Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0182800-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:4625425:4628750:1 gene:Os02g0182800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX ORYZA SATIVA 58 description:Similar to NTH23 protein. (Os02t0182800-01)
Sequence

ATGGCGTTCCACTACCCGGACCACGGCCTCGCCATGGACCCGTCCTCCGCCGCGGCGTCG
TCGCCCAACCCTAGCTTCTCCCCCGGAGGCGGGGGCGGGGGCGGGGTCGGGGGAGGGGAG
AGGGAGAAGGCGGCCGTCGCGGCGCACCCGCTCTACGAGCGCCTGCTCGAGGCGCACGTC
GCCTGCCTCCGCGTCGCCACCCCCGTGGACCAGCTCCCCCGCATCGACGCGCAGATCGCC
GCGCGCCCGCCTCCCCTCGCAGCCGCCTCCGCCGCCGCCGCCGCCGGTGGCCCCTCCGGT
GGCGAGGAGCTCGACCTCTTCATGACACATTATGTGTTGCTTCTTTGCTCATTCAAGGAA
CAACTTCAGCAGCATGTGCGTGTTCATGCAATGGAAGCAGTGATGGGGTGCTGGGAACTT
GAACAGTCTTTACAAAGTCTAACAGGGGCATCTCCTGGTGAAGGGACTGGAGCGACTATG
TCTGATGATGAAGATAACCAAGTGGACAGTGAAGCCAACATGTTTGATGGAAATGATGGG
TCAGACGGCATGGGCTTTGGTCCCTTAATGCTGACCGAGGGTGAAAGATCCTTGGTTGAG
CGTGTACGGCATGAGCTGAAGAACGAGCTTAAGCAGGGGTACAAAGAAAAGCTTGTGGAT
ATTAGGGAAGAGATCCTTCGCAAGCGGAGAGCTGGTAAACTTCCTGGTGATACTGCATCT
ATACTAAAAGCTTGGTGGCAAGCTCATTCTAAGTGGCCATACCCAACTGAAGACGACAAG
GCCCGCCTGGTGCAGGAAACGGGGTTACAACTGAAGCAAATCAACAATTGGTTCATTAAC
CAACGCAAACGAAACTGGCATAGCAACCCAGCATCCTCTGGTGAAAAGACCAAGAAGAAA
AGAAACGTTACAGGTGATGGTGGTGCTGAGCAATCGTGGTAG

Peptide Sequence

PEP ID

Os02t0182800-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:4625425:4628750:1 gene:Os02g0182800 transcript:Os02t0182800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX ORYZA SATIVA 58 description:Similar to NTH23 protein. (Os02t0182800-01)
Sequence

MAFHYPDHGLAMDPSSAAASSPNPSFSPGGGGGGGVGGGEREKAAVAAHPLYERLLEAHV
ACLRVATPVDQLPRIDAQIAARPPPLAAASAAAAAGGPSGGEELDLFMTHYVLLLCSFKE
QLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGATMSDDEDNQVDSEANMFDGNDG
SDGMGFGPLMLTEGERSLVERVRHELKNELKQGYKEKLVDIREEILRKRRAGKLPGDTAS
ILKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSNPASSGEKTKKK
RNVTGDGGAEQSW

Transcript Sequence

Transcript ID

Os02t0182800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:4625425:4628750:1 gene:Os02g0182800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX ORYZA SATIVA 58 description:Similar to NTH23 protein. (Os02t0182800-01)
Sequence

GTCATCCGCTCTTCTTCCCCTCTTCCCCACTCGCACCAACCCCAACCCCCCCAACCGCCG
CCGCCGCCGCCGACGACCCACCGGTCGCCGCGTCGCCGGAGTCGCGTACTGGAGAGGGGG
GCGGAGAGGCACCAGCCGCCCCATGGCGTTCCACTACCCGGACCACGGCCTCGCCATGGA
CCCGTCCTCCGCCGCGGCGTCGTCGCCCAACCCTAGCTTCTCCCCCGGAGGCGGGGGCGG
GGGCGGGGTCGGGGGAGGGGAGAGGGAGAAGGCGGCCGTCGCGGCGCACCCGCTCTACGA
GCGCCTGCTCGAGGCGCACGTCGCCTGCCTCCGCGTCGCCACCCCCGTGGACCAGCTCCC
CCGCATCGACGCGCAGATCGCCGCGCGCCCGCCTCCCCTCGCAGCCGCCTCCGCCGCCGC
CGCCGCCGGTGGCCCCTCCGGTGGCGAGGAGCTCGACCTCTTCATGACACATTATGTGTT
GCTTCTTTGCTCATTCAAGGAACAACTTCAGCAGCATGTGCGTGTTCATGCAATGGAAGC
AGTGATGGGGTGCTGGGAACTTGAACAGTCTTTACAAAGTCTAACAGGGGCATCTCCTGG
TGAAGGGACTGGAGCGACTATGTCTGATGATGAAGATAACCAAGTGGACAGTGAAGCCAA
CATGTTTGATGGAAATGATGGGTCAGACGGCATGGGCTTTGGTCCCTTAATGCTGACCGA
GGGTGAAAGATCCTTGGTTGAGCGTGTACGGCATGAGCTGAAGAACGAGCTTAAGCAGGG
GTACAAAGAAAAGCTTGTGGATATTAGGGAAGAGATCCTTCGCAAGCGGAGAGCTGGTAA
ACTTCCTGGTGATACTGCATCTATACTAAAAGCTTGGTGGCAAGCTCATTCTAAGTGGCC
ATACCCAACTGAAGACGACAAGGCCCGCCTGGTGCAGGAAACGGGGTTACAACTGAAGCA
AATCAACAATTGGTTCATTAACCAACGCAAACGAAACTGGCATAGCAACCCAGCATCCTC
TGGTGAAAAGACCAAGAAGAAAAGAAACGTTACAGGTGATGGTGGTGCTGAGCAATCGTG
GTAGATTGGTTCAACATGAAACTAGATGTAAACAGTACCTTTTATTGTGAAGAGTGTAGT
ACATTCTCTCGTGCTCTGGTGTGACAAAATCTGGAGACCGGCCCATTCACAAGGGAATTG
CGATCATAGGCGTAATCACTGGGCAAAGAAGTCATCTGAAATTGTAGCATAAGCGCACAA
AACTGAGGTGGGTGGTATTTGACTTTCGCAGTATAGCATCGACTGTCTGCTAATGTGATT
TTGTGAAGGAATGTTCTGTATAACCGATGAACGGAAGGAAGAATTGTATTGTGTATGTAA
TTGTGTATCTTATTTATCATGTAATATATATATGATATTAGGAGCTTT