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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0176400-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:4184309:4185807:-1 gene:Os02g0176400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0414 domain containing protein. (Os02t0176400-01)
Sequence

ATGGCGTACGTGGACCACGCCTTCTCCATCTCCGACGAGGACGACCTCGTCGGCGGCGCC
GTGGGGGGCCCCCGCGGCGCGCCCGTCAAGGAGATCGCCTTCGCGGCCGCGCTCCTCGCG
TTCGGCGCGCTCGGCGCCATCGGTGGCGTCCTCATGGCCGCCAACAACGTCGGCGGCGAC
CGCGCGCACGGAATCTTCTTCATGATTCTGGGTATTGTGATGTTCATCCCTGGGTTCTAC
TACACAAGAATTGCCTACTATGCTTACAAAGGGTACAAGGGCTTCTCGTTTTCGAACATC
CCGCCGATCTAA

Peptide Sequence

PEP ID

Os02t0176400-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:4184309:4185807:-1 gene:Os02g0176400 transcript:Os02t0176400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0414 domain containing protein. (Os02t0176400-01)
Sequence

MAYVDHAFSISDEDDLVGGAVGGPRGAPVKEIAFAAALLAFGALGAIGGVLMAANNVGGD
RAHGIFFMILGIVMFIPGFYYTRIAYYAYKGYKGFSFSNIPPI

Transcript Sequence

Transcript ID

Os02t0176400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:4184309:4185807:-1 gene:Os02g0176400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0414 domain containing protein. (Os02t0176400-01)
Sequence

ACCTTGCTTGTACCCGCATCCACCTCCTCACCCTTTTTCTCTCTCATCAATCTCTCTCTC
TCCACATCCATCCAACCCTACCCACACCCACGCGACCAAACCCTCGGCGCGGCGGCGGCG
GCGGCGAGGAGGCGAGGAGGAGGCGTAGCAGCCGCCGCGTTGGCAAGCGCCAGGTGCGGG
CGGATCGGATCCGGGGGGCGGAGCGGAGGTGTGGTGGTGGGGGGGAGCTATGGCGTACGT
GGACCACGCCTTCTCCATCTCCGACGAGGACGACCTCGTCGGCGGCGCCGTGGGGGGCCC
CCGCGGCGCGCCCGTCAAGGAGATCGCCTTCGCGGCCGCGCTCCTCGCGTTCGGCGCGCT
CGGCGCCATCGGTGGCGTCCTCATGGCCGCCAACAACGTCGGCGGCGACCGCGCGCACGG
AATCTTCTTCATGATTCTGGGTATTGTGATGTTCATCCCTGGGTTCTACTACACAAGAAT
TGCCTACTATGCTTACAAAGGGTACAAGGGCTTCTCGTTTTCGAACATCCCGCCGATCTA
AAGAAAGAGGTGTATCATACGCCGACTTGGTTCATCTCATCACGTCCAATGGCGAACACC
ATTTCTCATTTTCATCTTGTCTATTTCTTCTTCTGCTGCCCCCCTTTGTAGGATGAACTT
CTAGACATGTACATATAAAATGCTACTCCCATAATGTATCATTATGGTGTGGTGAGCTGA
AAGGTTGTCCATTGTGTGATTATGTTGGGTTACTATGACACATGTCTGATAAGAACTTT