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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0189400-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:4949654:4952351:-1 gene:Os02g0189400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Defence response, Rin4 domain containing protein. (Os02t0189400-01)
Sequence

ATGGCTGGACAAGGCCCCGTGGTGCCCAAATTCGGATCGTGGGACGCCGAGAACATCGGC
TACACCGTCTTCTTCGACAAGGTGCGCGAGAACAAGACCGCGCCCACGCCGGCGACGGCG
GCGCCGGCGACGCACGACGACGACTACGAGTTCGATCCCTACGAGCACTACGAGAACCTG
AGCAGGAAAGCGGCGTCGCGCCCGCCGAGCTCGCACGGCCACGGGCACGGCCACGCGCCG
CCGCCGGCGCACCACCACCACCACCACCGGGCGCCGCCGCCGCCGCAGCAGCAGCAGCAT
CACCACCACTACCCGGCGTCGCAGCGTAGCGGCAATGGCTACCACCGGAGGAGCGGCAGC
AACGGCAGCAGCGCGGCGTCCGAGGCCAGCAGCCGCGGCAGCAAGTTCTCGCCGCCCAAG
CCGTACCAGCCGCGGTACAGCAGCAACAGCAACAGCGGTGGCGGCGGCGGCGGCTACGGG
TACGGCGGCCCCGGCGCCGGCGCGTACGCGGCGCCGCCGCAGATGCATCACCACCACCAG
CAGCAGCAGCACGCCGCGCAGCCGAGGGTGGCCGCGTCGCCGCCGCGCCACGCGCTGCCG
CAGGTGAGCCGCGCCGCGAAGGCGGCATCGGCCGTGCCCAAGTTCGGCGTGTGGGACGAG
CAGAACGCGGCGGCGGCGGGGCAGGGCTTCACGGTGCAGTTCGAGAAGGTGAAGCGGCAC
CGGGAGGTTGCGAAGGCCGCCGCCGCCGCCGGGCCGGACGTCACGCCGCGCATGTCGCCG
GCGCAGGCGGCGCCGGCGCGGCATCCTCGGAGAAAAGCCGAGAAGAGGTCCTTCTTATCA
AAGGTGTACAGGTGCATGTTCCCAAGGGTGAGGGAGTGA

Peptide Sequence

PEP ID

Os02t0189400-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:4949654:4952351:-1 gene:Os02g0189400 transcript:Os02t0189400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Defence response, Rin4 domain containing protein. (Os02t0189400-01)
Sequence

MAGQGPVVPKFGSWDAENIGYTVFFDKVRENKTAPTPATAAPATHDDDYEFDPYEHYENL
SRKAASRPPSSHGHGHGHAPPPAHHHHHHRAPPPPQQQQHHHHYPASQRSGNGYHRRSGS
NGSSAASEASSRGSKFSPPKPYQPRYSSNSNSGGGGGGYGYGGPGAGAYAAPPQMHHHHQ
QQQHAAQPRVAASPPRHALPQVSRAAKAASAVPKFGVWDEQNAAAAGQGFTVQFEKVKRH
REVAKAAAAAGPDVTPRMSPAQAAPARHPRRKAEKRSFLSKVYRCMFPRVRE

Transcript Sequence

Transcript ID

Os02t0189400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:4949654:4952351:-1 gene:Os02g0189400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Defence response, Rin4 domain containing protein. (Os02t0189400-01)
Sequence

ACATTCTCTCTTCCAGCTGCCACCCTGTTGAGTTTTGCTTGCACAGAGTCACACAGCTGG
GTGATCTCCTTTAATTAGGAATTTAGGGAGGCTGTCAGTTCTGAACCCCAATCATAAAAC
CATCCCTGGTTTCTCTGTCCTGTCCTGCCATCATTCCTGCCTGCTTCTGCTTTCTCTCTC
TTCTCTTCTCTCCTTTCCTCTTGAGAAAGAGGAAAGGGAGAGAGAAAGAGGAGAAGAGCA
ATCAGCCCAAGAAGGAGAGGCCTTCATCTTCACCTGATCGGTTCTTCTTCTTCTTCAGCA
GGCAGCATAGTACTTCATGGCTGGACAAGGCCCCGTGGTGCCCAAATTCGGATCGTGGGA
CGCCGAGAACATCGGCTACACCGTCTTCTTCGACAAGGTGCGCGAGAACAAGACCGCGCC
CACGCCGGCGACGGCGGCGCCGGCGACGCACGACGACGACTACGAGTTCGATCCCTACGA
GCACTACGAGAACCTGAGCAGGAAAGCGGCGTCGCGCCCGCCGAGCTCGCACGGCCACGG
GCACGGCCACGCGCCGCCGCCGGCGCACCACCACCACCACCACCGGGCGCCGCCGCCGCC
GCAGCAGCAGCAGCATCACCACCACTACCCGGCGTCGCAGCGTAGCGGCAATGGCTACCA
CCGGAGGAGCGGCAGCAACGGCAGCAGCGCGGCGTCCGAGGCCAGCAGCCGCGGCAGCAA
GTTCTCGCCGCCCAAGCCGTACCAGCCGCGGTACAGCAGCAACAGCAACAGCGGTGGCGG
CGGCGGCGGCTACGGGTACGGCGGCCCCGGCGCCGGCGCGTACGCGGCGCCGCCGCAGAT
GCATCACCACCACCAGCAGCAGCAGCACGCCGCGCAGCCGAGGGTGGCCGCGTCGCCGCC
GCGCCACGCGCTGCCGCAGGTGAGCCGCGCCGCGAAGGCGGCATCGGCCGTGCCCAAGTT
CGGCGTGTGGGACGAGCAGAACGCGGCGGCGGCGGGGCAGGGCTTCACGGTGCAGTTCGA
GAAGGTGAAGCGGCACCGGGAGGTTGCGAAGGCCGCCGCCGCCGCCGGGCCGGACGTCAC
GCCGCGCATGTCGCCGGCGCAGGCGGCGCCGGCGCGGCATCCTCGGAGAAAAGCCGAGAA
GAGGTCCTTCTTATCAAAGGTGTACAGGTGCATGTTCCCAAGGGTGAGGGAGTGATGCAG
AAGCTGGATTTGTATTATTAATCCGACCTTAATTAATTACTGTAAAACTCCCAATCGTAT
ACGTATTTCCGACAGGAAATGTACTGTGTAATTAATTAATTTGTTCGTTCTTGTTCTTT