Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0175000-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:4103387:4105657:1 gene:Os02g0175000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY K+ TRANSPORTER 6 description:Ion transporter , Na+ transport (Os02t0175000-01)
Sequence	ATGAATCATTGTCTTGTAGTATCCCACAAAAAACTCCAAACTTTCCGCACATTTGCAGCT AGCAAGTTCTCTTCTTTTACCAAATCTGCACAGAAGTCTATAAAATACTCCTTCCAGTTC ATCTACCAAAACAATCCACTCTTTGTCCATGTAGCTTACTTTGCCCTGATCTCCTTTGCT GGATATGGATCTCTAAAGGTCCTCAAGCCACGAGACAAGTCAAATACTCTGAAAGACTTG GACGTGCTATTTACTTCCGTATCTGCATCAACTGTTTCAAGCATGGCTACTGTTGAAATG GAGGATTTCTCAAGCGCTCAACTCTGGGTTTTGACTATTTTAATGCTGATTGGTGGTGAG GTATTCACTTCAATGCTTGGCATTCACTTTATGAGAGCCGAATTTGGTACAAAAGAGTCA GTCAGCACAAGGGATCACTCACCTTGCATTGATATTGAGTCTATTACTTCCACAAAATTT GGTCCCAGCACCCAGGGCACAAAAGTTACAGTTTCATTTTCTGAACTCCGCATGGAAAAT GGAGGACATGTAGAGCCCAAGACGATTAAATTTTTAGGTTTTGTAGTGATGGGATATCTT CTAATAACAAACTTAGGCGGCTCCCTACTTATTTACCTCTACCTTAACCTGGTACCAAGT GCACATAAAATTCTAAAGAGAAAAGGCATTGGGATCATCGTATTCTCAGTATTTACAGCC ATCTCCTCAGTTGGAAATTGTGGCTTCACTCCAGTAAATGAGAATATGATTATCTTTCAG AAGAACTCCATTCTTCTATTGCTAATTCTTCCTCAGATACTAGCAGGAAATACATTATTT GCACCATGCTTGAGATTAATGGTGTGGTCACTTGAGAAGATTACCGGAAAAAAGGATTGT CGTTACATTCTTGAATATCCAAAGGCCATTGGATATAAACATCTTATGAGTACCAGGGAA AGTGTTTATTTGACTTTAACAGTTGTGAGCTTGATCATTCTGCAAACCGTATTGTTCCTC TCTTTGGAGTGGAGCTCGGTAGCTTTGGATGGAATGAGCAACTATCAAAAGATAGTATCC GCTCTATTTCAGTCGGTCAATGCTAGGCATGCAGGTGAATCTGTTACAGATCTGTCAAAC CTCTCTTCAGCAATCCTAGTCCTATACACCATCATGATGTATCTCCCTGGTTACACTTCG TTTTTACCCAGACATGATGGTGAGGATTCTAAGACCGAGAAGATAAACAAAAGAAAAGGG CTATTGGAGAACTGGATCTTCTCACATATGTCTTATTTGGCTATCTTTGTAATGCTAATT TGCATCACAGAACGGGACTCGATGGCTACAGATCCACTTAATTTCAATGTTTTCAGCATA TTGTTTGAAGTCGTCAGTGCATATGGAAATGTGGGGTTCTCGGTTGGCTACAGCTGCAAG AGGCTACTGAACCATGATGCACGCTGCAAGGATGCCTCGTACGGGTTTGCGGGGAAATGG AGCGACAATGGGAAAGCGATCCTGATCATCGTCATGCTTTTCGGGAGGCTTAAAACGTTT AACATGAAGGGTGGAAGAGCCTGGAAGCTTAGATAA

Peptide Sequence

PEP ID	Os02t0175000-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:4103387:4105657:1 gene:Os02g0175000 transcript:Os02t0175000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY K+ TRANSPORTER 6 description:Ion transporter , Na+ transport (Os02t0175000-01)
Sequence	MNHCLVVSHKKLQTFRTFAASKFSSFTKSAQKSIKYSFQFIYQNNPLFVHVAYFALISFA GYGSLKVLKPRDKSNTLKDLDVLFTSVSASTVSSMATVEMEDFSSAQLWVLTILMLIGGE VFTSMLGIHFMRAEFGTKESVSTRDHSPCIDIESITSTKFGPSTQGTKVTVSFSELRMEN GGHVEPKTIKFLGFVVMGYLLITNLGGSLLIYLYLNLVPSAHKILKRKGIGIIVFSVFTA ISSVGNCGFTPVNENMIIFQKNSILLLLILPQILAGNTLFAPCLRLMVWSLEKITGKKDC RYILEYPKAIGYKHLMSTRESVYLTLTVVSLIILQTVLFLSLEWSSVALDGMSNYQKIVS ALFQSVNARHAGESVTDLSNLSSAILVLYTIMMYLPGYTSFLPRHDGEDSKTEKINKRKG LLENWIFSHMSYLAIFVMLICITERDSMATDPLNFNVFSILFEVVSAYGNVGFSVGYSCK RLLNHDARCKDASYGFAGKWSDNGKAILIIVMLFGRLKTFNMKGGRAWKLR

Transcript Sequence

Transcript ID	Os02t0175000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:4103387:4105657:1 gene:Os02g0175000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY K+ TRANSPORTER 6 description:Ion transporter , Na+ transport (Os02t0175000-01)
Sequence	GCAAATAAGGAAGCACCCAATACATGCTGTTTAGCTCCACACAAATAGTTAGAAAATGAA TCATTGTCTTGTAGTATCCCACAAAAAACTCCAAACTTTCCGCACATTTGCAGCTAGCAA GTTCTCTTCTTTTACCAAATCTGCACAGAAGTCTATAAAATACTCCTTCCAGTTCATCTA CCAAAACAATCCACTCTTTGTCCATGTAGCTTACTTTGCCCTGATCTCCTTTGCTGGATA TGGATCTCTAAAGGTCCTCAAGCCACGAGACAAGTCAAATACTCTGAAAGACTTGGACGT GCTATTTACTTCCGTATCTGCATCAACTGTTTCAAGCATGGCTACTGTTGAAATGGAGGA TTTCTCAAGCGCTCAACTCTGGGTTTTGACTATTTTAATGCTGATTGGTGGTGAGGTATT CACTTCAATGCTTGGCATTCACTTTATGAGAGCCGAATTTGGTACAAAAGAGTCAGTCAG CACAAGGGATCACTCACCTTGCATTGATATTGAGTCTATTACTTCCACAAAATTTGGTCC CAGCACCCAGGGCACAAAAGTTACAGTTTCATTTTCTGAACTCCGCATGGAAAATGGAGG ACATGTAGAGCCCAAGACGATTAAATTTTTAGGTTTTGTAGTGATGGGATATCTTCTAAT AACAAACTTAGGCGGCTCCCTACTTATTTACCTCTACCTTAACCTGGTACCAAGTGCACA TAAAATTCTAAAGAGAAAAGGCATTGGGATCATCGTATTCTCAGTATTTACAGCCATCTC CTCAGTTGGAAATTGTGGCTTCACTCCAGTAAATGAGAATATGATTATCTTTCAGAAGAA CTCCATTCTTCTATTGCTAATTCTTCCTCAGATACTAGCAGGAAATACATTATTTGCACC ATGCTTGAGATTAATGGTGTGGTCACTTGAGAAGATTACCGGAAAAAAGGATTGTCGTTA CATTCTTGAATATCCAAAGGCCATTGGATATAAACATCTTATGAGTACCAGGGAAAGTGT TTATTTGACTTTAACAGTTGTGAGCTTGATCATTCTGCAAACCGTATTGTTCCTCTCTTT GGAGTGGAGCTCGGTAGCTTTGGATGGAATGAGCAACTATCAAAAGATAGTATCCGCTCT ATTTCAGTCGGTCAATGCTAGGCATGCAGGTGAATCTGTTACAGATCTGTCAAACCTCTC TTCAGCAATCCTAGTCCTATACACCATCATGATGTATCTCCCTGGTTACACTTCGTTTTT ACCCAGACATGATGGTGAGGATTCTAAGACCGAGAAGATAAACAAAAGAAAAGGGCTATT GGAGAACTGGATCTTCTCACATATGTCTTATTTGGCTATCTTTGTAATGCTAATTTGCAT CACAGAACGGGACTCGATGGCTACAGATCCACTTAATTTCAATGTTTTCAGCATATTGTT TGAAGTCGTCAGTGCATATGGAAATGTGGGGTTCTCGGTTGGCTACAGCTGCAAGAGGCT ACTGAACCATGATGCACGCTGCAAGGATGCCTCGTACGGGTTTGCGGGGAAATGGAGCGA CAATGGGAAAGCGATCCTGATCATCGTCATGCTTTTCGGGAGGCTTAAAACGTTTAACAT GAAGGGTGGAAGAGCCTGGAAGCTTAGATAACATCTAACCAATTTCAGAATAAAAGTAG