Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0178800-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:4355073:4362388:-1 gene:Os02g0178800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Glossy1-homologous gene 2 description:Glossy1(GL1) homolog, Cuticular wax biosynthesis, Drought resistance (Os02t0178800-01)
Sequence	ATGGCTGCTCCTCCTCTCTCGTCGTGGCCATGGGCAAGCCTCGGCTCGTACAAGTATGTG TTGTACGGGGCGGTGGTGTGGAAGGTGGCGGAGGAGTGGAGGCAGCAAGGGGCGGCGCCG GTGGGGTCGTGGTGGCTCCACCTGCTGCTGCTGTTCGCCGCCCGCGGGCTCACCTACCAG TTCTGGTTCTCCTACGGCAACATGCTCTTCTTCACCCGCCGCCGCCGCGTCGTCCCCGAC TCCGTCGACTTCCGCCAGGTCGACGCCGAATGGGACTGGGATAACTTTCTGCTGCTGCAG ACGCTGATAGGGGCAACGTTGGTGGGGAGCCCGGCGGTGGCGCGGCAGCAGCTGCTGCTC CCAAGCCTGAAGCAAGCGTGGGACCCACGCGGGTGGGCCATCGCACTGCTGCTGCATGTG TTGGTCGCTGAGCCGCTCTTTTACTGGGCCCACCGGGCCCTGCACCGGGCCCCACTCTTC AGCCGCTACCACGCCGCTCACCACCACGCCTCGGTCACCACACCCTTGACAGCTGGATTT GGGACGCCACTGGAGAGCCTGCTGCTGACGGTGGTGATAGGGGTCCCACTCGCAGGGGCC TTTCTGATGGGGGTAGGGTCCGTGGGCCTGGTCTATGGACACGTCCTTTTGTTTGACTTC TTGAGGTCCATGGGCTACAGTAACGTGGAGGTGATATCCCCTAGGGTCTTCCAGGCTGTT CCTCTTCTCAGATACCTCATCTACACCCCTACGTACCTGAGCCTGCACCACAGGGAGAAG GACTCAAACTTCTGCCTGTTCATGCCTATTTTTGATCTCCTGGGGGGCACCCTCAACCAC AAGTCATGGGAGCTGCAAAAGGAGGTCTACTTAGGCAAGAACGATCAGGCGCCGGACTTC GTGTTCCTGGCACACGTGGTGGACATCATGGCGTCGATGCACGTGCCGTTCGTGCTCCGG TCGTGCAGCTCGACGCCGTTCGCCAACCACTTCGTCCTCCTCCCGTTTTGGCCGGTCGCC TTCGGCTTCATGCTGCTCATGTGGTGCTGCTCCAAGACCTTCCTCGTCAGCTCCTACCGC CTCCGCGGCAACCTCCACCAGATGTGGACTGTCCCCCGATATGGGTTTCAGTACTTCATA CCGGCGGCGAAGAAAGGCATCAACGAGCAGATCGAGCTGGCCATCCTGCGTGCAGATCGG ATGGGCGTCAAGGTGCTCAGCCTCGCCGCTCTCAATAAGAACGAGGCACTGAATGGAGGT GGCACGCTGTTCGTGAACAAGCACCCGGAGCTGAGGGTGAGGGTGGTGCACGGCAACACC CTGACGGCGGCCGTGATCCTCAACGAGATCCCCAGCAACGTCAAGGACGTCTTCCTCACC GGCGCCACCTCCAAGCTCGGCAGAGCCATCGCCCTCTACCTCTGCAGAAAAAAGATCAGA GTCCTGATGTTGACATTGTCGTCGGAGAGGTTTCTGAAGATTCAGAGGGAAGCACCGGCA GAGTTCCAGCAGTACCTCGTGCAGGTCACCAAGTACCAGCCTGCACAAAACTGCAAGACG TGGCTGGTGGGGAAGTGGCTGTCGCCGAGGGAGCAGAGGTGGGCGCCGGCGGGGACACAC TTCCACCAGTTCGTGGTGCCGCCGATCATCGGGTTCCGGCGAGACTGCACCTACGGCAAG CTCGCCGCCATGAGGCTCCCCAAGGACGTCCAGGGCCTCGGCTACTGCGAGTACACGATG GAACGCGGGGTGGTGCACGCGTGCCACGCCGGCGGCGTGGTGCACTTCCTGGAAGGGTGG GAGCACCACGAGGTGGGCGCCATCGACGTCGACCGGATCGACGTCGTCTGGAAGGCGGCG CTCAAGCACGGCCTCACGCCGGCGTGA

Peptide Sequence

PEP ID	Os02t0178800-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:4355073:4362388:-1 gene:Os02g0178800 transcript:Os02t0178800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Glossy1-homologous gene 2 description:Glossy1(GL1) homolog, Cuticular wax biosynthesis, Drought resistance (Os02t0178800-01)
Sequence	MAAPPLSSWPWASLGSYKYVLYGAVVWKVAEEWRQQGAAPVGSWWLHLLLLFAARGLTYQ FWFSYGNMLFFTRRRRVVPDSVDFRQVDAEWDWDNFLLLQTLIGATLVGSPAVARQQLLL PSLKQAWDPRGWAIALLLHVLVAEPLFYWAHRALHRAPLFSRYHAAHHHASVTTPLTAGF GTPLESLLLTVVIGVPLAGAFLMGVGSVGLVYGHVLLFDFLRSMGYSNVEVISPRVFQAV PLLRYLIYTPTYLSLHHREKDSNFCLFMPIFDLLGGTLNHKSWELQKEVYLGKNDQAPDF VFLAHVVDIMASMHVPFVLRSCSSTPFANHFVLLPFWPVAFGFMLLMWCCSKTFLVSSYR LRGNLHQMWTVPRYGFQYFIPAAKKGINEQIELAILRADRMGVKVLSLAALNKNEALNGG GTLFVNKHPELRVRVVHGNTLTAAVILNEIPSNVKDVFLTGATSKLGRAIALYLCRKKIR VLMLTLSSERFLKIQREAPAEFQQYLVQVTKYQPAQNCKTWLVGKWLSPREQRWAPAGTH FHQFVVPPIIGFRRDCTYGKLAAMRLPKDVQGLGYCEYTMERGVVHACHAGGVVHFLEGW EHHEVGAIDVDRIDVVWKAALKHGLTPA

Transcript Sequence

Transcript ID	Os02t0178800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:4355073:4362388:-1 gene:Os02g0178800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Glossy1-homologous gene 2 description:Glossy1(GL1) homolog, Cuticular wax biosynthesis, Drought resistance (Os02t0178800-01)
Sequence	GGATCTCTTCTTATAAGTAGAGAGGGAGACGCAGCGTGTGGCATCCAAAGCTCTCTCTCT CTCTCTCTCATAGCTAGCTAGAGCATGCAGCTACTAGCTAGCAAGCTTAATTAGCAGCCA CACATTAGAGTCACAAAGTGAGAGAGAAGGAGGAGCTTCACAAGCTCGATCGAGAGAGCA AACTAAGCAAGCAGCCATGGCTGCTCCTCCTCTCTCGTCGTGGCCATGGGCAAGCCTCGG CTCGTACAAGTATGTGTTGTACGGGGCGGTGGTGTGGAAGGTGGCGGAGGAGTGGAGGCA GCAAGGGGCGGCGCCGGTGGGGTCGTGGTGGCTCCACCTGCTGCTGCTGTTCGCCGCCCG CGGGCTCACCTACCAGTTCTGGTTCTCCTACGGCAACATGCTCTTCTTCACCCGCCGCCG CCGCGTCGTCCCCGACTCCGTCGACTTCCGCCAGGTCGACGCCGAATGGGACTGGGATAA CTTTCTGCTGCTGCAGACGCTGATAGGGGCAACGTTGGTGGGGAGCCCGGCGGTGGCGCG GCAGCAGCTGCTGCTCCCAAGCCTGAAGCAAGCGTGGGACCCACGCGGGTGGGCCATCGC ACTGCTGCTGCATGTGTTGGTCGCTGAGCCGCTCTTTTACTGGGCCCACCGGGCCCTGCA CCGGGCCCCACTCTTCAGCCGCTACCACGCCGCTCACCACCACGCCTCGGTCACCACACC CTTGACAGCTGGATTTGGGACGCCACTGGAGAGCCTGCTGCTGACGGTGGTGATAGGGGT CCCACTCGCAGGGGCCTTTCTGATGGGGGTAGGGTCCGTGGGCCTGGTCTATGGACACGT CCTTTTGTTTGACTTCTTGAGGTCCATGGGCTACAGTAACGTGGAGGTGATATCCCCTAG GGTCTTCCAGGCTGTTCCTCTTCTCAGATACCTCATCTACACCCCTACGTACCTGAGCCT GCACCACAGGGAGAAGGACTCAAACTTCTGCCTGTTCATGCCTATTTTTGATCTCCTGGG GGGCACCCTCAACCACAAGTCATGGGAGCTGCAAAAGGAGGTCTACTTAGGCAAGAACGA TCAGGCGCCGGACTTCGTGTTCCTGGCACACGTGGTGGACATCATGGCGTCGATGCACGT GCCGTTCGTGCTCCGGTCGTGCAGCTCGACGCCGTTCGCCAACCACTTCGTCCTCCTCCC GTTTTGGCCGGTCGCCTTCGGCTTCATGCTGCTCATGTGGTGCTGCTCCAAGACCTTCCT CGTCAGCTCCTACCGCCTCCGCGGCAACCTCCACCAGATGTGGACTGTCCCCCGATATGG GTTTCAGTACTTCATACCGGCGGCGAAGAAAGGCATCAACGAGCAGATCGAGCTGGCCAT CCTGCGTGCAGATCGGATGGGCGTCAAGGTGCTCAGCCTCGCCGCTCTCAATAAGAACGA GGCACTGAATGGAGGTGGCACGCTGTTCGTGAACAAGCACCCGGAGCTGAGGGTGAGGGT GGTGCACGGCAACACCCTGACGGCGGCCGTGATCCTCAACGAGATCCCCAGCAACGTCAA GGACGTCTTCCTCACCGGCGCCACCTCCAAGCTCGGCAGAGCCATCGCCCTCTACCTCTG CAGAAAAAAGATCAGAGTCCTGATGTTGACATTGTCGTCGGAGAGGTTTCTGAAGATTCA GAGGGAAGCACCGGCAGAGTTCCAGCAGTACCTCGTGCAGGTCACCAAGTACCAGCCTGC ACAAAACTGCAAGACGTGGCTGGTGGGGAAGTGGCTGTCGCCGAGGGAGCAGAGGTGGGC GCCGGCGGGGACACACTTCCACCAGTTCGTGGTGCCGCCGATCATCGGGTTCCGGCGAGA CTGCACCTACGGCAAGCTCGCCGCCATGAGGCTCCCCAAGGACGTCCAGGGCCTCGGCTA CTGCGAGTACACGATGGAACGCGGGGTGGTGCACGCGTGCCACGCCGGCGGCGTGGTGCA CTTCCTGGAAGGGTGGGAGCACCACGAGGTGGGCGCCATCGACGTCGACCGGATCGACGT CGTCTGGAAGGCGGCGCTCAAGCACGGCCTCACGCCGGCGTGACCGCCGCCGCCGGAGGC CAGCGGCGAAGCCAACGAGAACGGCCGGCGATCTTGTGGGATTTGGTGTGCTGTAAGATA GAAGAAATGTACGAGAAAAAAACGATTTGCCGTGGGATTTAAATTAATTAAAATTTAATC