Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0183000-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:4639932:4641686:-1 gene:Os02g0183000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF597 domain containing protein. (Os02t0183000-00)
Sequence

ATGATCATGCAGGCTATGTGGAAGCCAGCATGGTTAGAGGCCCTGAACACACAGAAGTTC
TTCATAGCATGCTCTTTCCATGAGCATGCGAAGAAGAATGAGAAGAACATCTGTTGCCTT
GACTGCTGCACCAGCATCTGCCCACACTGTGTGGCAGCACACCGTGTGCACAGGCTACTG
CAGGTGCGGCGCTACGTCTACCATGATGTTGTCCGGCTGGAGGACCTTGAGAAGCTGATC
GATTGCTCCAGTGTTCAGTCATACACAATTAACAGCTCAAAGGTCGTTTTCCTGAAGAAA
AGACCACAGAACAGGCAATTTAAAGGGTCAGGGAATATCTGCACCTCTTGCGATAGAAGC
CTCCAAGAACCCTATTTCCACTGCTCTCTGGATTGCAAGGTGGAATATATATTACGGCAA
AAGAAAGACCTGTCAGCATACTTGCGTCCATGCAAGACCTTGCAGCTTGGTCCAGATTTC
TTCATTCCTCATGATGCTGATGATGAGACAACGCACTCAACCCTTGTTGATGTTGACGAG
CCCATGGGATCATCAGACTCAGAGAATTTGAGTGCACCATGCCCAAATTTTGTCCGAAAG
AAGCGGAGTGGACCATATATCTGTGCACGATCTGCAAACCGAGTTTCTGATGATGATATG
GCAACAAACATGAGCAGAAGAAAAGGTGTTCCTCATAGATCACCTTTGTGCTGA

Peptide Sequence

PEP ID

Os02t0183000-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:4639932:4641686:-1 gene:Os02g0183000 transcript:Os02t0183000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF597 domain containing protein. (Os02t0183000-00)
Sequence

MIMQAMWKPAWLEALNTQKFFIACSFHEHAKKNEKNICCLDCCTSICPHCVAAHRVHRLL
QVRRYVYHDVVRLEDLEKLIDCSSVQSYTINSSKVVFLKKRPQNRQFKGSGNICTSCDRS
LQEPYFHCSLDCKVEYILRQKKDLSAYLRPCKTLQLGPDFFIPHDADDETTHSTLVDVDE
PMGSSDSENLSAPCPNFVRKKRSGPYICARSANRVSDDDMATNMSRRKGVPHRSPLC

Transcript Sequence

Transcript ID

Os02t0183000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:4639932:4641686:-1 gene:Os02g0183000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF597 domain containing protein. (Os02t0183000-00)
Sequence

CCCACTAAACACCCCCTCCTCTCATCCTTCATAAGTTGTACGTATCCTCCTTCCTCACAG
CACCTCACCCTCACCCTCACCCAGCCAAAACCACACACAACACCAAAGGATTTCACATCA
ACAACACACATGATCATGCAGGCTATGTGGAAGCCAGCATGGTTAGAGGCCCTGAACACA
CAGAAGTTCTTCATAGCATGCTCTTTCCATGAGCATGCGAAGAAGAATGAGAAGAACATC
TGTTGCCTTGACTGCTGCACCAGCATCTGCCCACACTGTGTGGCAGCACACCGTGTGCAC
AGGCTACTGCAGGTGCGGCGCTACGTCTACCATGATGTTGTCCGGCTGGAGGACCTTGAG
AAGCTGATCGATTGCTCCAGTGTTCAGTCATACACAATTAACAGCTCAAAGGTCGTTTTC
CTGAAGAAAAGACCACAGAACAGGCAATTTAAAGGGTCAGGGAATATCTGCACCTCTTGC
GATAGAAGCCTCCAAGAACCCTATTTCCACTGCTCTCTGGATTGCAAGGTGGAATATATA
TTACGGCAAAAGAAAGACCTGTCAGCATACTTGCGTCCATGCAAGACCTTGCAGCTTGGT
CCAGATTTCTTCATTCCTCATGATGCTGATGATGAGACAACGCACTCAACCCTTGTTGAT
GTTGACGAGCCCATGGGATCATCAGACTCAGAGAATTTGAGTGCACCATGCCCAAATTTT
GTCCGAAAGAAGCGGAGTGGACCATATATCTGTGCACGATCTGCAAACCGAGTTTCTGAT
GATGATATGGCAACAAACATGAGCAGAAGAAAAGGTGTTCCTCATAGATCACCTTTGTGC
TGATAAAAGATCAATAATTAAATAGTTTTTTTCCCTTTTTTTTGCTTTTTTTGAGTTCTT
TATCTCTTGGACAAAGCTGGTGCACTATTGACAGAATTTTGTCTCCATGGAACCCTGTGA
TTTCAATGTACATCACCAGAGGCAATTGTACTCAAATTCTTCATGTAGATGCACCAGTTC
ATATATATGTACGCCTTAAAATAGTTCATATTATCCCCTTTCT