Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0162600-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:3362047:3362944:1 gene:Os02g0162600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0162600-01)
Sequence

ATGGCGAAGGCGCAGGCGGCGGCGAGGATCATGACGGAGGTGGCGCCGCCGCAGCTGGTG
TCGGTGATGCGGCGGAGGAAGCAGGTGGCGAGGAGCCTCGACACGATCGCCGAGGACGAC
AGGGAGCTGATGCACCAGGTGCCCTACGCCGGCGACGGCCACCACCACGGCGTCAAGAAG
CAGGCTGCAGCGACCAGCTCGGCGAGCACCTTCGCCACGCCGACGTTGGCCTTCGAGCGG
CAGCCACCGCCGGCGCCGGCGCCGGCGCCGGCGAGCGGGTTCATGAGGGGGCTCAGCAAG
TGGTTCTCCAACAACGGCGTCCACGGCCAGGAGGGGTGGCCGGAGATCGGCCGCGAAGGT
CACCGGCGAGCCATCTATTCACAGCAGGCGCACATACGTGGGCGCGCCACGGGATTGAAT
TCAAGTTCATTAACTAGCTAG

Peptide Sequence

PEP ID

Os02t0162600-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:3362047:3362944:1 gene:Os02g0162600 transcript:Os02t0162600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0162600-01)
Sequence

MAKAQAAARIMTEVAPPQLVSVMRRRKQVARSLDTIAEDDRELMHQVPYAGDGHHHGVKK
QAAATSSASTFATPTLAFERQPPPAPAPAPASGFMRGLSKWFSNNGVHGQEGWPEIGREG
HRRAIYSQQAHIRGRATGLNSSSLTS

Transcript Sequence

Transcript ID

Os02t0162600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:3362047:3362944:1 gene:Os02g0162600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0162600-01)
Sequence

GTAAAACCGTGCACACTTAAGCCCACAAAAATCACAAGCTCTCGCAGTGTCACTAGCCAC
TAGTGTGAGGTTACAAACCAAAGTTTTTTTTTAGTTGTGTCATGGCGAAGGCGCAGGCGG
CGGCGAGGATCATGACGGAGGTGGCGCCGCCGCAGCTGGTGTCGGTGATGCGGCGGAGGA
AGCAGGTGGCGAGGAGCCTCGACACGATCGCCGAGGACGACAGGGAGCTGATGCACCAGG
TGCCCTACGCCGGCGACGGCCACCACCACGGCGTCAAGAAGCAGGCTGCAGCGACCAGCT
CGGCGAGCACCTTCGCCACGCCGACGTTGGCCTTCGAGCGGCAGCCACCGCCGGCGCCGG
CGCCGGCGCCGGCGAGCGGGTTCATGAGGGGGCTCAGCAAGTGGTTCTCCAACAACGGCG
TCCACGGCCAGGAGGGGTGGCCGGAGATCGGCCGCGAAGGTCACCGGCGAGCCATCTATT
CACAGCAGGCGCACATACGTGGGCGCGCCACGGGATTGAATTCAAGTTCATTAACTAGCT
AGTCGAGTTTAGTACGTTTATCAAGATGAGATGTACCCAAGTACCCATATGCTTAGTTAT
GATGAATTACGGCTTAAAACAATTTTGTCTCCTTGACAATAATAATATTTGCAAGACATA
GTTGTCCTCTGAAACAAGGTATGAACTGTTACGTACCAACAAGTCAGCATGGTAGAGATG
TGTACTGTCAATCTGTCACAGCCTAGTATGTCTCTGTAGTGGTCAAGGGAACATAACCAA
GGGAGATGCGTGCCTTTTATTTTACTATCACTTGGAACATGAGCTTCCATGTACAATGTT
CAGTTCTTAATTACACTGCACTAGCATCTAATACGCACCTATCGCGAAAGAATTTTGC