Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0165500-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:3540933:3542667:1 gene:Os02g0165500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0165500-01)
Sequence

ATGGCATCCGCCGTCGCTAGCACCATGCCCTCGCCGCCGCCGCCCGCCGTCTCGTTCGGC
TGGCTCGCCCCCACGCGCGTGTCGCCGCCACCGGCATTGCCGGCGGTGGCGGTGGCGGCG
GAGCAGGCTGTGTCGAAGGAGTTCATTGATTTTGAGTTCAGCCTTGGTGGATCTGCGACC
ATGTTGCCGGCGGATGAGCTGTTCGCCGACGGGAAGTTGCTCCCGCTCCGGCCGCATCCG
GTGGCGGCGGAGAAGGCGGTGGCGATGGAGGCGGAGAAGGCGGTGCCGGAGCTCGTGAAG
GCGGTGCGGCCTGCGGTGGCGGTGGCAGCGGAGGTGTTCGACCCGTACGTGTTCTCACCC
AAGGCGCCGACGTGCTCGAGCAGGTGGAGGGAGCTGCTCCGGCTGAAGAAGGTCCAGACG
CCGACGAAGCCGTCGGCGTCGACGTCCGCATCGCCGTCGACGGCGACGGCGGCGACGCCG
TCGAGATCCTCGAACTCCTCGGCGGCCAGGTCGCTCAAGCTGCTGCTGCTCCAGCGGAAC
GGCGGGCGCGCGTCTGGCGCCGCCGCGTCGGACCTCTCCGTGGCGCCGCTCCTCCGCGAC
AGCTCCGACTCCGAGGCGTCCCTCTCCCTCGCGTCCTCCCGCTTCTCGCTCTCGTCGTCG
TCGTCGTCGTCCTGCCACGAGCACGACGACTTCCCCCGCCACTCCCTCGACTCCGTCGAC
CCCACACCACGGCCCCGCCTCCGCCTCGTCCGGTCTCAACCACAGCCGCACCCTCCTGCC
GCCGCCGCCGCCGCCGCCGCCGCCGTTGCCAAGCCTCGGGCGGCGATCCAGAGCCCCGCC
CGGCGCCGCCCCTCGCCACCGCCGCCGCCTCCGCCGCAGGTGGCCTCCGTGGACTCGCCG
CGCATGAACTCGTCCGGCAAGATCGTGTTCCAGGGCCTGGAACGCAGCTCGAGCTCGCCG
GCAGGGAGCGTCCACTCAAGCCTCCGGTCGCGGTCGCGCGTCATGGACAGGTCCTACTCC
GCTGGCGTCCGCGCCGCCACCCCCGTCGTGCTCAACGTGCCGGTCTGCTCGCGCCCGGTG
TTCGGGTTCTTCAAGGACAGGAAGGACGCGGCGGCGAAGGACTCGTCGGCGTCGCGGCCT
CGGTCGGCGCTTGGCCGGAAGACGGCGCCCCACGCCGGCAATGGCGGCGGCGCATCCAGA
GATCTTGGTACTAGCAACTGA

Peptide Sequence

PEP ID

Os02t0165500-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:3540933:3542667:1 gene:Os02g0165500 transcript:Os02t0165500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0165500-01)
Sequence

MASAVASTMPSPPPPAVSFGWLAPTRVSPPPALPAVAVAAEQAVSKEFIDFEFSLGGSAT
MLPADELFADGKLLPLRPHPVAAEKAVAMEAEKAVPELVKAVRPAVAVAAEVFDPYVFSP
KAPTCSSRWRELLRLKKVQTPTKPSASTSASPSTATAATPSRSSNSSAARSLKLLLLQRN
GGRASGAAASDLSVAPLLRDSSDSEASLSLASSRFSLSSSSSSSCHEHDDFPRHSLDSVD
PTPRPRLRLVRSQPQPHPPAAAAAAAAAVAKPRAAIQSPARRRPSPPPPPPPQVASVDSP
RMNSSGKIVFQGLERSSSSPAGSVHSSLRSRSRVMDRSYSAGVRAATPVVLNVPVCSRPV
FGFFKDRKDAAAKDSSASRPRSALGRKTAPHAGNGGGASRDLGTSN

Transcript Sequence

Transcript ID

Os02t0165500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:3540933:3542667:1 gene:Os02g0165500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0165500-01)
Sequence

GTGCTTTGCTCTCTTGCCTCTCCTGTCTCTTTCTCGGATTTTTCTCATCGAATCTCTCCA
CTTCACTAGCCAAAAGTACAGTACCACCAGTGTACTTCACCGTTTGATGCGCCTCGCCGC
CGGCAATGGCATCCGCCGTCGCTAGCACCATGCCCTCGCCGCCGCCGCCCGCCGTCTCGT
TCGGCTGGCTCGCCCCCACGCGCGTGTCGCCGCCACCGGCATTGCCGGCGGTGGCGGTGG
CGGCGGAGCAGGCTGTGTCGAAGGAGTTCATTGATTTTGAGTTCAGCCTTGGTGGATCTG
CGACCATGTTGCCGGCGGATGAGCTGTTCGCCGACGGGAAGTTGCTCCCGCTCCGGCCGC
ATCCGGTGGCGGCGGAGAAGGCGGTGGCGATGGAGGCGGAGAAGGCGGTGCCGGAGCTCG
TGAAGGCGGTGCGGCCTGCGGTGGCGGTGGCAGCGGAGGTGTTCGACCCGTACGTGTTCT
CACCCAAGGCGCCGACGTGCTCGAGCAGGTGGAGGGAGCTGCTCCGGCTGAAGAAGGTCC
AGACGCCGACGAAGCCGTCGGCGTCGACGTCCGCATCGCCGTCGACGGCGACGGCGGCGA
CGCCGTCGAGATCCTCGAACTCCTCGGCGGCCAGGTCGCTCAAGCTGCTGCTGCTCCAGC
GGAACGGCGGGCGCGCGTCTGGCGCCGCCGCGTCGGACCTCTCCGTGGCGCCGCTCCTCC
GCGACAGCTCCGACTCCGAGGCGTCCCTCTCCCTCGCGTCCTCCCGCTTCTCGCTCTCGT
CGTCGTCGTCGTCGTCCTGCCACGAGCACGACGACTTCCCCCGCCACTCCCTCGACTCCG
TCGACCCCACACCACGGCCCCGCCTCCGCCTCGTCCGGTCTCAACCACAGCCGCACCCTC
CTGCCGCCGCCGCCGCCGCCGCCGCCGCCGTTGCCAAGCCTCGGGCGGCGATCCAGAGCC
CCGCCCGGCGCCGCCCCTCGCCACCGCCGCCGCCTCCGCCGCAGGTGGCCTCCGTGGACT
CGCCGCGCATGAACTCGTCCGGCAAGATCGTGTTCCAGGGCCTGGAACGCAGCTCGAGCT
CGCCGGCAGGGAGCGTCCACTCAAGCCTCCGGTCGCGGTCGCGCGTCATGGACAGGTCCT
ACTCCGCTGGCGTCCGCGCCGCCACCCCCGTCGTGCTCAACGTGCCGGTCTGCTCGCGCC
CGGTGTTCGGGTTCTTCAAGGACAGGAAGGACGCGGCGGCGAAGGACTCGTCGGCGTCGC
GGCCTCGGTCGGCGCTTGGCCGGAAGACGGCGCCCCACGCCGGCAATGGCGGCGGCGCAT
CCAGAGATCTTGGTACTAGCAACTGACCTCCGTTTTGACTAAGCTAGAAGCATTAGCAAT
GTAACCTCAATTAGCCAGCCAAGTAGTCGTAGCATTTCCTTTCCAAAGAAAAGGAAACAA
CAAAAAAAGAACAGGGTGAGAGGAGAAATTTAGTTTGGGATTTGGAGTGAAGAGAAATTT
CAAATTTGGAGGAGAGGATAGATTGTTTTGTGAAGTCATTTTGCTTGATGTTTTGGGAGA
GGATCCTAGATATATCAGACCAAGCTAATTGGCCCATCCATTTTGCTCATTCTCATCTCA
TGTAAATCCAATCTAATCTTCTTTGCAACTACATTTTGCATTCTGTTTCTGCTTTGTACT
ACATTTGATCTGAGCTCGAACGAAGAGAAAAACATAAAACTATTGCACACGCTCT