Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0186400-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:4803290:4806457:-1 gene:Os02g0186400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Spectrin repeat containing protein. (Os02t0186400-01)
Sequence	ATGCCACCCCTCTCCCCTTCCTCCTCGCCGCCGGCGACGGCGGCGGCGGTTCTCCGCTGC GGCTCCCCGTCGTGCCGCCCCGTCACACATGAGCTGTTCAGGCAGAAGTTGAGTTTCATG GTGTCATTTCAAGCTCAACATATGAGATGTGCTCCTCATTTGATCAAATCAGTTGTTAAA GGTATTAGAGCAAATATCACTGATGGCGAGAATGGAGCAACTGAACCAGCTAGGGAGCTA TTGGAGCGGCTGTTTGCGAAGACGCAAAGGTTGGATACCAGTGCTTCCCAGGATAGTGAG CTGAGTATGAGCATTGATGTACTGAAGTCTGAATTTGAGGCCGCCTTGTCTACCTTGAGG AAGAAAGAGAGGGATCTCCGAGATGCGGAGAATCGGGTTTCAGTTGATCAGGTACGCCTG AACCGGGCGAAGAAGGATCTTGATCAGAGAGAGCGTGGGATCAATAGAGCATATGCAAGG CAACAGGAAATGGAGAGATCACTGGGTAAGGCAAGTAGAGATCTGGTTTTACAAGTGAGG CAGATCGATAACCTGAAGCTTCTTGTTGATGAGCAAGACAAGAAAATTGCCAGCTCACAA GATTTGCTTTCTCAGAAGGTAACTGAAGTGGAAAAGCTTAAGCAAGATATGTTGAAGAAG AATGAAGAAGTAACCTTGATGCGTTCAGAGATCAAGTCCAAGGAACAGCTGCTTCTTGAA GCTAATCAGGCTGCTGAGCAGCAAGAAGCAACAATTAAGGAGCTCCGGAGTGAAATTAAA AGAAAAGAAATTGATTTTTCCAGATCGAATGAATTGAGAAAGGCCAATGAACAGAAACTA AAAATCGCCGAGCAAGAACTTGAGAGGCAGAATATGGGATGGTTAGCAGCACAGAAAGAG TTAAAGGAAGTGGCGCAACTAGCATGCAAGGATATGGATGGTATCAAGGATACAGTCAGT GACTTCAAACGTGTGAGGTCTCTGCTGGATGCTGTACGGTCTGAACTAATCGCTTCAAAA GAGGCTTTCTCCTCCTCTCGAAAACAGATAGAAGATCAAGCAGTGCAGATGCAGAAACAA GTTCAAGAACTCTCTGGTCAAAGGCTATTGCTTTCATCTTTCAACCAGAACTTGGAAGCT GCTCGGTTGGAGATTCAAGGCAAGGCAAAGGAGCTCAATGCTGCACAGTCTCGCTGTCAT GAACTTGAATCACTGTTACTTCAGGAAAAGGAGAAGGTTGAGTCTCTGGAAGCAGTGTTA ACAAAAGAAAGAGAGAGCTTAGAAGAGAAAACCAAAGAAGTTGAGTTGCTTCAAAAGGCG CTCGTTCAGAAGGAAAATGAGCACAGCAATTCATTAAAGCTTGTTGAAATAAAAGAATCT GAGCTGTTAGAAGCCCGAAATGAAGTCCAAGATATGAAATCAAAGGTGGAATCTATCCAA ATAGCTGTTCAGGAGAAGGATTCAGAGCTTTCTGAAACACAACGCAGACTTGCTGAAGTG AACAGTGAAGTTGTTGAACTAAAGCAGCTGCTAGATAGCAAGGAAGATCAACTTGTTCAG GTTAGAACCGAATTACAGGATAAAGAACAACACATACAGACACTACAGAATAAATTGGAT AGCATGAAATTCAGTTGCTCACAAGCTGAATCTGTGGTGCAAAAGATAGCTGAACTCACT GGCAATCTTGCTAGTTCAGTAGAAGGCGAAGAGATGGACATTTATGCATTGCTGGATGAT GAGATTTCGAGCACAGGTACAGCCCTCAAGTCCAATTTGCACAAGCATAATCAACTGGAG GCTGACATAGAGATGTTAAAAGAATCCTTGCATCAGAAGGACATGGATTTAAGAGCTGCC CATGAAGCACTTGACGCGAAAGATCAAGAGCTGAAGGCGGTAATGAGAAGGTGGGATGTG AAGGAGGAGGTAGACAAGTTGGAAGGGTTCCTGAAAGATCCTAGTGACATCAAGAGACCT TCTGATTTTTCCGTTCATATGGGGCTCCAAAATCTTCAAACTGAAGCTGCGGAGGTGGAG GCACTTGCTGCTACTACTACATTGAAGAAACTTGCAGATATGGCTAAGGGATTCCTGAGA AGTGGCAAAACTGATTCTGGCATCAATCTGGTTGCATCGCCAAGTGTAAACAGTACTAGA ATTGTTTCCAAGACCAAACCAAACAAGGAAATGGATATGATTCTTGATGCTGAAAAGGAA ATTGCCGGGCTCTTTTCGTTGACAGAACAGCTCATTACCGAGGCTGGAATAGATGTTGCT CACCAAGCATAG

Peptide Sequence

PEP ID	Os02t0186400-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:4803290:4806457:-1 gene:Os02g0186400 transcript:Os02t0186400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Spectrin repeat containing protein. (Os02t0186400-01)
Sequence	MPPLSPSSSPPATAAAVLRCGSPSCRPVTHELFRQKLSFMVSFQAQHMRCAPHLIKSVVK GIRANITDGENGATEPARELLERLFAKTQRLDTSASQDSELSMSIDVLKSEFEAALSTLR KKERDLRDAENRVSVDQVRLNRAKKDLDQRERGINRAYARQQEMERSLGKASRDLVLQVR QIDNLKLLVDEQDKKIASSQDLLSQKVTEVEKLKQDMLKKNEEVTLMRSEIKSKEQLLLE ANQAAEQQEATIKELRSEIKRKEIDFSRSNELRKANEQKLKIAEQELERQNMGWLAAQKE LKEVAQLACKDMDGIKDTVSDFKRVRSLLDAVRSELIASKEAFSSSRKQIEDQAVQMQKQ VQELSGQRLLLSSFNQNLEAARLEIQGKAKELNAAQSRCHELESLLLQEKEKVESLEAVL TKERESLEEKTKEVELLQKALVQKENEHSNSLKLVEIKESELLEARNEVQDMKSKVESIQ IAVQEKDSELSETQRRLAEVNSEVVELKQLLDSKEDQLVQVRTELQDKEQHIQTLQNKLD SMKFSCSQAESVVQKIAELTGNLASSVEGEEMDIYALLDDEISSTGTALKSNLHKHNQLE ADIEMLKESLHQKDMDLRAAHEALDAKDQELKAVMRRWDVKEEVDKLEGFLKDPSDIKRP SDFSVHMGLQNLQTEAAEVEALAATTTLKKLADMAKGFLRSGKTDSGINLVASPSVNSTR IVSKTKPNKEMDMILDAEKEIAGLFSLTEQLITEAGIDVAHQA

Transcript Sequence

Transcript ID	Os02t0186400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:4803290:4806457:-1 gene:Os02g0186400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Spectrin repeat containing protein. (Os02t0186400-01)
Sequence	AGTCCACACGCGTCCGGTTCGGCCTCCACATCATCATCTCCTCTCCTCTCTCGTCTCCGC GCGCCGTGAGCCGTCCGATCTCGCGCGGGCGGCCGTGATCCGCTCCCTCCCCCCCACCCA CGTGCTAGGCCGCCATGCCACCCCTCTCCCCTTCCTCCTCGCCGCCGGCGACGGCGGCGG CGGTTCTCCGCTGCGGCTCCCCGTCGTGCCGCCCCGTCACACATGAGCTGTTCAGGCAGA AGTTGAGTTTCATGGTGTCATTTCAAGCTCAACATATGAGATGTGCTCCTCATTTGATCA AATCAGTTGTTAAAGGTATTAGAGCAAATATCACTGATGGCGAGAATGGAGCAACTGAAC CAGCTAGGGAGCTATTGGAGCGGCTGTTTGCGAAGACGCAAAGGTTGGATACCAGTGCTT CCCAGGATAGTGAGCTGAGTATGAGCATTGATGTACTGAAGTCTGAATTTGAGGCCGCCT TGTCTACCTTGAGGAAGAAAGAGAGGGATCTCCGAGATGCGGAGAATCGGGTTTCAGTTG ATCAGGTACGCCTGAACCGGGCGAAGAAGGATCTTGATCAGAGAGAGCGTGGGATCAATA GAGCATATGCAAGGCAACAGGAAATGGAGAGATCACTGGGTAAGGCAAGTAGAGATCTGG TTTTACAAGTGAGGCAGATCGATAACCTGAAGCTTCTTGTTGATGAGCAAGACAAGAAAA TTGCCAGCTCACAAGATTTGCTTTCTCAGAAGGTAACTGAAGTGGAAAAGCTTAAGCAAG ATATGTTGAAGAAGAATGAAGAAGTAACCTTGATGCGTTCAGAGATCAAGTCCAAGGAAC AGCTGCTTCTTGAAGCTAATCAGGCTGCTGAGCAGCAAGAAGCAACAATTAAGGAGCTCC GGAGTGAAATTAAAAGAAAAGAAATTGATTTTTCCAGATCGAATGAATTGAGAAAGGCCA ATGAACAGAAACTAAAAATCGCCGAGCAAGAACTTGAGAGGCAGAATATGGGATGGTTAG CAGCACAGAAAGAGTTAAAGGAAGTGGCGCAACTAGCATGCAAGGATATGGATGGTATCA AGGATACAGTCAGTGACTTCAAACGTGTGAGGTCTCTGCTGGATGCTGTACGGTCTGAAC TAATCGCTTCAAAAGAGGCTTTCTCCTCCTCTCGAAAACAGATAGAAGATCAAGCAGTGC AGATGCAGAAACAAGTTCAAGAACTCTCTGGTCAAAGGCTATTGCTTTCATCTTTCAACC AGAACTTGGAAGCTGCTCGGTTGGAGATTCAAGGCAAGGCAAAGGAGCTCAATGCTGCAC AGTCTCGCTGTCATGAACTTGAATCACTGTTACTTCAGGAAAAGGAGAAGGTTGAGTCTC TGGAAGCAGTGTTAACAAAAGAAAGAGAGAGCTTAGAAGAGAAAACCAAAGAAGTTGAGT TGCTTCAAAAGGCGCTCGTTCAGAAGGAAAATGAGCACAGCAATTCATTAAAGCTTGTTG AAATAAAAGAATCTGAGCTGTTAGAAGCCCGAAATGAAGTCCAAGATATGAAATCAAAGG TGGAATCTATCCAAATAGCTGTTCAGGAGAAGGATTCAGAGCTTTCTGAAACACAACGCA GACTTGCTGAAGTGAACAGTGAAGTTGTTGAACTAAAGCAGCTGCTAGATAGCAAGGAAG ATCAACTTGTTCAGGTTAGAACCGAATTACAGGATAAAGAACAACACATACAGACACTAC AGAATAAATTGGATAGCATGAAATTCAGTTGCTCACAAGCTGAATCTGTGGTGCAAAAGA TAGCTGAACTCACTGGCAATCTTGCTAGTTCAGTAGAAGGCGAAGAGATGGACATTTATG CATTGCTGGATGATGAGATTTCGAGCACAGGTACAGCCCTCAAGTCCAATTTGCACAAGC ATAATCAACTGGAGGCTGACATAGAGATGTTAAAAGAATCCTTGCATCAGAAGGACATGG ATTTAAGAGCTGCCCATGAAGCACTTGACGCGAAAGATCAAGAGCTGAAGGCGGTAATGA GAAGGTGGGATGTGAAGGAGGAGGTAGACAAGTTGGAAGGGTTCCTGAAAGATCCTAGTG ACATCAAGAGACCTTCTGATTTTTCCGTTCATATGGGGCTCCAAAATCTTCAAACTGAAG CTGCGGAGGTGGAGGCACTTGCTGCTACTACTACATTGAAGAAACTTGCAGATATGGCTA AGGGATTCCTGAGAAGTGGCAAAACTGATTCTGGCATCAATCTGGTTGCATCGCCAAGTG TAAACAGTACTAGAATTGTTTCCAAGACCAAACCAAACAAGGAAATGGATATGATTCTTG ATGCTGAAAAGGAAATTGCCGGGCTCTTTTCGTTGACAGAACAGCTCATTACCGAGGCTG GAATAGATGTTGCTCACCAAGCATAGCTTCAGAACCCAGAAATGTATATCATATTGCAGT TTTGCAACATTTAGATAGTTGCTGTGAAGATTCAGCTGAAATTGTTAGCGTTTTCATTTC TTTTGCTTTGGGTCTCATCGCCCTGTTTGCTGTTGGATTGCTCTGCTCCAAGTGCGAAAG GGAGACATCGATGTTGATATGCC