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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0182500-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:4598883:4601382:-1 gene:Os02g0182500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Proteasome subunit beta type 3 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit beta-3). (Os02t0182500-01)
Sequence

ATGTCGATCTTCGAGTACAACGGGAGCGCCGTGGTGGCGATGGTGGGGAAGAACTGCTTC
GCGATCGCCAGCGACCGGCGCCTCGGGGTGCAGCTGCAGACGGTCGCCACCGACTTCCAG
AGGGTGTTCAAGATCCACGACAAGCTCTACATCGGCCTCTCCGGCCTCGCCACCGACGCC
CAGACGCTGTACCAGCGGCTGGTGTTCAGGCACAAACTGTACCAGCTGAGGGAGGAGAGG
GACATGAAGCCCCAGGCATTCGCTAGCCTCGTCTCCGCGCTCCTCTACGAGAAGAGGTTT
GGGCCGTACTTCTGCCAACCAGTTATTGCTGGATTAGGAGATAATGATGAGCCATTTATA
TGTACCATGGATTGCATTGGTGCCAAGGAACTAGCGAAAGATTTTGTGGTTTCTGGCACT
GCTTCAGAATCACTATATGGTGCTTGTGAGTCCATGTATAAGCCAAGCATGGAACCGGAA
GAACTATTCGAGACGATCTCACAAGCGCTGCAGGCTTCTGTTGATCGAGATTGCCTGAGT
GGCTGGGGTGGTTATGTTCTCCTTGTGACTCCCACAGAGGTTCAGGAGAGAGTGATCAAG
GGAAGGATGGACTGA

Peptide Sequence

PEP ID

Os02t0182500-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:4598883:4601382:-1 gene:Os02g0182500 transcript:Os02t0182500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Proteasome subunit beta type 3 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit beta-3). (Os02t0182500-01)
Sequence

MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDA
QTLYQRLVFRHKLYQLREERDMKPQAFASLVSALLYEKRFGPYFCQPVIAGLGDNDEPFI
CTMDCIGAKELAKDFVVSGTASESLYGACESMYKPSMEPEELFETISQALQASVDRDCLS
GWGGYVLLVTPTEVQERVIKGRMD

Transcript Sequence

Transcript ID

Os02t0182500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:4598883:4601382:-1 gene:Os02g0182500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Proteasome subunit beta type 3 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit beta-3). (Os02t0182500-01)
Sequence

AATTATTTTTTTTCTCTCGCTCGCCGGAGACCAACCGGAATCGCCGCGCGCCGCCGCCGC
CGCCTCCTCGCCGTCCGCCGCAGCCGTCGAGCCCATCGGCGCCGGTCATGTCGATCTTCG
AGTACAACGGGAGCGCCGTGGTGGCGATGGTGGGGAAGAACTGCTTCGCGATCGCCAGCG
ACCGGCGCCTCGGGGTGCAGCTGCAGACGGTCGCCACCGACTTCCAGAGGGTGTTCAAGA
TCCACGACAAGCTCTACATCGGCCTCTCCGGCCTCGCCACCGACGCCCAGACGCTGTACC
AGCGGCTGGTGTTCAGGCACAAACTGTACCAGCTGAGGGAGGAGAGGGACATGAAGCCCC
AGGCATTCGCTAGCCTCGTCTCCGCGCTCCTCTACGAGAAGAGGTTTGGGCCGTACTTCT
GCCAACCAGTTATTGCTGGATTAGGAGATAATGATGAGCCATTTATATGTACCATGGATT
GCATTGGTGCCAAGGAACTAGCGAAAGATTTTGTGGTTTCTGGCACTGCTTCAGAATCAC
TATATGGTGCTTGTGAGTCCATGTATAAGCCAAGCATGGAACCGGAAGAACTATTCGAGA
CGATCTCACAAGCGCTGCAGGCTTCTGTTGATCGAGATTGCCTGAGTGGCTGGGGTGGTT
ATGTTCTCCTTGTGACTCCCACAGAGGTTCAGGAGAGAGTGATCAAGGGAAGGATGGACT
GAGTGCTCGCCCGTAGACCTAGATCGCGTAGGGGATGGTTCGTTCGTTCGATCGATCGAT
TATCCTGTACAACTGCCTACAGAACTAGGAAAACATGTGTGGTCTATTTACTTCTCAAGA
AACATCACAGCATGAATGGTATCACCGTTGATTCCTT