Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0177500-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:4270620:4274199:-1 gene:Os02g0177500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF). (Os02t0177500-01)
Sequence

ATGGCGACTGTGCCAGTTAACCCGAAGCCTTTCTTGAACAACCTGACAGGGAAGCCTGTC
ATTGTCAAACTTAAGTGGGGTATGGAATACAAAGGATATCTTGTTTCTGTCGACTCTTAT
ATGAATCTGCAGCTGGCTAATACAGAGGAGTATATTGATGGGCAATTCTCTGGAAACTTG
GGTGAGATACTGATAAGGTGCAACAACGTTTTGTATCTCCGAGGCGTTCCAGAGGATACC
GAGATAGAGGATGCGGAATGA

Peptide Sequence

PEP ID

Os02t0177500-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:4270620:4274199:-1 gene:Os02g0177500 transcript:Os02t0177500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF). (Os02t0177500-01)
Sequence

MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL
GEILIRCNNVLYLRGVPEDTEIEDAE

Transcript Sequence

Transcript ID

Os02t0177500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:4270620:4274199:-1 gene:Os02g0177500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF). (Os02t0177500-01)
Sequence

CCCTACGCATCCCCGACCAGCACCGGCACCGGCGGCGGCGGCGGCTACCCCCCTTCAATG
GCGACTGTGCCAGTTAACCCGAAGCCTTTCTTGAACAACCTGACAGGGAAGCCTGTCATT
GTCAAACTTAAGTGGGGTATGGAATACAAAGGATATCTTGTTTCTGTCGACTCTTATATG
AATCTGCAGCTGGCTAATACAGAGGAGTATATTGATGGGCAATTCTCTGGAAACTTGGGT
GAGATACTGATAAGGTGCAACAACGTTTTGTATCTCCGAGGCGTTCCAGAGGATACCGAG
ATAGAGGATGCGGAATGAGATAGCCCGGGCCATGTCCAGATTGATTATTGTAATATGCTG
CTGACATGAACAATTAAGTGTCATGTACAACTGATGCAGATTGACCTGGATCTTTAACTA
TGCCATGATATGGTAATGTTATGCGTTGAAACTGTCGTTGCTCGGAATGTGTGAGATCAT
ATTTCGTAAGAAAATACCATTTGCCTGTC