Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0180000-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:4450273:4454802:1 gene:Os02g0180000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:protein phosphatase 2C11, protein phosphatase 2C 11, protein phosphatase 19 description:Similar to Protein phosphatase type-2C. (Os02t0180000-01)
Sequence	ATGGGAATCTACCTCAGTACCCCCAAAACCGATAAGTTCTCTGAAGACGGGGAAAATGAT AAGCTTAAACTTGGTCTTTCGTCTATGCAAGGATGGCGTGCAAACATGGAAGATGCTCAT TCAGCATTGCTAAATCTTGACAATGAGACATCGTTCTTTGGTGTTTTTGATGGCCATGGA GGAAGAGTGGTTGCCAAATTCTGTGCAAAATATTTACACTCTCAAGTTCTCAGAAGTGAA GCCTATTCAGCTGGTGACTTAGGCACTGCTGTTCATAGAGCTTTCTTCAGGATGGACGAA ATGATGCGAGGACAGAGAGGCTGGAGAGAACTATCTGCACTTGGAGATAAGATAAACAAG ATTGGTGGTATGATTGAAGGGTTGATTTGGTCTCCGAGAGGCAGTGATTCGAATAATGGA CAAGATGATTGGTCTTTCGAAGAGGGACCCCACTCCGATTTTGCTGGGCCAACATGCGGA TGCACAGCATGTGTAGCGCTAATAAGAAATAACCAACTTGTTGTGGCGAACGCTGGTGAT TCCCGTTGTGTTATTTCTAGGGCTGGCCAGGCATACAATTTGTCAAGAGACCACAAGCCA GAGCTTGAAGCTGAGAGAGACAGAATAGTAAAAGCAGGGGGTTTCATTCATATGGGACGA ATAAATGGAAGTTTAAACTTGACAAGAGCAATTGGAGATATGGAATTTAAACAGAACAAA TTCTTGCCTCCTGAGAAGCAAATCGTGACTGCAAATCCTGACATCAACGTTGTTGAGCTT TGCGACGACGACGACTTTCTTGTTTTAGCATGTGACGGCATTTGGGACTGCATGTCAAGC CAACAGCTGGTGGATTTCATCCACGAGCATATACAGAAGGAGAGCAGTCTTTCTGCAGTG TGCGAAAGAGTGCTCGACAGATGCCTAGCTCCATCAACAATTGGTGGAGAGGGATGTGAC AACATGACCATGGTTCTGGTGCAGTTCAAAAAGCCTATTACTCAGAATAAAAAAGCCGAC GTAGGGGAGCAATCTGTGAAAGGTGTGGAAGAGGCTGAGATCAATGCTGCTGAGGAGAAT GGTTCTTGA

Peptide Sequence

PEP ID	Os02t0180000-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:4450273:4454802:1 gene:Os02g0180000 transcript:Os02t0180000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:protein phosphatase 2C11, protein phosphatase 2C 11, protein phosphatase 19 description:Similar to Protein phosphatase type-2C. (Os02t0180000-01)
Sequence	MGIYLSTPKTDKFSEDGENDKLKLGLSSMQGWRANMEDAHSALLNLDNETSFFGVFDGHG GRVVAKFCAKYLHSQVLRSEAYSAGDLGTAVHRAFFRMDEMMRGQRGWRELSALGDKINK IGGMIEGLIWSPRGSDSNNGQDDWSFEEGPHSDFAGPTCGCTACVALIRNNQLVVANAGD SRCVISRAGQAYNLSRDHKPELEAERDRIVKAGGFIHMGRINGSLNLTRAIGDMEFKQNK FLPPEKQIVTANPDINVVELCDDDDFLVLACDGIWDCMSSQQLVDFIHEHIQKESSLSAV CERVLDRCLAPSTIGGEGCDNMTMVLVQFKKPITQNKKADVGEQSVKGVEEAEINAAEEN GS

Transcript Sequence

Transcript ID	Os02t0180000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:4450273:4454802:1 gene:Os02g0180000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:protein phosphatase 2C11, protein phosphatase 2C 11, protein phosphatase 19 description:Similar to Protein phosphatase type-2C. (Os02t0180000-01)
Sequence	TTTCATCCATTTTTCCGCTCTCTCTCTCTCCGAATGCGCGTGATCTCGCACTCGCAGCCT CAGCATCAGCTGCATCACTCCCCGCCTCTCCGCGATCGCAAGGGCCGCGCCGATCCCCCC CGCACCAGAAGCCCTCGAGATTCCGATCTCCCAGAAAACCTCCGCCTCGCAGCGCGACGG ATCCATCCATCTCGCCACCTTTCTCCCACAAGGAATTTACTAGCTCTCGGAGAAACTACG GTTGAGGCTTGCGGTTTGGATGCACCTTCATGTTTATAAGAAGGCTCAGAGCTACCTGAT ATAACTCCTGTTCTGTCATAAACAGCTTATCAACATGGGAATCTACCTCAGTACCCCCAA AACCGATAAGTTCTCTGAAGACGGGGAAAATGATAAGCTTAAACTTGGTCTTTCGTCTAT GCAAGGATGGCGTGCAAACATGGAAGATGCTCATTCAGCATTGCTAAATCTTGACAATGA GACATCGTTCTTTGGTGTTTTTGATGGCCATGGAGGAAGAGTGGTTGCCAAATTCTGTGC AAAATATTTACACTCTCAAGTTCTCAGAAGTGAAGCCTATTCAGCTGGTGACTTAGGCAC TGCTGTTCATAGAGCTTTCTTCAGGATGGACGAAATGATGCGAGGACAGAGAGGCTGGAG AGAACTATCTGCACTTGGAGATAAGATAAACAAGATTGGTGGTATGATTGAAGGGTTGAT TTGGTCTCCGAGAGGCAGTGATTCGAATAATGGACAAGATGATTGGTCTTTCGAAGAGGG ACCCCACTCCGATTTTGCTGGGCCAACATGCGGATGCACAGCATGTGTAGCGCTAATAAG AAATAACCAACTTGTTGTGGCGAACGCTGGTGATTCCCGTTGTGTTATTTCTAGGGCTGG CCAGGCATACAATTTGTCAAGAGACCACAAGCCAGAGCTTGAAGCTGAGAGAGACAGAAT AGTAAAAGCAGGGGGTTTCATTCATATGGGACGAATAAATGGAAGTTTAAACTTGACAAG AGCAATTGGAGATATGGAATTTAAACAGAACAAATTCTTGCCTCCTGAGAAGCAAATCGT GACTGCAAATCCTGACATCAACGTTGTTGAGCTTTGCGACGACGACGACTTTCTTGTTTT AGCATGTGACGGCATTTGGGACTGCATGTCAAGCCAACAGCTGGTGGATTTCATCCACGA GCATATACAGAAGGAGAGCAGTCTTTCTGCAGTGTGCGAAAGAGTGCTCGACAGATGCCT AGCTCCATCAACAATTGGTGGAGAGGGATGTGACAACATGACCATGGTTCTGGTGCAGTT CAAAAAGCCTATTACTCAGAATAAAAAAGCCGACGTAGGGGAGCAATCTGTGAAAGGTGT GGAAGAGGCTGAGATCAATGCTGCTGAGGAGAATGGTTCTTGACGCCGATGATTATGCAG ACATTTGCTTTCATAAGCAGGCCGAGTGGAGCAGCAGTCACTGTGTGTGTGTGTGTGTGT GTGTGTATATATATATATATAGATATATATATATATATATATATATATATATATCAATTG TTTGTCAAATGATGTATCTGCACACATTCTGCTCAAGAACTCGGAGATAAATGGCACTGA ATGGAGCAACTGTGAAAACCTAATGCGCAGTTTTTGTGCGCCATCCACCATTCGTTGTCA TGCCAAAAAGTTGACCGTCCTGATTGTGGATATGATCACAATTGTCGACAATTAGAACTG ATCAAGTTGCTGTTTTCTGTTCTTTGCATACGCTGTAAACGTGGGCGAGTTTTTTGTTCT GCTGTTTTTTTTTGGGTGTGTGCGTGTGATAGATATGTCAATTGCAATTCATGCCCCATT TGGGTTATTGCTTCAGATCATGTCCAATCTGAATCCAGTTTATCATGTGATATCTGTTGG TTAGTTCAGTGCCGTGCTGCTGCGGTGCTGCCCTGGTGTGGTGAAAATGTATGCCTGTTA TGCATATGGAAGTATGGAACAATTTGGGGATTTTGCAAAAAGGAGGCAATGCAATTACAT TTCATATT