Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0173500-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:4024691:4028669:1 gene:Os02g0173500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cholinephosphate cytidylyltransferase. (Os02t0173500-01)
Sequence

ATGGCCGACCACGCTGCGGCGGAGGCGGCGCCGCAGTCGTCGCAGGAGGAGGAGGAGGAC
TGGAAGGAGGCCGAGGGGGGAGACGGGGACGTCGAGGTGGCGGACAGGGGCGGCGGAGGC
GGCGCCGCCAATGGGGGAATCCCGGAGGGGAGGCCGATCCGGGTCTACGCGGACGGAATC
TACGATCTCTTCCACTTCGGCCACGCCAAGTCGCTCGAGCAGGCCAAGAGGCTGTTTCCT
AACACATATCTCCTTGTCGGATGCTGCAATGATGAGTTGACACATAAGTACAAAGGGAGA
ACTGTTATGACAGAGGATGAGCGATATGAATCACTTCGTCACTGCAAGTGGGTGGATGAA
GTCATTCCTGATGCTCCATGGGTGGTAACGGAAGAATTCTTGAATAAACATAACATTGAT
TTTGTTGCACATGATTCTCTGCCGTATGCTGATGCTAGTGGAGCTGGTAACGATGTCTAT
GAATTTGTCAAAAAACTTGGTAAATTTAAGGAAACCCAGCGCACAGATGGGATATCGACG
TCAGATATTATAATGCGGATTGTTAAGGATTATAATGAGTATGTTATGCGGAACCTGGCC
AGGGGGTACACCAGAAAGGATCTTGGTGTCAGTTACGTTAAGGAAAAAAGACTGAGAGTT
AACATGGGATTAAAAAACCTGCGTGACAAAGTGAAGCAGCACCAAGAAAAAGTAGGGGAG
AAGTGGAATACAATGGCGAAACTCCAGGAAGAGTGGGTGGAAAATGCAGATCGATGGGTT
GCTGGTTTTCTGGAGAAGTTTGAAGAAGGCTGCCACTCAATGGGAACTGCCATCAAAGAG
CGGATCCAAGAGAGGCTCAAGGCGCAATCCAGGGATTTCAGCCTTCTACAGTATGATGGC
GAGGATGTTGACGAGGATGAGGACGACGACGAATATGTCAGAGAATAA

Peptide Sequence

PEP ID

Os02t0173500-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:4024691:4028669:1 gene:Os02g0173500 transcript:Os02t0173500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cholinephosphate cytidylyltransferase. (Os02t0173500-01)
Sequence

MADHAAAEAAPQSSQEEEEDWKEAEGGDGDVEVADRGGGGGAANGGIPEGRPIRVYADGI
YDLFHFGHAKSLEQAKRLFPNTYLLVGCCNDELTHKYKGRTVMTEDERYESLRHCKWVDE
VIPDAPWVVTEEFLNKHNIDFVAHDSLPYADASGAGNDVYEFVKKLGKFKETQRTDGIST
SDIIMRIVKDYNEYVMRNLARGYTRKDLGVSYVKEKRLRVNMGLKNLRDKVKQHQEKVGE
KWNTMAKLQEEWVENADRWVAGFLEKFEEGCHSMGTAIKERIQERLKAQSRDFSLLQYDG
EDVDEDEDDDEYVRE

Transcript Sequence

Transcript ID

Os02t0173500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:4024691:4028669:1 gene:Os02g0173500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Cholinephosphate cytidylyltransferase. (Os02t0173500-01)
Sequence

ATGTGAAATCTCGCCGTCTCCTCTCGGAGCCTTTCCTCCTCGCCTTCTCCCTTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCGAACCTTCTCGCCATGGCCGACCACGCT
GCGGCGGAGGCGGCGCCGCAGTCGTCGCAGGAGGAGGAGGAGGACTGGAAGGAGGCCGAG
GGGGGAGACGGGGACGTCGAGGTGGCGGACAGGGGCGGCGGAGGCGGCGCCGCCAATGGG
GGAATCCCGGAGGGGAGGCCGATCCGGGTCTACGCGGACGGAATCTACGATCTCTTCCAC
TTCGGCCACGCCAAGTCGCTCGAGCAGGCCAAGAGGCTGTTTCCTAACACATATCTCCTT
GTCGGATGCTGCAATGATGAGTTGACACATAAGTACAAAGGGAGAACTGTTATGACAGAG
GATGAGCGATATGAATCACTTCGTCACTGCAAGTGGGTGGATGAAGTCATTCCTGATGCT
CCATGGGTGGTAACGGAAGAATTCTTGAATAAACATAACATTGATTTTGTTGCACATGAT
TCTCTGCCGTATGCTGATGCTAGTGGAGCTGGTAACGATGTCTATGAATTTGTCAAAAAA
CTTGGTAAATTTAAGGAAACCCAGCGCACAGATGGGATATCGACGTCAGATATTATAATG
CGGATTGTTAAGGATTATAATGAGTATGTTATGCGGAACCTGGCCAGGGGGTACACCAGA
AAGGATCTTGGTGTCAGTTACGTTAAGGAAAAAAGACTGAGAGTTAACATGGGATTAAAA
AACCTGCGTGACAAAGTGAAGCAGCACCAAGAAAAAGTAGGGGAGAAGTGGAATACAATG
GCGAAACTCCAGGAAGAGTGGGTGGAAAATGCAGATCGATGGGTTGCTGGTTTTCTGGAG
AAGTTTGAAGAAGGCTGCCACTCAATGGGAACTGCCATCAAAGAGCGGATCCAAGAGAGG
CTCAAGGCGCAATCCAGGGATTTCAGCCTTCTACAGTATGATGGCGAGGATGTTGACGAG
GATGAGGACGACGACGAATATGTCAGAGAATAATGCCACCACTGTGAATATACGTCAAGT
ATAATATATGTACATGCGCTGCATGTAGCAGATCTTCAATCCTTGGGCATGTCATGCACC
CCTCTCTCTTCAGGAATGGTGAACTTGTGCCCCCCAGGTTAGATTTTGGTGCTGTGTTGT
AGCAATAGCAGGTGTTTTGTTTAGGCTAAGACGCAAAGTAAGCCTGTAAAATCCCCTAGT
CGATGGCCTGAATGGTTATCTGGAAGATACAGATATGTTCAATTATATTTTTGTTTAGCA
CACAAGAACACTATATTTCAATTGACTATCTACTATATTTCAATTGACT