Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0171100-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:3868115:3872945:1 gene:Os02g0171100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) (GAPDH). (Os02t0171100-01);Similar to glyceraldehyde-3-phosphate dehydrogenase, cytosolic. (Os02t0171100-02)
Sequence	ATGGCGCAGCAGCTCTCCGCCCCCTTCCGCGCCGCCGCGGCCGCCGGATCCCGCGCCTCC GCCGCCGCCGCCGATCCCGCCAAGGTGTTACGCTTGAGAAGCGCTGGCTCAGCTCAGTTC ACCTCCATCGCAGCTTCCTCTTCATTTGCTAGGAACATTGAGCCGCTGAGAGCGATAGCT ACTCAGGCACCCCCTGCCGTCCCACAATATTCGAGTGGCGAGAAGACAAAGGTTGGCATC AATGGGTTTGGGCGAATTGGGAGGTTGGTCCTGCGTATTGCAACCAGTAGAGATGATATT GAAGTTGTTGCTGTCAATGATCCTTTCATTGATGCTAAATACATGGCCTACATGTTCAAG TATGACTCCACTCATGGTCCATTTAAAGGCTCCATTAAGGTTGTGGATGATTCAACCCTG GAGATCAATGGAAAGAAAGTCACAATCACTAGCAAAAGAGATCCAGCAGATATTCCTTGG GGTAACTTTGGAGCTGAGTATGTTGTTGAATCTTCAGGTGTTTTTACAACAACTGAAAAG GCATCGGCACATTTGAAGGGCGGTGCTAAGAAAGTTGTGATATCTGCTCCATCAGCAGAT GCTCCAATGTTTGTCGTTGGAGTAAATGAGAAGAGCTATGATCCTAAAATGAATGTTGTT TCTAACGCAAGTTGTACTACCAACTGTCTTGCTCCTCTTGCCAAGGTTGTCCATGAGGAA TTTGGCATTGTTGAGGGTCTCATGACAACTGTTCATGCCACAACAGCCACCCAGAAGACT GTCGATGGCCCTTCAATGAAAGATTGGAGAGGAGGGCGTGGTGCTGCTCAAAACATAATT CCTAGCTCCACTGGTGCAGCCAAGGCTGTTGGGAAAGTCCTCCCTGAGCTAAATGGAAAG CTCACTGGTATGGCCTTCCGAGTTCCAACACCAAATGTGTCTGTTGTCGACTTGACCTGC CGGATTGAAAAAAGTGCATCCTATGACGATGTGAAAGCAGCCATCAAGGCAGCATCAGAG GGTGCACTGAAAGGTATTCTAGGTTACACAGATGAGGATGTGGTTTCCAATGACTTCGTT GGTGATGCAAGGTCAAGCATCTTTGATGCCAAGGCTGGTATTGGACTGAGCTCTTCCTTC ATGAAGCTTGTGTCATGGTATGACAACGAGTGGGGCTACAGCAACCGTGTGTTGGATCTG ATTGCCCACATGGCTCTTGTCAACGCCAAGCACTGA

Peptide Sequence

PEP ID	Os02t0171100-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:3868115:3872945:1 gene:Os02g0171100 transcript:Os02t0171100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) (GAPDH). (Os02t0171100-01);Similar to glyceraldehyde-3-phosphate dehydrogenase, cytosolic. (Os02t0171100-02)
Sequence	MAQQLSAPFRAAAAAGSRASAAAADPAKVLRLRSAGSAQFTSIAASSSFARNIEPLRAIA TQAPPAVPQYSSGEKTKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMFK YDSTHGPFKGSIKVVDDSTLEINGKKVTITSKRDPADIPWGNFGAEYVVESSGVFTTTEK ASAHLKGGAKKVVISAPSADAPMFVVGVNEKSYDPKMNVVSNASCTTNCLAPLAKVVHEE FGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGK LTGMAFRVPTPNVSVVDLTCRIEKSASYDDVKAAIKAASEGALKGILGYTDEDVVSNDFV GDARSSIFDAKAGIGLSSSFMKLVSWYDNEWGYSNRVLDLIAHMALVNAKH

Transcript Sequence

Transcript ID	Os02t0171100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:3868115:3872945:1 gene:Os02g0171100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) (GAPDH). (Os02t0171100-01);Similar to glyceraldehyde-3-phosphate dehydrogenase, cytosolic. (Os02t0171100-02)
Sequence	CGCCACCTTCCCCTTCCCCCCCTCCGCCGCCTCCTCCGCCGCGAAACGAAAGGCGAGCTC TCTCTCTCTCTCTCTCCGCGGCGCGGTCAAAACCCTAGCGCGCGAGGAGGCCCCCCCCAT GGCGCAGCAGCTCTCCGCCCCCTTCCGCGCCGCCGCGGCCGCCGGATCCCGCGCCTCCGC CGCCGCCGCCGATCCCGCCAAGGTGTTACGCTTGAGAAGCGCTGGCTCAGCTCAGTTCAC CTCCATCGCAGCTTCCTCTTCATTTGCTAGGAACATTGAGCCGCTGAGAGCGATAGCTAC TCAGGCACCCCCTGCCGTCCCACAATATTCGAGTGGCGAGAAGACAAAGGTTGGCATCAA TGGGTTTGGGCGAATTGGGAGGTTGGTCCTGCGTATTGCAACCAGTAGAGATGATATTGA AGTTGTTGCTGTCAATGATCCTTTCATTGATGCTAAATACATGGCCTACATGTTCAAGTA TGACTCCACTCATGGTCCATTTAAAGGCTCCATTAAGGTTGTGGATGATTCAACCCTGGA GATCAATGGAAAGAAAGTCACAATCACTAGCAAAAGAGATCCAGCAGATATTCCTTGGGG TAACTTTGGAGCTGAGTATGTTGTTGAATCTTCAGGTGTTTTTACAACAACTGAAAAGGC ATCGGCACATTTGAAGGGCGGTGCTAAGAAAGTTGTGATATCTGCTCCATCAGCAGATGC TCCAATGTTTGTCGTTGGAGTAAATGAGAAGAGCTATGATCCTAAAATGAATGTTGTTTC TAACGCAAGTTGTACTACCAACTGTCTTGCTCCTCTTGCCAAGGTTGTCCATGAGGAATT TGGCATTGTTGAGGGTCTCATGACAACTGTTCATGCCACAACAGCCACCCAGAAGACTGT CGATGGCCCTTCAATGAAAGATTGGAGAGGAGGGCGTGGTGCTGCTCAAAACATAATTCC TAGCTCCACTGGTGCAGCCAAGGCTGTTGGGAAAGTCCTCCCTGAGCTAAATGGAAAGCT CACTGGTATGGCCTTCCGAGTTCCAACACCAAATGTGTCTGTTGTCGACTTGACCTGCCG GATTGAAAAAAGTGCATCCTATGACGATGTGAAAGCAGCCATCAAGGCAGCATCAGAGGG TGCACTGAAAGGTATTCTAGGTTACACAGATGAGGATGTGGTTTCCAATGACTTCGTTGG TGATGCAAGGTCAAGCATCTTTGATGCCAAGGCTGGTATTGGACTGAGCTCTTCCTTCAT GAAGCTTGTGTCATGGTATGACAACGAGTGGGGCTACAGCAACCGTGTGTTGGATCTGAT TGCCCACATGGCTCTTGTCAACGCCAAGCACTGATTTGTTGAAAATCCTCCTCCGATAGT ATCTAGCTAGGAAAGGCTGCAATTTTGACGGTCTCTTTCTGTTGTCTTGGAATAAGATGT AAACTTGGAAACAAAGCAAAAAAAGAATGGACATTGATGTCCATGACATTGTTTGTAGCA GGCGGTGAAATTTACTCTGTATCGACCTGGGCAAGCGGAACTGTTGAGTGAACCATATGT CGGCAACCTGATTGATTCATTGAGTCCAATGCTATGCCATTCTATATTTACTTTAAACAT GCTTGTTTCATGCCAGAAATGTTCAACAGACAATTGGCAATTTACCTC