Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0177400-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:4264389:4268820:-1 gene:Os02g0177400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0177400-01)
Sequence

ATGGCAACCGCCGCCGCAGGCGATGATCCACCGTCACCGCCGCCGCCAGCGGAGCGGCCC
GGAGGGTGGTTCTCCGGCCTGGTATGCGGCGCCGGCCGCCTCCTCGCCGCCGTGCTCGGC
CCGGACTCCCCCGACTCCGGCACCGGCGGCTCCGCTTCCTCCTCGCAGGAGTCGTCGTCC
CAGTCTCCGCCGCCTCCGCGCGGCCACCGCGGCAGTGGCGATAATACTGCGCACTTTGCT
TCTAACAATCAGTTCAACCAGAGCGGAAAGGAGATTACTCTAAAAGACAGTGGTGTGGGA
TCCTTAGCACTTGTCTCAGAGATAGATCCCAAGGATGCTATACTGCAGATGCTTTTGCAA
GAAACGTACTCAAGATCGGAATGTGATATACTGATAAAGATAATTCACGAGCGGGTTGTG
GACTCAGACCCTGATGTGGTTGAACCTTCTATTGTTCTTCCAATTGCTTGGCAAACTAGC
CAACAGCAAGATCATGTTCCATACTCTTCATTTCGTCCAAACACTTGCTCTGCGAGTTCA
AATGTTCATGATTGTAGCCAACAGCTTGACAACAACATTGTTGAGAACGGATGGCTTGAA
GAGAGTCAGCATGCTCTGAAAAGAAGTAATTCTTGCACTGGACATAACCTCGATGAGTCT
CACTCCCGAAGTGTCAGACCAAAGCTAAATGATTTGAACATTTCAAATAGGCAGGATGGT
ATTCTTAAGAGTCATTCAGATATAGCTTCATTTGAAGAGGCAACCACCAAGTACCCTAAT
GCATTCAGGGGGATACCAGAAGATACAAAGAAGCTGTTCAAAGATATCCCCCTTCTCGGG
ACGGACAACCTAATATTTTCCAACATTGTTTCATATGATGACACTGATAATGACATATCA
GCTCTCCGTGGTAAGCGTCCTGCTGTAACTGCACGGACCTTTGCTTCAGCCACTAGTGAA
GCCAACCGGGATAACCGTTGTCCTACCATGCTCTATCCATACTCTGATCGGGACCTGACA
AATACCTTTCCTATTAAGGTGGAACCTTTGGATGATATTGTTCCTTTTGATCCTGAAATA
GTAGTCCTTTCACGCAAAAACCGTAACACAGGCACCATCTGCAATGACCCTTGTTCTGTT
TCAAAACTTATGTTTCAAGAGGACAAGGAGGCTGCGCCCAGTTCATCAACAGGCGTGCCG
CTTGAAAACAGTCCTAGGAATTGCACAGGAGCTAGCCTGCAAAGGAGCACTCAAACTAGG
AGAAGTTCACCTGCTAATGTATATCGTCGCCAATACATTGACAGCAGAACCCGATCAAGG
AGTGGTCCATCACATCAAGGCGAACCGATAGCGGTTGGCCAGGAGCCAGACTTGGCTCCA
ACCCAGGCGAAGAAACCGGTTGGGAGGCCAAGGAAGTCAAGAAGGTGA

Peptide Sequence

PEP ID

Os02t0177400-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:4264389:4268820:-1 gene:Os02g0177400 transcript:Os02t0177400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0177400-01)
Sequence

MATAAAGDDPPSPPPPAERPGGWFSGLVCGAGRLLAAVLGPDSPDSGTGGSASSSQESSS
QSPPPPRGHRGSGDNTAHFASNNQFNQSGKEITLKDSGVGSLALVSEIDPKDAILQMLLQ
ETYSRSECDILIKIIHERVVDSDPDVVEPSIVLPIAWQTSQQQDHVPYSSFRPNTCSASS
NVHDCSQQLDNNIVENGWLEESQHALKRSNSCTGHNLDESHSRSVRPKLNDLNISNRQDG
ILKSHSDIASFEEATTKYPNAFRGIPEDTKKLFKDIPLLGTDNLIFSNIVSYDDTDNDIS
ALRGKRPAVTARTFASATSEANRDNRCPTMLYPYSDRDLTNTFPIKVEPLDDIVPFDPEI
VVLSRKNRNTGTICNDPCSVSKLMFQEDKEAAPSSSTGVPLENSPRNCTGASLQRSTQTR
RSSPANVYRRQYIDSRTRSRSGPSHQGEPIAVGQEPDLAPTQAKKPVGRPRKSRR

Transcript Sequence

Transcript ID

Os02t0177400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:4264389:4268820:-1 gene:Os02g0177400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0177400-01)
Sequence

CTTCCCTCCAATTCTCCACTTCCCCATCCATGGCAACCGCCGCCGCAGGCGATGATCCAC
CGTCACCGCCGCCGCCAGCGGAGCGGCCCGGAGGGTGGTTCTCCGGCCTGGTATGCGGCG
CCGGCCGCCTCCTCGCCGCCGTGCTCGGCCCGGACTCCCCCGACTCCGGCACCGGCGGCT
CCGCTTCCTCCTCGCAGGAGTCGTCGTCCCAGTCTCCGCCGCCTCCGCGCGGCCACCGCG
GCAGTGGCGATAATACTGCGCACTTTGCTTCTAACAATCAGTTCAACCAGAGCGGAAAGG
AGATTACTCTAAAAGACAGTGGTGTGGGATCCTTAGCACTTGTCTCAGAGATAGATCCCA
AGGATGCTATACTGCAGATGCTTTTGCAAGAAACGTACTCAAGATCGGAATGTGATATAC
TGATAAAGATAATTCACGAGCGGGTTGTGGACTCAGACCCTGATGTGGTTGAACCTTCTA
TTGTTCTTCCAATTGCTTGGCAAACTAGCCAACAGCAAGATCATGTTCCATACTCTTCAT
TTCGTCCAAACACTTGCTCTGCGAGTTCAAATGTTCATGATTGTAGCCAACAGCTTGACA
ACAACATTGTTGAGAACGGATGGCTTGAAGAGAGTCAGCATGCTCTGAAAAGAAGTAATT
CTTGCACTGGACATAACCTCGATGAGTCTCACTCCCGAAGTGTCAGACCAAAGCTAAATG
ATTTGAACATTTCAAATAGGCAGGATGGTATTCTTAAGAGTCATTCAGATATAGCTTCAT
TTGAAGAGGCAACCACCAAGTACCCTAATGCATTCAGGGGGATACCAGAAGATACAAAGA
AGCTGTTCAAAGATATCCCCCTTCTCGGGACGGACAACCTAATATTTTCCAACATTGTTT
CATATGATGACACTGATAATGACATATCAGCTCTCCGTGGTAAGCGTCCTGCTGTAACTG
CACGGACCTTTGCTTCAGCCACTAGTGAAGCCAACCGGGATAACCGTTGTCCTACCATGC
TCTATCCATACTCTGATCGGGACCTGACAAATACCTTTCCTATTAAGGTGGAACCTTTGG
ATGATATTGTTCCTTTTGATCCTGAAATAGTAGTCCTTTCACGCAAAAACCGTAACACAG
GCACCATCTGCAATGACCCTTGTTCTGTTTCAAAACTTATGTTTCAAGAGGACAAGGAGG
CTGCGCCCAGTTCATCAACAGGCGTGCCGCTTGAAAACAGTCCTAGGAATTGCACAGGAG
CTAGCCTGCAAAGGAGCACTCAAACTAGGAGAAGTTCACCTGCTAATGTATATCGTCGCC
AATACATTGACAGCAGAACCCGATCAAGGAGTGGTCCATCACATCAAGGCGAACCGATAG
CGGTTGGCCAGGAGCCAGACTTGGCTCCAACCCAGGCGAAGAAACCGGTTGGGAGGCCAA
GGAAGTCAAGAAGGTGAGGTACTGGAAGGCCAGCAGAAGATGAAGAATGCGCAAGATCAG
AACTGTAAAAGGCTCACTCCAGGTTCGAGCTAACACCAGTAATTTCTAATTACCAGTATT
CAGGGAGAAACTGCTTAATGCCTTTGATCGTTGCTATCTTCAGTAGACTAACTAAGCAAT
GCTACTACTATTCTGAATTTACCTTCAGTTTCTTAGCACTTCGGAATTCTAAAACTTTTG
ATGAGTTCCTTTGATGTATATATATGGCAAGCCTAGCGCGGCACC