Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0181900-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:4567630:4573049:-1 gene:Os02g0181900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CLASS I CLP ATPASE B-M description:Similar to ClpB. (Os02t0181900-01)
Sequence

ATGTCACGCGCCACCGCCGTGTCCAGGCTCGCGCGCGCCGCCCGCGCCGCGGCGGCGGCG
CGGCGCCACCACGCTGGCGGCCGGGACCCGCTCCGCGCCCTCGCGTCGCTCGCTGGAGAC
GCTTCCGCTTCCGCTGGTGGTGGGGCGAGGAGGCCCGCGTGGTTCGCGCCGCCCATGGGC
CGGCTCGGTGGAGGCGGGCTGCTGGTTCCGCCGCCGCCGCCGCAGCGGAGGCTGTTCCAC
CCCACGCAGGCGGCGAGGTACAGCACCTCGTCGTCGTCTCAGATAACTCCAGGAGAATTT
ACTGAGATGGCCTGGGAGGGGGTTGTCGGCGCGGTTGATGCAGCTAGAATGTCGAAGCAA
CAAGTAGTGGAAGCAGAGCACCTGATGAAAGCTCTTCTGGAGCAGAAGGATGGTTTAGCG
CGCAGAATATTTTCGAAAGCTGGAATAGATAACACATCTGTCCTGCAAGCTACTGATGAG
TTCATCTCGAGACAGCCAAAGGTTGTTGGCGATACAAGTGGACCGATCATTGGGTCAAGC
TTTGTATCAATTTTGGATAATGCAAGGAAGCATAAGAAAGAATATGCTGATGAGTTTGTA
TCTGTTGAGCACATATTGCGAGCATTCACAGAAGATAAGAGGTTTGGACAACAGCTGTTC
AGAGATCTCAAAATTGGGGAGAATGAGTTGAAGGAAGCTATCTCCGCTGTACGTGGCAGT
CAGCGGGTCACAGATCAGAATCCGGAGGGGAAGTACCAGGCTCTAGAGAAGTATGGTATT
GACATGACAGAATTAGCTCGACGTGGAAAACTGGATCCTGTTATTGGCCGTGATGATGAA
GTGCGACGATGCATTCAGATCCTTTGCAGGAGAACTAAGAATAATCCTGTAATTATTGGT
GAGCCAGGAGTCGGCAAAACTGCTATCGCTGAAGGATTGGCACAGCGTATTGTGCGGGGA
GATGTTCCTGAACCTTTACAGAATAGAAAGCTTATTTCATTGGACATGGGAGCATTACTT
GCTGGGGCTAAATTCCAAGGTCAATTTGAAGAGAGACTTAAGGCTGTTCTGAAGGAGATC
ACTGCCTCGAATGGGCAGATCATCTTGTTCATTGATGAGATCCACACTATTGTTGGTGCA
GGAGCAGCAGGTGGGGCAATGGATGCTGGTAATTTGCTGAAGCCAATGTTAGGTCGGGGT
GAACTCCGTTGCATTGGAGCAACAACACTAGATGAGTACAGGAAGTACATTGAGAAGGAT
GCTGCTCTGGAGCGTAGGTTCCAGCAGGTTTATTGTGGTGAGCCAGCAGTTGAGGATACA
ATCTCTATACTGCGTGGCCTAAGAGAGCGGTATGAACTGCACCATGGTGTCAAAATATCA
GATGGAGCTCTTGTTTCTGCGGCTGTTTTATCAGATCGCTACATCACTGGACGTTTTTTG
CCTGATAAAGCTATTGACCTAGTTGATGAAGCAGCTGCTAAGCTGAAAATGGAGATAACA
TCGAAACCTATTGAATTGGATGAGGTAGATAGGGAAATCATAAGGCTTGAAATGGAGAAG
CTCTCATTGAAGAATGATACCGATAAAGCCTCCAAACAGCGACTGAGCAAGCTTGAAGCT
GATCTAGAATCTCTGAAGCAGAAGCAGAAAAACCTTTCAGAACATTGGGAATATGAGAAG
TCCTTGATGACTCGCATAAGATCGATCAAGGAAGAGACTGACAGAGTTAACCTGGAGATT
GAAGCTGCTGAGAGAGAGTATGATTTGAACCGTGCAGCTGAGCTCAAGTACGGAACACTT
CTGTCGCTACAAAAACAGCTTGAAGAGGCTGAGAACAAACTCATGGAATTCCAGCAGTCA
GGCAAGTCAATGCTTCGAGAAGAGGTGACTGATGTTGACATTGCTGAGATTGTTAGCAAG
TGGACTGGTATTCCAGTGTCAAACCTTCAACAATCTGAAAAGGAAAAGCTACTGCTATTG
GAAGATGTACTCCACAAGAGGGTTATTGGCCAAGATATTGCAGTGAAGTCAGTGGCTAAT
GCAATCCGTCGTTCTAGGGCAGGCCTATCAGACCCTAACCGTCCCATAGCAAGCTTAATG
TTTATGGGTCCAACAGGTGTAGGAAAGACCGAACTGGGGAAAACACTAGCTGAATTCCTT
TTCAACACAGAGAATGCTCTAATACGGATTGATATGAGCGAGTACATGGAAAAGCATGCC
GTCTCCCGTTTGGTTGGAGCCCCTCCTGGCTATATTGGTTATGGGGAAGGGGGCCAACTG
ACAGAAGCTGTTCGTCGTAGGCCTTATTCTGTGGTTCTTTTCGATGAAATTGAGAAAGCG
CACCAGGATGTGTTCAACATCTTATTGCAACTTTTGGATGATGGAAGAATAACCGACTCT
CAGGGCAGAACAGTCAGCTTTACTAACTGTGTTATCATCATGACTTCAAACATTGGGTCG
CCATTGATTCTTGATACGCTTAGAAACACATCAGACAGCAAGGAGGCAGTTTATGAAATA
ATGAAGAAGCAAGTGATTGACATGGCTCGGCAGTCATTCCGGCCAGAGTTTTTGAATAGG
ATAGATGAGTACATTGTATTCCAGCCGCTGGACACCACAGAGATAAATCGCATCGTGGAG
ATCCAGCTGAACCGAGTCAAGAACCGGCTGAGGCAACAGAAGATTCATCTGCAGTACACA
CCAGAAGCTGTGGAGCATCTTGGCTCTCTCGGCTTTGACCCTAACTACGGTGCTAGGCCT
GTGAAGAGGGTGATCCAGCAGATGGTAGAGAACGAGATCGCCCTCAGTGTCCTGAAGGGC
GACTTCAAAGAAGACGACACCGTCCTCGTCGACGTGAGCTCCGTGGCGATCGCGAAAGGC
CTTGCTCCACAGAAGAAGCTTGTCCTCCAGAGGTTAGAGAATGCAAACTTAGAGTTAGTC
GCCAATGACTAG

Peptide Sequence

PEP ID

Os02t0181900-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:4567630:4573049:-1 gene:Os02g0181900 transcript:Os02t0181900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CLASS I CLP ATPASE B-M description:Similar to ClpB. (Os02t0181900-01)
Sequence

MSRATAVSRLARAARAAAAARRHHAGGRDPLRALASLAGDASASAGGGARRPAWFAPPMG
RLGGGGLLVPPPPPQRRLFHPTQAARYSTSSSSQITPGEFTEMAWEGVVGAVDAARMSKQ
QVVEAEHLMKALLEQKDGLARRIFSKAGIDNTSVLQATDEFISRQPKVVGDTSGPIIGSS
FVSILDNARKHKKEYADEFVSVEHILRAFTEDKRFGQQLFRDLKIGENELKEAISAVRGS
QRVTDQNPEGKYQALEKYGIDMTELARRGKLDPVIGRDDEVRRCIQILCRRTKNNPVIIG
EPGVGKTAIAEGLAQRIVRGDVPEPLQNRKLISLDMGALLAGAKFQGQFEERLKAVLKEI
TASNGQIILFIDEIHTIVGAGAAGGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKD
AALERRFQQVYCGEPAVEDTISILRGLRERYELHHGVKISDGALVSAAVLSDRYITGRFL
PDKAIDLVDEAAAKLKMEITSKPIELDEVDREIIRLEMEKLSLKNDTDKASKQRLSKLEA
DLESLKQKQKNLSEHWEYEKSLMTRIRSIKEETDRVNLEIEAAEREYDLNRAAELKYGTL
LSLQKQLEEAENKLMEFQQSGKSMLREEVTDVDIAEIVSKWTGIPVSNLQQSEKEKLLLL
EDVLHKRVIGQDIAVKSVANAIRRSRAGLSDPNRPIASLMFMGPTGVGKTELGKTLAEFL
FNTENALIRIDMSEYMEKHAVSRLVGAPPGYIGYGEGGQLTEAVRRRPYSVVLFDEIEKA
HQDVFNILLQLLDDGRITDSQGRTVSFTNCVIIMTSNIGSPLILDTLRNTSDSKEAVYEI
MKKQVIDMARQSFRPEFLNRIDEYIVFQPLDTTEINRIVEIQLNRVKNRLRQQKIHLQYT
PEAVEHLGSLGFDPNYGARPVKRVIQQMVENEIALSVLKGDFKEDDTVLVDVSSVAIAKG
LAPQKKLVLQRLENANLELVAND

Transcript Sequence

Transcript ID

Os02t0181900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:4567630:4573049:-1 gene:Os02g0181900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CLASS I CLP ATPASE B-M description:Similar to ClpB. (Os02t0181900-01)
Sequence

CCCCTTCTCCAAGCATCGCCACCCTTCGCCGCCGCCGCCCTAAAATCGCCGCGAGAGCGC
GCGCGCTTCTCCCACCCGGCGACCCTGAGAGTCCGAGGCGCCATTGAACCCCTGACCCCC
CCACCCGCTCGCCACGATGTCACGCGCCACCGCCGTGTCCAGGCTCGCGCGCGCCGCCCG
CGCCGCGGCGGCGGCGCGGCGCCACCACGCTGGCGGCCGGGACCCGCTCCGCGCCCTCGC
GTCGCTCGCTGGAGACGCTTCCGCTTCCGCTGGTGGTGGGGCGAGGAGGCCCGCGTGGTT
CGCGCCGCCCATGGGCCGGCTCGGTGGAGGCGGGCTGCTGGTTCCGCCGCCGCCGCCGCA
GCGGAGGCTGTTCCACCCCACGCAGGCGGCGAGGTACAGCACCTCGTCGTCGTCTCAGAT
AACTCCAGGAGAATTTACTGAGATGGCCTGGGAGGGGGTTGTCGGCGCGGTTGATGCAGC
TAGAATGTCGAAGCAACAAGTAGTGGAAGCAGAGCACCTGATGAAAGCTCTTCTGGAGCA
GAAGGATGGTTTAGCGCGCAGAATATTTTCGAAAGCTGGAATAGATAACACATCTGTCCT
GCAAGCTACTGATGAGTTCATCTCGAGACAGCCAAAGGTTGTTGGCGATACAAGTGGACC
GATCATTGGGTCAAGCTTTGTATCAATTTTGGATAATGCAAGGAAGCATAAGAAAGAATA
TGCTGATGAGTTTGTATCTGTTGAGCACATATTGCGAGCATTCACAGAAGATAAGAGGTT
TGGACAACAGCTGTTCAGAGATCTCAAAATTGGGGAGAATGAGTTGAAGGAAGCTATCTC
CGCTGTACGTGGCAGTCAGCGGGTCACAGATCAGAATCCGGAGGGGAAGTACCAGGCTCT
AGAGAAGTATGGTATTGACATGACAGAATTAGCTCGACGTGGAAAACTGGATCCTGTTAT
TGGCCGTGATGATGAAGTGCGACGATGCATTCAGATCCTTTGCAGGAGAACTAAGAATAA
TCCTGTAATTATTGGTGAGCCAGGAGTCGGCAAAACTGCTATCGCTGAAGGATTGGCACA
GCGTATTGTGCGGGGAGATGTTCCTGAACCTTTACAGAATAGAAAGCTTATTTCATTGGA
CATGGGAGCATTACTTGCTGGGGCTAAATTCCAAGGTCAATTTGAAGAGAGACTTAAGGC
TGTTCTGAAGGAGATCACTGCCTCGAATGGGCAGATCATCTTGTTCATTGATGAGATCCA
CACTATTGTTGGTGCAGGAGCAGCAGGTGGGGCAATGGATGCTGGTAATTTGCTGAAGCC
AATGTTAGGTCGGGGTGAACTCCGTTGCATTGGAGCAACAACACTAGATGAGTACAGGAA
GTACATTGAGAAGGATGCTGCTCTGGAGCGTAGGTTCCAGCAGGTTTATTGTGGTGAGCC
AGCAGTTGAGGATACAATCTCTATACTGCGTGGCCTAAGAGAGCGGTATGAACTGCACCA
TGGTGTCAAAATATCAGATGGAGCTCTTGTTTCTGCGGCTGTTTTATCAGATCGCTACAT
CACTGGACGTTTTTTGCCTGATAAAGCTATTGACCTAGTTGATGAAGCAGCTGCTAAGCT
GAAAATGGAGATAACATCGAAACCTATTGAATTGGATGAGGTAGATAGGGAAATCATAAG
GCTTGAAATGGAGAAGCTCTCATTGAAGAATGATACCGATAAAGCCTCCAAACAGCGACT
GAGCAAGCTTGAAGCTGATCTAGAATCTCTGAAGCAGAAGCAGAAAAACCTTTCAGAACA
TTGGGAATATGAGAAGTCCTTGATGACTCGCATAAGATCGATCAAGGAAGAGACTGACAG
AGTTAACCTGGAGATTGAAGCTGCTGAGAGAGAGTATGATTTGAACCGTGCAGCTGAGCT
CAAGTACGGAACACTTCTGTCGCTACAAAAACAGCTTGAAGAGGCTGAGAACAAACTCAT
GGAATTCCAGCAGTCAGGCAAGTCAATGCTTCGAGAAGAGGTGACTGATGTTGACATTGC
TGAGATTGTTAGCAAGTGGACTGGTATTCCAGTGTCAAACCTTCAACAATCTGAAAAGGA
AAAGCTACTGCTATTGGAAGATGTACTCCACAAGAGGGTTATTGGCCAAGATATTGCAGT
GAAGTCAGTGGCTAATGCAATCCGTCGTTCTAGGGCAGGCCTATCAGACCCTAACCGTCC
CATAGCAAGCTTAATGTTTATGGGTCCAACAGGTGTAGGAAAGACCGAACTGGGGAAAAC
ACTAGCTGAATTCCTTTTCAACACAGAGAATGCTCTAATACGGATTGATATGAGCGAGTA
CATGGAAAAGCATGCCGTCTCCCGTTTGGTTGGAGCCCCTCCTGGCTATATTGGTTATGG
GGAAGGGGGCCAACTGACAGAAGCTGTTCGTCGTAGGCCTTATTCTGTGGTTCTTTTCGA
TGAAATTGAGAAAGCGCACCAGGATGTGTTCAACATCTTATTGCAACTTTTGGATGATGG
AAGAATAACCGACTCTCAGGGCAGAACAGTCAGCTTTACTAACTGTGTTATCATCATGAC
TTCAAACATTGGGTCGCCATTGATTCTTGATACGCTTAGAAACACATCAGACAGCAAGGA
GGCAGTTTATGAAATAATGAAGAAGCAAGTGATTGACATGGCTCGGCAGTCATTCCGGCC
AGAGTTTTTGAATAGGATAGATGAGTACATTGTATTCCAGCCGCTGGACACCACAGAGAT
AAATCGCATCGTGGAGATCCAGCTGAACCGAGTCAAGAACCGGCTGAGGCAACAGAAGAT
TCATCTGCAGTACACACCAGAAGCTGTGGAGCATCTTGGCTCTCTCGGCTTTGACCCTAA
CTACGGTGCTAGGCCTGTGAAGAGGGTGATCCAGCAGATGGTAGAGAACGAGATCGCCCT
CAGTGTCCTGAAGGGCGACTTCAAAGAAGACGACACCGTCCTCGTCGACGTGAGCTCCGT
GGCGATCGCGAAAGGCCTTGCTCCACAGAAGAAGCTTGTCCTCCAGAGGTTAGAGAATGC
AAACTTAGAGTTAGTCGCCAATGACTAGTTAGTTACACGATGGCATCGCCAAATCCTGTA
CCAGGTTTGAGGTTCCCCCTCGTAGTAGATGTTTTCAGCAGCTGCAGGAGCTGCTAGTTC
GGCATGTTCCCACTTCTGAGCTTTCATATGGCTTTCTATAGAAAGTCTGTCCAGTTGAAA
AGAATGTAACTTGCAAAGGATGTTAGTTAAACTGTTCTGTAAATATTAGTTTCTCTTGGC