Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0175400-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:4120173:4127533:1 gene:Os02g0175400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vacuolar H+-ATPase subunit A, Vacuolar proton-ATPase subunit A, vacuolar-type H+-ATPase subunit A2 description:Similar to Vacuolar H(+)-ATPase subunit A (Fragment). (Os02t0175400-01)
Sequence	ATGGCGTTCGGCGACCGCATCACCACCTTCGAGGACTCCGAGAAGGAGAGCGAGTACGGC TACGTCCGCAAGGTCTCTGGACCTGTGGTTGTGGCTGATGGAATGGGAGGTGCTGCCATG TATGAACTCGTCCGTGTTGGGCACGATAATCTTATTGGAGAAATTATTCGTCTTGAGGGG GATTCAGCTACAATTCAAGTTTATGAGGAAACTGCTGGACTGATGGTTAACGACCCTGTT TTGAGAACACGAAAGCCCCTGTCGGTTGAGTTGGGACCTGGTATTCTTGGGAACATTTTT GATGGGATCCAGCGCCCTCTGAAAACTATTGCTATTAAATCTGGAGATGTGTACATTCCG CGTGGTGTCTCAGTTCCTGCCCTTGACAAAGATGCTTTGTGGCATTTTAAGCCAGAAAAA CTAGGTGTTGGAGATATTATCACGGGTGGAGATCTATATGCTATTGTCAATGAAAATACT TTGATGCAACACAAGGTTGCTCTTCCACCTGGCGCTATGGGGAAAATAAGTTACATCGCC CCAGCTGGTCAATATAGCCTGCAGGATACAGTGCTAGAATTGGAATTTCAGGGTATCAAA AAGGAATTTACCATGCTCCAGACATGGCCTGTGCGTTCACCAAGGCCTGTTATGGAAAAA CTTGCTGCAGATACACCTCTTCTTACAGGACAGCGTGTACTTGATGCATTGTTCCCCTCA GTTCTTGGAGGAACATGTGCCATTCCTGGAGCTTTTGGTTGTGGAAAGACTGTCATTAGT CAGGCACTTTCCAAGTATTCCAACTCCCAAGCTGTGGTTTATGTCGGATGTGGCGAAAGA GGAAATGAGATGGCTGAGGTTCTCATGGACTTTCCCCAATTGACAATGACGACAGAGGAT GGACGTGAAGAGTCTGTGATGAAGAGAACAACACTGGTGGCTAACACATCCAACATGCCT GTCGCTGCTCGTGAAGCTTCCATTTATACAGGAATTACGATAGCTGAGTATTACCGTGAC ATGGGTTACAATGTCAGCATGATGGCTGATTCCACCTCACGATGGGCTGAGGCATTGCGT GAAATTTCTGGGCGTTTGGCTGAAATGCCTGCAGATAGTGGTTACCCTGCTTATTTGGCT GCAAGACTGGCATCTTTCTATGAACGTGCTGGTAAAGTAAGGTGTCTTGGAAGTCCAAAA CGGGACGGAAGTGTTACAATTGTAGGGGCTGTCTCTCCACCTGGTGGTGATTTTTCAGAT CCTGTTACCTCTGCAACCCTTAGTATTGTTCAGGTCTTCTGGGGATTAGATAAAAAGCTT GCCCAGAGGAAGCATTTCCCATCAGTGAATTGGCTCATATCTTATTCGAAATATTCTAAG GCGCTTGAGCCGCACTATGAGAGGGAAGATCCAGATTTCATTGATATTAGAACAAAGGCA CGTGAGGTGTTGCAGAGGGAAGATGATTTAAATGAAATAGTGCAGCTTGTTGGTAAAGAC GCACTGGCAGAATCTGACAAGATTACACTGGAGACAGCAAAACTTCTGAGAGAAGATTAT TTGGCACAAAATGCATTCACCCCATATGATAAGTATTGCCCATTCTACAAATCTGTTTGG ATGATGCGCAACATTATTCATTTCAACACATTGGCAACCCAGGCGGTGGAGCGGGCAGCT GGTGCTGATGGACAGAAGATTACATACAGTGTCATAAAGCATCGCATGGGCGATCTATTC TACCGCCTAGTGTCGCAAAAATTCGAGGATCCCGCAGAGGGCAAAGAAGTTTTGATTGCG AAATTTCAGAAGCTGTACGATGACCTTACCGCCGGGTTCCGCAATCTAGAAGACGAAGCA CGGTGA

Peptide Sequence

PEP ID	Os02t0175400-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:4120173:4127533:1 gene:Os02g0175400 transcript:Os02t0175400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vacuolar H+-ATPase subunit A, Vacuolar proton-ATPase subunit A, vacuolar-type H+-ATPase subunit A2 description:Similar to Vacuolar H(+)-ATPase subunit A (Fragment). (Os02t0175400-01)
Sequence	MAFGDRITTFEDSEKESEYGYVRKVSGPVVVADGMGGAAMYELVRVGHDNLIGEIIRLEG DSATIQVYEETAGLMVNDPVLRTRKPLSVELGPGILGNIFDGIQRPLKTIAIKSGDVYIP RGVSVPALDKDALWHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALPPGAMGKISYIA PAGQYSLQDTVLELEFQGIKKEFTMLQTWPVRSPRPVMEKLAADTPLLTGQRVLDALFPS VLGGTCAIPGAFGCGKTVISQALSKYSNSQAVVYVGCGERGNEMAEVLMDFPQLTMTTED GREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYYRDMGYNVSMMADSTSRWAEALR EISGRLAEMPADSGYPAYLAARLASFYERAGKVRCLGSPKRDGSVTIVGAVSPPGGDFSD PVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSKALEPHYEREDPDFIDIRTKA REVLQREDDLNEIVQLVGKDALAESDKITLETAKLLREDYLAQNAFTPYDKYCPFYKSVW MMRNIIHFNTLATQAVERAAGADGQKITYSVIKHRMGDLFYRLVSQKFEDPAEGKEVLIA KFQKLYDDLTAGFRNLEDEAR

Transcript Sequence

Transcript ID	Os02t0175400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:4120173:4127533:1 gene:Os02g0175400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vacuolar H+-ATPase subunit A, Vacuolar proton-ATPase subunit A, vacuolar-type H+-ATPase subunit A2 description:Similar to Vacuolar H(+)-ATPase subunit A (Fragment). (Os02t0175400-01)
Sequence	TTCCCTCCCCGACCAGATCGCGACACCGCCACCGCCGATCCGAAGGTCGGCGACGACGAC CACCACCGCCGCCGCCCTCGTCCTCGCCGCCGGCGGCCATGGCGTTCGGCGACCGCATCA CCACCTTCGAGGACTCCGAGAAGGAGAGCGAGTACGGCTACGTCCGCAAGGTCTCTGGAC CTGTGGTTGTGGCTGATGGAATGGGAGGTGCTGCCATGTATGAACTCGTCCGTGTTGGGC ACGATAATCTTATTGGAGAAATTATTCGTCTTGAGGGGGATTCAGCTACAATTCAAGTTT ATGAGGAAACTGCTGGACTGATGGTTAACGACCCTGTTTTGAGAACACGAAAGCCCCTGT CGGTTGAGTTGGGACCTGGTATTCTTGGGAACATTTTTGATGGGATCCAGCGCCCTCTGA AAACTATTGCTATTAAATCTGGAGATGTGTACATTCCGCGTGGTGTCTCAGTTCCTGCCC TTGACAAAGATGCTTTGTGGCATTTTAAGCCAGAAAAACTAGGTGTTGGAGATATTATCA CGGGTGGAGATCTATATGCTATTGTCAATGAAAATACTTTGATGCAACACAAGGTTGCTC TTCCACCTGGCGCTATGGGGAAAATAAGTTACATCGCCCCAGCTGGTCAATATAGCCTGC AGGATACAGTGCTAGAATTGGAATTTCAGGGTATCAAAAAGGAATTTACCATGCTCCAGA CATGGCCTGTGCGTTCACCAAGGCCTGTTATGGAAAAACTTGCTGCAGATACACCTCTTC TTACAGGACAGCGTGTACTTGATGCATTGTTCCCCTCAGTTCTTGGAGGAACATGTGCCA TTCCTGGAGCTTTTGGTTGTGGAAAGACTGTCATTAGTCAGGCACTTTCCAAGTATTCCA ACTCCCAAGCTGTGGTTTATGTCGGATGTGGCGAAAGAGGAAATGAGATGGCTGAGGTTC TCATGGACTTTCCCCAATTGACAATGACGACAGAGGATGGACGTGAAGAGTCTGTGATGA AGAGAACAACACTGGTGGCTAACACATCCAACATGCCTGTCGCTGCTCGTGAAGCTTCCA TTTATACAGGAATTACGATAGCTGAGTATTACCGTGACATGGGTTACAATGTCAGCATGA TGGCTGATTCCACCTCACGATGGGCTGAGGCATTGCGTGAAATTTCTGGGCGTTTGGCTG AAATGCCTGCAGATAGTGGTTACCCTGCTTATTTGGCTGCAAGACTGGCATCTTTCTATG AACGTGCTGGTAAAGTAAGGTGTCTTGGAAGTCCAAAACGGGACGGAAGTGTTACAATTG TAGGGGCTGTCTCTCCACCTGGTGGTGATTTTTCAGATCCTGTTACCTCTGCAACCCTTA GTATTGTTCAGGTCTTCTGGGGATTAGATAAAAAGCTTGCCCAGAGGAAGCATTTCCCAT CAGTGAATTGGCTCATATCTTATTCGAAATATTCTAAGGCGCTTGAGCCGCACTATGAGA GGGAAGATCCAGATTTCATTGATATTAGAACAAAGGCACGTGAGGTGTTGCAGAGGGAAG ATGATTTAAATGAAATAGTGCAGCTTGTTGGTAAAGACGCACTGGCAGAATCTGACAAGA TTACACTGGAGACAGCAAAACTTCTGAGAGAAGATTATTTGGCACAAAATGCATTCACCC CATATGATAAGTATTGCCCATTCTACAAATCTGTTTGGATGATGCGCAACATTATTCATT TCAACACATTGGCAACCCAGGCGGTGGAGCGGGCAGCTGGTGCTGATGGACAGAAGATTA CATACAGTGTCATAAAGCATCGCATGGGCGATCTATTCTACCGCCTAGTGTCGCAAAAAT TCGAGGATCCCGCAGAGGGCAAAGAAGTTTTGATTGCGAAATTTCAGAAGCTGTACGATG ACCTTACCGCCGGGTTCCGCAATCTAGAAGACGAAGCACGGTGAATAATTATTGTAGATT CTGTGTAAACAATAAGGATATATCACCAAATGTTCTATAAAAAAAACATGGAAGCATTCC ATTTGCTGCTACCGAGGCTCTAGGTCGAGATCATGTAGAAATTTTCCTGCAACTATACGC GCCGTCGTCGTTTTGTCAGGTTTTGATCCCAAGTGCTCGATGGACACGCCATTATTTCTA CTCTATGTATCATTTATTTATCATCTTCATTCACATCATTGTAATAAACATGGGCATGTT TATAGTCGAATAAATACGATGTCCATCTGTTTAAAAGTCTTCGTTGAAGGTCATTCATCT TTATTTGTTCGTTG