Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0187200-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:4838499:4841890:-1 gene:Os02g0187200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Exostosin-like family protein. (Os02t0187200-01)
Sequence

ATGGCCGGCCGCCTCCCCGGCGCCGCCTCCGCCGCCGCGGCGCCCCTCCCCCGAGCGCTC
CTGCTACTCGCCGCCCTCGCCCTATTCTCCCTCACCTTCCTCTCCCTCCGCTCGCTCCGC
CCCGCCGCGGCCCCACCCTCCCTCGCCATCGGCGGCTCCCGCCCTTCCTCCTTCGCGCGG
CCGTCGGTGTACCACTCCGCCGAGGCCTTCGCGGCGGGGTACGCGGAGATGGAGCGGAGC
TTCAAGGTGTACATGTACCCGGACGGCGACCCCAAGACGTTCTACCAGACGCCGCGGAAG
CTCACGGGGAAGTACGCCAGCGAGGGCTACTTCTTCCAGAACATCCGCGAGAGCCGCTTC
CGCACCGGCGACCCCGACAAGGCGCACCTCTTCTTCGTCCCCATCTCCCCCCACAAGATG
CGCGGCAAGGGTACTTCATATGAGAACATGACAATAATAGTTAAGGATTATGTGGAAGGC
TTGATAAACAAGTATCCTTACTGGAACAGGACACTTGGAGCGGACCATTTCTTTGTCACC
TGCCATGATGTAGGTGTTAGGGCTTTTGAAGGACTTCCATTCATGGTGAAGAATTCTATT
AGAGTTGTCTGTTCTCCAAGCTATAATGTTGACTTTATACCGCATAAGGATATCGCTCTT
CCTCAAGTATTGCAGCCATTTGCTCTGCCTGAAGGAGGAAATGATGTTGAGAACAGGACA
ATCCTTGGATTTTGGGCTGGCCATCGCAATTCTAAAATAAGAGTCATTTTGGCACAAGTC
TGGGAGAATGATACAGAGCTTGCTATCAGTAACAATCGGATCAGTAGAGCTATTGGAGAG
CTGGTTTACCAGAAGCAGTTCTACCACACAAAGTTCTGTATTTGTCCTGGTGGCTCTCAA
GTTAATAGTGCCCGTATATCTGATTCAATACACTACGGTTGTGTTCCTGTTATTTTGTCA
GACTACTACGATTTGCCTTTCAATGATATCCTAGACTGGAGAAAATTTGCTGTTGTACTT
AAGGAGCGTGATGTATATCAACTAAAAAGTATACTTAAATCTATATCACAGGAAGAGTTT
GTTGAATTGCACAAATCTCTTGTTCAGGTACAGAAACACTTTGTGTGGCATTCACCTCCT
CTTCCTTACGACGCGTTCCACATGGTTATGTATGAACTATGGTTGCGACATCATGTGATC
AAGTACTAA

Peptide Sequence

PEP ID

Os02t0187200-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:4838499:4841890:-1 gene:Os02g0187200 transcript:Os02t0187200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Exostosin-like family protein. (Os02t0187200-01)
Sequence

MAGRLPGAASAAAAPLPRALLLLAALALFSLTFLSLRSLRPAAAPPSLAIGGSRPSSFAR
PSVYHSAEAFAAGYAEMERSFKVYMYPDGDPKTFYQTPRKLTGKYASEGYFFQNIRESRF
RTGDPDKAHLFFVPISPHKMRGKGTSYENMTIIVKDYVEGLINKYPYWNRTLGADHFFVT
CHDVGVRAFEGLPFMVKNSIRVVCSPSYNVDFIPHKDIALPQVLQPFALPEGGNDVENRT
ILGFWAGHRNSKIRVILAQVWENDTELAISNNRISRAIGELVYQKQFYHTKFCICPGGSQ
VNSARISDSIHYGCVPVILSDYYDLPFNDILDWRKFAVVLKERDVYQLKSILKSISQEEF
VELHKSLVQVQKHFVWHSPPLPYDAFHMVMYELWLRHHVIKY

Transcript Sequence

Transcript ID

Os02t0187200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:4838499:4841890:-1 gene:Os02g0187200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Exostosin-like family protein. (Os02t0187200-01)
Sequence

AACTTCCCACACCCTTCCGATCCACCCTCGCATCACTCTTCCAGCCTCCCCTCCCCCCAA
CTCCGGCGATGGCCGGCCGCCTCCCCGGCGCCGCCTCCGCCGCCGCGGCGCCCCTCCCCC
GAGCGCTCCTGCTACTCGCCGCCCTCGCCCTATTCTCCCTCACCTTCCTCTCCCTCCGCT
CGCTCCGCCCCGCCGCGGCCCCACCCTCCCTCGCCATCGGCGGCTCCCGCCCTTCCTCCT
TCGCGCGGCCGTCGGTGTACCACTCCGCCGAGGCCTTCGCGGCGGGGTACGCGGAGATGG
AGCGGAGCTTCAAGGTGTACATGTACCCGGACGGCGACCCCAAGACGTTCTACCAGACGC
CGCGGAAGCTCACGGGGAAGTACGCCAGCGAGGGCTACTTCTTCCAGAACATCCGCGAGA
GCCGCTTCCGCACCGGCGACCCCGACAAGGCGCACCTCTTCTTCGTCCCCATCTCCCCCC
ACAAGATGCGCGGCAAGGGTACTTCATATGAGAACATGACAATAATAGTTAAGGATTATG
TGGAAGGCTTGATAAACAAGTATCCTTACTGGAACAGGACACTTGGAGCGGACCATTTCT
TTGTCACCTGCCATGATGTAGGTGTTAGGGCTTTTGAAGGACTTCCATTCATGGTGAAGA
ATTCTATTAGAGTTGTCTGTTCTCCAAGCTATAATGTTGACTTTATACCGCATAAGGATA
TCGCTCTTCCTCAAGTATTGCAGCCATTTGCTCTGCCTGAAGGAGGAAATGATGTTGAGA
ACAGGACAATCCTTGGATTTTGGGCTGGCCATCGCAATTCTAAAATAAGAGTCATTTTGG
CACAAGTCTGGGAGAATGATACAGAGCTTGCTATCAGTAACAATCGGATCAGTAGAGCTA
TTGGAGAGCTGGTTTACCAGAAGCAGTTCTACCACACAAAGTTCTGTATTTGTCCTGGTG
GCTCTCAAGTTAATAGTGCCCGTATATCTGATTCAATACACTACGGTTGTGTTCCTGTTA
TTTTGTCAGACTACTACGATTTGCCTTTCAATGATATCCTAGACTGGAGAAAATTTGCTG
TTGTACTTAAGGAGCGTGATGTATATCAACTAAAAAGTATACTTAAATCTATATCACAGG
AAGAGTTTGTTGAATTGCACAAATCTCTTGTTCAGGTACAGAAACACTTTGTGTGGCATT
CACCTCCTCTTCCTTACGACGCGTTCCACATGGTTATGTATGAACTATGGTTGCGACATC
ATGTGATCAAGTACTAAATTCAACCATCCAAGTCTGGGCAGATACAAACATGAAAGCCTT
ATCCGTATGAATATGATGCGGAGTCTGACAACTATCCGGTGCTCTACTGAACATGCATTC
ATTCTTATGCTCATATATCAGCAACTGGATGGATCATTGTGCGTAGGTGTCATCTTGAGC
ATCTGCATCAGAGAAGTTGGCGACCATCGACCATAAATCATCAAAATGGAGTTGCTAGGT
AATAGACTGATTAGTTCATTCTTTCAAGAATAGTTTTGTTTTTCCGCCATATTGCACTCT
TTGTAAGCTGCGTTTTCTAGTTTGCCTGTGATACGGTATCCTTTACGGATCTGCCCATTT
CTTACTCATGTAAAGTAATGTACGATGTTACTAACAAGACAGAGAACTGAACCAAGTAGG
AGTAGAATATTGTTGTGATCAGCAAACTTTCAGGGGTTAATTTCACCATGCACCATGCGA
TCTATGGACTTCTATTTT