Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0187700-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:4867738:4868831:1 gene:Os02g0187700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Myb-related protein B (B-Myb) (Myb-related protein 1) (XMYB1). (Os02t0187700-00)
Sequence

ATGGGGATGGAGGCGGAGTGCGATAGGATAAAGGGGCCATGGAGCCCTGAGGAGGACGAG
GCGCTGCGGCGGCTGGTGGAGCGGCACGGGGCGAGGAACTGGACGGCGATCGGGAGGGGG
ATCCCGGGGAGGTCGGGGAAGTCGTGCAGGCTGCGGTGGTGCAACCAGCTGTCGCCGCAG
GTGGAGCGCCGCCCGTTCACGGCGGAGGAGGACGCCGCGATACTCCGGGCGCACGCCCGC
CTCGGCAACCGCTGGGCCGCCATCGCGCGCCTCCTCCCCGGCCGCACCGACAACGCCGTC
AAGAACCACTGGAACTCCTCCCTCAAGCGCAAGCTCGCCACCGCCACGGACGGCGGCGAG
ATCGACCGGCCGTGTAAGCGCGTGAGCCCCGGGCCGGGGAGCCCGACGGGATCGGAGCGC
AGCGAGCTCAGCCACGGCGGCTGCGGAAGCGGAAGCGGCGGCGGGCAGGTGTTCCGCCCC
GTGCCGCGCCCCGGCGGCTTCGACGCCATCAGCGCGGCGGACGTCGTGCGGCCGCCGCGG
CGGCGGGACGACAACGACGACGACGGCGACGACGACCCGCTCACCTCGCTGTCCCTCTCC
CTCTCCCTCCCGGGGTTCCACCACGACAGCGCGCGGAGCCACTTCCAGGAGCTCCCCTCC
CCCTCCCGCTCCCCTTCGCCGCCGCCGTCGCCGCCGGCAGCATCTCCATCCGCATACCCG
TTCAACGCCGATCTCGTCTCCGCGATGCAGGAGATGATCCGCACGGAAGTCCGCAACTAC
ATGGCCGGCGTCGGGCTCCGCGCCGGCTGCGGCCCGGGCGCCGTGGCCGAGTCCTTCATG
CCGCAGCTCGTCGACGGCGTCATGCGCGCCGCCGCCGAGAGGGTCGGCGTCGTGACCCGC
CAATAA

Peptide Sequence

PEP ID

Os02t0187700-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:4867738:4868831:1 gene:Os02g0187700 transcript:Os02t0187700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Myb-related protein B (B-Myb) (Myb-related protein 1) (XMYB1). (Os02t0187700-00)
Sequence

MGMEAECDRIKGPWSPEEDEALRRLVERHGARNWTAIGRGIPGRSGKSCRLRWCNQLSPQ
VERRPFTAEEDAAILRAHARLGNRWAAIARLLPGRTDNAVKNHWNSSLKRKLATATDGGE
IDRPCKRVSPGPGSPTGSERSELSHGGCGSGSGGGQVFRPVPRPGGFDAISAADVVRPPR
RRDDNDDDGDDDPLTSLSLSLSLPGFHHDSARSHFQELPSPSRSPSPPPSPPAASPSAYP
FNADLVSAMQEMIRTEVRNYMAGVGLRAGCGPGAVAESFMPQLVDGVMRAAAERVGVVTR
Q

Transcript Sequence

Transcript ID

Os02t0187700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:4867738:4868831:1 gene:Os02g0187700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Myb-related protein B (B-Myb) (Myb-related protein 1) (XMYB1). (Os02t0187700-00)
Sequence

CGATGGGGATGGAGGCGGAGTGCGATAGGATAAAGGGGCCATGGAGCCCTGAGGAGGACG
AGGCGCTGCGGCGGCTGGTGGAGCGGCACGGGGCGAGGAACTGGACGGCGATCGGGAGGG
GGATCCCGGGGAGGTCGGGGAAGTCGTGCAGGCTGCGGTGGTGCAACCAGCTGTCGCCGC
AGGTGGAGCGCCGCCCGTTCACGGCGGAGGAGGACGCCGCGATACTCCGGGCGCACGCCC
GCCTCGGCAACCGCTGGGCCGCCATCGCGCGCCTCCTCCCCGGCCGCACCGACAACGCCG
TCAAGAACCACTGGAACTCCTCCCTCAAGCGCAAGCTCGCCACCGCCACGGACGGCGGCG
AGATCGACCGGCCGTGTAAGCGCGTGAGCCCCGGGCCGGGGAGCCCGACGGGATCGGAGC
GCAGCGAGCTCAGCCACGGCGGCTGCGGAAGCGGAAGCGGCGGCGGGCAGGTGTTCCGCC
CCGTGCCGCGCCCCGGCGGCTTCGACGCCATCAGCGCGGCGGACGTCGTGCGGCCGCCGC
GGCGGCGGGACGACAACGACGACGACGGCGACGACGACCCGCTCACCTCGCTGTCCCTCT
CCCTCTCCCTCCCGGGGTTCCACCACGACAGCGCGCGGAGCCACTTCCAGGAGCTCCCCT
CCCCCTCCCGCTCCCCTTCGCCGCCGCCGTCGCCGCCGGCAGCATCTCCATCCGCATACC
CGTTCAACGCCGATCTCGTCTCCGCGATGCAGGAGATGATCCGCACGGAAGTCCGCAACT
ACATGGCCGGCGTCGGGCTCCGCGCCGGCTGCGGCCCGGGCGCCGTGGCCGAGTCCTTCA
TGCCGCAGCTCGTCGACGGCGTCATGCGCGCCGCCGCCGAGAGGGTCGGCGTCGTGACCC
GCCAATAAAACCCCCCAAAAATAAAAAAAAAATCAACCATCCCGGTTCAAATTCACCACA
AATGCACGGTGAAAAACCACCTGTTAATTATGAGATCTGTGTAGTATTATTAGCACTAGA
ATTTTCCTGGTTCATCTTTGTATTTTACTTTGAGTAAAATTCTTCTGCTGCTCTGAAACA
GAGCAGCGGTGAAG