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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0187100-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:4831212:4833985:1 gene:Os02g0187100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cyclase-like 1 description:Similar to cyclase. (Os02t0187100-00)
Sequence

ATGGCGGCATCTCGGCTTGCGCTCCTCCTCCTCGTCCTCGCCGTCGCCGCGGCGCGCCAC
GCGCTCCCGGCGGCGGGGAGCGACGCGCACCCGGGGTACGACGGCGCGGAGGACACCTGC
GGGGTCCCGGCGGCGGCGGCGGCGGCGGGGAGGATGGAGGAGTACGGCGGCGGGCGGATC
CTGGACATCACCCACGCGTACCGGGCGGACCTGCCGGCGTTCGCGCCGGGGGCGGTGACG
GGGCCGGTGGTGCGGCTCAGGGACTCCATGGCGAACGGGACGCTCTACAACCTGTCGGAG
CTCAAGATGGAGTGCCACATGGGCACCCACGTCGACGCGCCGGGCCACATGAACCAGGGC
CACTTCGCCGCCGGCCTCGACGTCGACAAGCTCGACCTCGACCTCCTCAACGGTCCTACA
TTATTGGTTGATACTCCAAGAAACACAAATATAACAGCTAAAGCAATGGAGTCGTTAAAT
ATACCAAAAGGTGTTCGTCGAGTTCTTTTCAGGACATTGAACACAGATAGGTATGTACTC
TTTTCTGGACATATATTCATGCATAATATTCACACCTTTTCCCATAGTGCAGGCTCAGTT
TTTAGAACAAGTGGTCCGTTGTCCATATGCTCATTTTCAGCATTTCTCTTTTGCATCTTT
ACAATACAGATATCATTAGTTCATCTATATAACCAATTAAACTGTAAGCAAATGATTTGC
AGGAAGCTCATGTGGAAGAAGGGAGGTGATCTGAGTTATGTCGGATTCACAGAAGATGGC
GCACAGTGGTTAGTTGACAACACTGACATCAAGCTAGTTGGTATGTAA

Peptide Sequence

PEP ID

Os02t0187100-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:4831212:4833985:1 gene:Os02g0187100 transcript:Os02t0187100-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cyclase-like 1 description:Similar to cyclase. (Os02t0187100-00)
Sequence

MAASRLALLLLVLAVAAARHALPAAGSDAHPGYDGAEDTCGVPAAAAAAGRMEEYGGGRI
LDITHAYRADLPAFAPGAVTGPVVRLRDSMANGTLYNLSELKMECHMGTHVDAPGHMNQG
HFAAGLDVDKLDLDLLNGPTLLVDTPRNTNITAKAMESLNIPKGVRRVLFRTLNTDRYVL
FSGHIFMHNIHTFSHSAGSVFRTSGPLSICSFSAFLFCIFTIQISLVHLYNQLNCKQMIC
RKLMWKKGGDLSYVGFTEDGAQWLVDNTDIKLVGM

Transcript Sequence

Transcript ID

Os02t0187100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:4831212:4833985:1 gene:Os02g0187100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cyclase-like 1 description:Similar to cyclase. (Os02t0187100-00)
Sequence

ATGGCGGCATCTCGGCTTGCGCTCCTCCTCCTCGTCCTCGCCGTCGCCGCGGCGCGCCAC
GCGCTCCCGGCGGCGGGGAGCGACGCGCACCCGGGGTACGACGGCGCGGAGGACACCTGC
GGGGTCCCGGCGGCGGCGGCGGCGGCGGGGAGGATGGAGGAGTACGGCGGCGGGCGGATC
CTGGACATCACCCACGCGTACCGGGCGGACCTGCCGGCGTTCGCGCCGGGGGCGGTGACG
GGGCCGGTGGTGCGGCTCAGGGACTCCATGGCGAACGGGACGCTCTACAACCTGTCGGAG
CTCAAGATGGAGTGCCACATGGGCACCCACGTCGACGCGCCGGGCCACATGAACCAGGGC
CACTTCGCCGCCGGCCTCGACGTCGACAAGCTCGACCTCGACCTCCTCAACGGTCCTACA
TTATTGGTTGATACTCCAAGAAACACAAATATAACAGCTAAAGCAATGGAGTCGTTAAAT
ATACCAAAAGGTGTTCGTCGAGTTCTTTTCAGGACATTGAACACAGATAGGTATGTACTC
TTTTCTGGACATATATTCATGCATAATATTCACACCTTTTCCCATAGTGCAGGCTCAGTT
TTTAGAACAAGTGGTCCGTTGTCCATATGCTCATTTTCAGCATTTCTCTTTTGCATCTTT
ACAATACAGATATCATTAGTTCATCTATATAACCAATTAAACTGTAAGCAAATGATTTGC
AGGAAGCTCATGTGGAAGAAGGGAGGTGATCTGAGTTATGTCGGATTCACAGAAGATGGC
GCACAGTGGTTAGTTGACAACACTGACATCAAGCTAGTTGGTATGTAA