Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0178000-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:4306895:4309939:-1 gene:Os02g0178000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SNF1 related protein kinase-like protein. (Os02t0178000-01)
Sequence	ATGGGGTTTGTGGAGAGCATTGGGAGGTACAGGGTTGGCCGGACCATCGGCGCCGGCACG TTCGCCAAGGTCAGGCTCGCCGTCGACGCCGACACCGGCGCCACCGTCGCCGTCAAGGTC ATCGACAAGAGGATGGTGATCCGCAACAACCTCATGTACCAGGTCAAAAGAGAGATCACG GCCATGAAGCTCCTCAACCACCCCAACATTGTCAAGATATATGAGGTGATCGCGACGAAG ACGAAGATATGCCTGGTAATGGAGTATGTCTCAGGAGGGCAGCTATCTGACAAGCTAAGT TACCTCAAGAGGTTGGATGAGAAGGAAGCGAAGAAGTATTTCTACCAATTGATTGATGCT GTAGACTACTGCCATAGGAGAGGTGTCTACCACAGAGATCTCAAGCCTGAGAACTTGTTG GTAGATAATCAAGGCAATCTCAAGGTATCTGATTTTGGCCTCAGCGTGCTAAAAAAGCCA GGACAGTTTCTATCCACATCTTGTGGCTCACCATGCTATGTAGCTCCTGAGGTGATTCAG CACAAGAGTTATGATGGGGCAGCTGCAGACGTCTGGTCTTGTGGTGTGATCCTGTTTGAA CTTCTTGCTGGTTATCTACCATTTCAAGACTGCAGCTTAACAAACTTGTACAGAAGGATA TCTCGAGCTCAGTTTGTTTTTCCACAATGGCTCAGTGTCCCTCAGAAGAAGATTATAATC AGGATACTGGATCCATCTCCTATAACAAGAGCAAAGATAAGCGATATTTTTGATGATAAG TGGCTCCAAGATCACTGCAATCCATCAGCAAGGATTGAGAATGATGATGATTGTGATGTT ATTGAAGAGGCCAGCACAGACAGTGATAGCAGTCACAACACAGAGGTAAAGGAAACTGAA GAGATGACGGCAGAAACTGACCGATTCATTAATGCCTTCCAATTGATAGCGAGATGCAGT GATCTTGACTTGTCAGGTCTCTTCCAGGAGCAGAAAACAAAGCTCGCCTCGCCACACCCA GTACAGGAAACCTTCGACAAGATCAAGGTTGCAGCCAAGGATGTGAGCATGGCAGTGAAG AGAATGAACAGCTCTCTGGTGGAGATTCAGGACAGCAAATTACTACCAAGAAGCAATCTT GATCTTACTCTGTCGGCCGAGGTGATCAAGGTAACACCAGCTCACTGCGTCGTCGAGGTG TCCAAATCAACTGGGGATCTGAGATCATACAAAGAGTTCTGTAGAAGCCTATCAAGCTTG CTCAATGGTGGACAGCTGTCTGCAAGCTCATCTGATATGGAGTGTGATTAA

Peptide Sequence

PEP ID	Os02t0178000-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:4306895:4309939:-1 gene:Os02g0178000 transcript:Os02t0178000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SNF1 related protein kinase-like protein. (Os02t0178000-01)
Sequence	MGFVESIGRYRVGRTIGAGTFAKVRLAVDADTGATVAVKVIDKRMVIRNNLMYQVKREIT AMKLLNHPNIVKIYEVIATKTKICLVMEYVSGGQLSDKLSYLKRLDEKEAKKYFYQLIDA VDYCHRRGVYHRDLKPENLLVDNQGNLKVSDFGLSVLKKPGQFLSTSCGSPCYVAPEVIQ HKSYDGAAADVWSCGVILFELLAGYLPFQDCSLTNLYRRISRAQFVFPQWLSVPQKKIII RILDPSPITRAKISDIFDDKWLQDHCNPSARIENDDDCDVIEEASTDSDSSHNTEVKETE EMTAETDRFINAFQLIARCSDLDLSGLFQEQKTKLASPHPVQETFDKIKVAAKDVSMAVK RMNSSLVEIQDSKLLPRSNLDLTLSAEVIKVTPAHCVVEVSKSTGDLRSYKEFCRSLSSL LNGGQLSASSSDMECD

Transcript Sequence

Transcript ID	Os02t0178000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:4306895:4309939:-1 gene:Os02g0178000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SNF1 related protein kinase-like protein. (Os02t0178000-01)
Sequence	AAGTTGGGAGAGAGAGGGAGACGGCGAGATGGGGTTTGTGGAGAGCATTGGGAGGTACAG GGTTGGCCGGACCATCGGCGCCGGCACGTTCGCCAAGGTCAGGCTCGCCGTCGACGCCGA CACCGGCGCCACCGTCGCCGTCAAGGTCATCGACAAGAGGATGGTGATCCGCAACAACCT CATGTACCAGGTCAAAAGAGAGATCACGGCCATGAAGCTCCTCAACCACCCCAACATTGT CAAGATATATGAGGTGATCGCGACGAAGACGAAGATATGCCTGGTAATGGAGTATGTCTC AGGAGGGCAGCTATCTGACAAGCTAAGTTACCTCAAGAGGTTGGATGAGAAGGAAGCGAA GAAGTATTTCTACCAATTGATTGATGCTGTAGACTACTGCCATAGGAGAGGTGTCTACCA CAGAGATCTCAAGCCTGAGAACTTGTTGGTAGATAATCAAGGCAATCTCAAGGTATCTGA TTTTGGCCTCAGCGTGCTAAAAAAGCCAGGACAGTTTCTATCCACATCTTGTGGCTCACC ATGCTATGTAGCTCCTGAGGTGATTCAGCACAAGAGTTATGATGGGGCAGCTGCAGACGT CTGGTCTTGTGGTGTGATCCTGTTTGAACTTCTTGCTGGTTATCTACCATTTCAAGACTG CAGCTTAACAAACTTGTACAGAAGGATATCTCGAGCTCAGTTTGTTTTTCCACAATGGCT CAGTGTCCCTCAGAAGAAGATTATAATCAGGATACTGGATCCATCTCCTATAACAAGAGC AAAGATAAGCGATATTTTTGATGATAAGTGGCTCCAAGATCACTGCAATCCATCAGCAAG GATTGAGAATGATGATGATTGTGATGTTATTGAAGAGGCCAGCACAGACAGTGATAGCAG TCACAACACAGAGGTAAAGGAAACTGAAGAGATGACGGCAGAAACTGACCGATTCATTAA TGCCTTCCAATTGATAGCGAGATGCAGTGATCTTGACTTGTCAGGTCTCTTCCAGGAGCA GAAAACAAAGCTCGCCTCGCCACACCCAGTACAGGAAACCTTCGACAAGATCAAGGTTGC AGCCAAGGATGTGAGCATGGCAGTGAAGAGAATGAACAGCTCTCTGGTGGAGATTCAGGA CAGCAAATTACTACCAAGAAGCAATCTTGATCTTACTCTGTCGGCCGAGGTGATCAAGGT AACACCAGCTCACTGCGTCGTCGAGGTGTCCAAATCAACTGGGGATCTGAGATCATACAA AGAGTTCTGTAGAAGCCTATCAAGCTTGCTCAATGGTGGACAGCTGTCTGCAAGCTCATC TGATATGGAGTGTGATTAATCAAGTTATGTTCTATGAGTAGATGAATCAATGAATCTTCA ATTATCACAAACTCATGGAGTTCAGGAGCAAACAAGAGTGCCTACCGGGCAACTGGTGAG TGGTGACCTGAAAAAAAGGTGATGATAAACAGGACTAAAGTCATTCATCGCCCTTCTGCC GTAAATGCTGGTGCTGACGTGTTGTAACTTGTACCTTCAACTGTATGATAAACAAAACAT GTTGCATGCAAAGGGAACATGCAAGCCATTTCCATGTATTGGATTTTTTCCCCCCTGAAC TTATAATTTTCATTATTGTGCTTTTCTAACC