Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0168800-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:3715361:3718245:1 gene:Os02g0168800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Porphobilinogen deaminase description:Similar to Porphobilinogen deaminase (Fragment). (Os02t0168800-01);Similar to Porphobilinogen deaminase, chloroplastic. (Os02t0168800-02)
Sequence	ATGCCGCCGCCGCCGAGATGCGCCGCCACCACCGCCCACCACTCCCTCCTCGGCTCGCCC ACCTGCCTCGCGCGCCCGCGGCGGCGGTGCTGCCCCGTGCGCGCCGCCGTCGCCGTCCAG GCCGAGGCGCAGGCCAAGGTCTCGCTCATCCGGATTGGCACCCGCGGGAGTCCTCTTGCA CTGGCACAAGCTCATGAAACCCGAGACAAGCTGAAGGCTGCACACTCAGAGTTAGCCGAG GAGGGGGCCGTTGAGATTGTCATCATTAAGACCACAGGAGACATGATCTTGGACAAACCC CTGGCAGATATAGGTGGCAAGGGTTTATTCACCAAGGAGATCGATGATGCACTTTTGCAG GGAAGGATTGACATTGCCGTCCACTCGATGAAAGATGTTCCAACATATTTACCAGAAGGC ACGATATTGCCTTGTAATCTCCCACGGGAAGATGTGAGAGATGCATTCATATGCTTGACT GCAAGTTCCCTTGCGGAGCTTCCTGCTGGCAGTGTTGTTGGAAGTGCTTCTCTGCGTAGA CAATCTCAAATTCTCTACAAATATCCATCACTCAAAGTTGTTAACTTCAGAGGAAATGTT CAAACACGATTGAGGAAACTCAAAGAAGGAGATGTCCATGCTACATTGTTGGCTCTAGCT GGACTAAAACGCTTAAACATGGCAGAAACTGCGACATCTGTATTGTCAGTGGACGAAATG CTTCCAGCAGTTGCTCAAGGTGCTATTGGAATAGCTTGCAGAAGCAGTGATGACACAATG ATGAATTACTTGTCCTCATTGAACCATGAAGATACCAGATTAGCTGTTGCATGTGAAAGA GAATTCTTGTCAGTTCTTGATGGCAACTGCCGAACTCCAATTGCGGCATATGCTTCTCGT GACAAGGATGGGAATTGTTCATTCCGAGGGCTATTGGCTTCACCTGATGGATCTACAGTA TATGAGACTTCGAGAACTGGACCTTATGATTTCGATATCATGGTTGAGATGGGTAAAGAT GCTGGCCACGAGCTGAAAGCAAAGGCTGGCCCTGGCTTCTTTGATAGCTTGCAATGA

Peptide Sequence

PEP ID	Os02t0168800-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:3715361:3718245:1 gene:Os02g0168800 transcript:Os02t0168800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Porphobilinogen deaminase description:Similar to Porphobilinogen deaminase (Fragment). (Os02t0168800-01);Similar to Porphobilinogen deaminase, chloroplastic. (Os02t0168800-02)
Sequence	MPPPPRCAATTAHHSLLGSPTCLARPRRRCCPVRAAVAVQAEAQAKVSLIRIGTRGSPLA LAQAHETRDKLKAAHSELAEEGAVEIVIIKTTGDMILDKPLADIGGKGLFTKEIDDALLQ GRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTASSLAELPAGSVVGSASLRR QSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLALAGLKRLNMAETATSVLSVDEM LPAVAQGAIGIACRSSDDTMMNYLSSLNHEDTRLAVACEREFLSVLDGNCRTPIAAYASR DKDGNCSFRGLLASPDGSTVYETSRTGPYDFDIMVEMGKDAGHELKAKAGPGFFDSLQ

Transcript Sequence

Transcript ID	Os02t0168800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:3715361:3718245:1 gene:Os02g0168800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Porphobilinogen deaminase description:Similar to Porphobilinogen deaminase (Fragment). (Os02t0168800-01);Similar to Porphobilinogen deaminase, chloroplastic. (Os02t0168800-02)
Sequence	CCATCTTTGGTCTCCTCCCCCTCCCTCTCGCTCGCATCTTCCCCGGAGATGCCGCCGCCG CCGAGATGCGCCGCCACCACCGCCCACCACTCCCTCCTCGGCTCGCCCACCTGCCTCGCG CGCCCGCGGCGGCGGTGCTGCCCCGTGCGCGCCGCCGTCGCCGTCCAGGCCGAGGCGCAG GCCAAGGTCTCGCTCATCCGGATTGGCACCCGCGGGAGTCCTCTTGCACTGGCACAAGCT CATGAAACCCGAGACAAGCTGAAGGCTGCACACTCAGAGTTAGCCGAGGAGGGGGCCGTT GAGATTGTCATCATTAAGACCACAGGAGACATGATCTTGGACAAACCCCTGGCAGATATA GGTGGCAAGGGTTTATTCACCAAGGAGATCGATGATGCACTTTTGCAGGGAAGGATTGAC ATTGCCGTCCACTCGATGAAAGATGTTCCAACATATTTACCAGAAGGCACGATATTGCCT TGTAATCTCCCACGGGAAGATGTGAGAGATGCATTCATATGCTTGACTGCAAGTTCCCTT GCGGAGCTTCCTGCTGGCAGTGTTGTTGGAAGTGCTTCTCTGCGTAGACAATCTCAAATT CTCTACAAATATCCATCACTCAAAGTTGTTAACTTCAGAGGAAATGTTCAAACACGATTG AGGAAACTCAAAGAAGGAGATGTCCATGCTACATTGTTGGCTCTAGCTGGACTAAAACGC TTAAACATGGCAGAAACTGCGACATCTGTATTGTCAGTGGACGAAATGCTTCCAGCAGTT GCTCAAGGTGCTATTGGAATAGCTTGCAGAAGCAGTGATGACACAATGATGAATTACTTG TCCTCATTGAACCATGAAGATACCAGATTAGCTGTTGCATGTGAAAGAGAATTCTTGTCA GTTCTTGATGGCAACTGCCGAACTCCAATTGCGGCATATGCTTCTCGTGACAAGGATGGG AATTGTTCATTCCGAGGGCTATTGGCTTCACCTGATGGATCTACAGTATATGAGACTTCG AGAACTGGACCTTATGATTTCGATATCATGGTTGAGATGGGTAAAGATGCTGGCCACGAG CTGAAAGCAAAGGCTGGCCCTGGCTTCTTTGATAGCTTGCAATGAAAATAGAAATCCACC ATTGGCCAACTAGAGTGTTGAGTGGATTATTTTGATTTTTTTTTGTACCCTAGTTCTACT AGAGGATTGTACCACAATGTTGAGCTGTCTCATTCAGATCTGTATCTTTGCTTCTTTTAG CAAGGTGAGCTAGAATTTAGAACGTGGTTCCACGGTTATTGTAATCCCTTGTATTTCCAA TGAATTCTGGAAGAGGCTTTTGCGGCCAATTATGTTGTAACTTTGTAATTTGATGTAATT TTGCAGATGCTTTGTTTTCAAAATAATTTGATTCTG