCTAGACAGCCAGTCTGAGAAAGTGGTACAAGAGGCACTGGATC GGGTGATGATTGGCAGAACAAGTGTGGTGGTCGCACACAGGCTCAGCACTATACAAAACT GCGACCTTATCACTGTGCTCGAAAAAGGGACAGTTGTGGAGAAGGGCACACACGCATCCC TCATGGCCAAGGGCCTCTCTGGAACATATTTTAGCTTGGTTAATTTGCAACAAGGAGGCA ATCAGCAGGTCCAGCACTGAGGTTTTGCATCACAACACAGCTTGCATTTCCAAATTCACA CCCCAGTTTAAATCAGTCGTCAGAACTGCAAGCAAGGATGCTCCTTATCATTTGAAATTT TGTGACAATGGGATTTTTTTTTCTCCCATTGCTCTATTAGTATATAGAAGTGTATGAAGC TTGTAGTTTTCTTTTCTTGAAATATCTGCTGGGACTGTACTGTAATGATGAGATAAGTTG TATATTAGGTTGCATTTTTTTTATTCTTCTTTGCCATATTGATTGAAAACTGCTATAGCT ATTGAACACAGTACCACACAGACTAGTAACAGTGTAACATCATGATCAGTGTATCACAGG TAGCAGAAACTATGTTCAAAAAGGTATTATATATTGAAAGAATTATTGCCCTTATGGGCT TTCAGAATATTTTTTAGATAATGGATATCAATCCAGCCTCTACATCCCACATGGACCCCA AATGGGATTTCAGAAGATGTAAGGTTAAGTGTAAGTTCAGAATGATGCTCCTTACAATCG AGTGATAGCATCGCAAAGCAAAAGGATTGGAGCAGAACTAATCGATTTTACCT