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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0175800-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:4141550:4143528:1 gene:Os02g0175800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to fiber protein Fb15. (Os02t0175800-01);Similar to fiber protein Fb15. (Os02t0175800-02)
Sequence

ATGGCGCTGCGAGCCCTGATCAGCGAGATCCGGGGGATGAAGGTGCGGGAGGTGCCGGGG
TACCTGAAGCCGCGGCTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTCGAC
CGCTACATCGACAAGTACATCGAGACCAGCTCGCCGGAGCCGCTCTTCCACGTCATCTAC
GGCCTCATGGCCTTCTCCTACCTCATCAACCTCCCCAAGGAGCGCCGCCACCTCGCCCAC
CTCGAGGAGCTCGAGAGGCAGGGCGCCGCCGGCGCCGCCCACCACTAG

Peptide Sequence

PEP ID

Os02t0175800-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:4141550:4143528:1 gene:Os02g0175800 transcript:Os02t0175800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to fiber protein Fb15. (Os02t0175800-01);Similar to fiber protein Fb15. (Os02t0175800-02)
Sequence

MALRALISEIRGMKVREVPGYLKPRLSWENVKKSSDQAVDRYIDKYIETSSPEPLFHVIY
GLMAFSYLINLPKERRHLAHLEELERQGAAGAAHH

Transcript Sequence

Transcript ID

Os02t0175800-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:4141550:4143528:1 gene:Os02g0175800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to fiber protein Fb15. (Os02t0175800-01);Similar to fiber protein Fb15. (Os02t0175800-02)
Sequence

GCGAGGAAGGGGAAGAGGAGAGATCGAGATCGGAGAGATCCATCCATGGCGCTGCGAGCC
CTGATCAGCGAGATCCGGGGGATGAAGGTGCGGGAGGTGCCGGGGTACCTGAAGCCGCGG
CTGAGCTGGGAGAACGTGAAGAAGAGCAGCGACCAGGCCGTCGACCGCTACATCGACAAG
TACATCGAGACCAGCTCGCCGGAGCCGCTCTTCCACGTCATCTACGGCCTCATGGCCTTC
TCCTACCTCATCAACCTCCCCAAGGAGCGCCGCCACCTCGCCCACCTCGAGGAGCTCGAG
AGGCAGGGCGCCGCCGGCGCCGCCCACCACTAGATCCGAGGTCAGGACTTGGGGTTTGTC
TGTGGTTGATTCGATCTAACAGAATTTCTGTTCTTCCACCGATGAGCTACCTGGAGTTGT
GATGATGTTCGTTTGATGGTTTATTTTGTACGGAAAGTCAGCAAAAAACTTTCCAGTTTA
TTGTTACATTCCTATGCATCTTATCATAAGCAACTTCAAACTGGAAGTGCATGCATTGTG
ATTAAAAACTTTTTCAGTTAATTTGAGCACAGCTGCTTCGATATATACTCT