Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0160250-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:3263401:3265393:1 gene:Os02g0160250 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os02t0160250-00)
Sequence

ATGCCTCGAGCCTGTGGCAGGCAGAGCAGTGCAAAATTCCAATCGAAGAAACCAAAAGGA
GGCAGCAAAAAGACAGATCAAATGGATTCACCAACTGATCCATTCATCTGGCCAGGCCAG
CTGGGCTTTGCATATACATTGCAGACCACTAGAGCTATAAGAACCTTATCATTATCATTT
ACTAAACAGAAAAACTACTATCTGCATATCTTCAATTCCATGTCTCCAACTCCAAGAACC
AGTTTTGATCCCAACAGGAGTGCAGGAATGGAGGTAGCAGAATGCAGTGAGAAGCTGCAA
ATTTTAAAGGCATCGGCTTCAGCATCAATGGCTTATTCGATTGTTCAGTTCCCAGTCAAG
TGGCAATCCATCAAGTACAAGCTTCAGCAACTCTGTTCCAACCTGAATGCGCCAGGAGAC
GACGGCAGCTGCAACGAAAATGTGATTCTTGTTCAGTTTCTTCAGACGGCTACAGCAACA
GTAAGTCATATTCAAGCTATTGCTTCTCAATGCAGCGATGAATCTTACAATGGTGGAAGG
CTTCGTCTGAGGAGTGATTTGGACAGCATCAGCTCCAAGCTTGATATCCACCTGAAGGAC
CTCAAGGAGATGGTTTCCTCCAGAATTTCTGTGCGTTCTCAAGCTGTCATCGCAACGAGG
CCTGCCATTGGTGCAAGCCTAAGCAACAAGAGGTTCTACATCAATGATCTCTTCTTGAGG
GTGAGGATTGGGGATTTGGCTCAAAGAAAACAAGCCCTGGTCACCATTGGAGAGCTCCTA
TCTGAAGATATCGAGTATGTCAAGATTGTAGCTCTTGACATTGATAATAGCATCACTCTC
CTGATCAGCTTTCTTGAATCAGGGGATGCATGCATTCAAGAACAGGCTGCAAGAATTGTC
TCCCTTATTGCAGGCTATGATTCTTACAGAGGAATGCTTGTGAAAGCAGGTGTGGTTGCT
CCACTTGTCCAGTTACTGGATAGTCCAAGCTGCACCAGCACTACTGTTTCATCAAGGGAG
AGAGCAGCTCATGCATTGAGGGAGCTGACGAGCAACTCCGACAACGTCTGGGCCGTCTGC
GCACAAGGCGGTGTCACCGTGCTCCTGATCGTCTGCGCCAATGTCGATAGCAGGGGCAAG
CTGGTCAGCTCCGCTTTCGCGGTGCTGAAGAACCTGAGCAGGGTGGAGGAGGTGAAGATG
TTCATGGTGGAACAAGGTGCAGTTATGGAGTTGGTGAAGCTGTCCCGACAAAAGGAGGAA
GAACGCAAAGTTGGATCAGTTGAGCTGCTCCATTACATGGCCTTGGCTGATGCCAATGTC
AGACAAGCAGCAATCAGCATGGGGATGATCCAATCACTCACTCAGCTGATGAACCCTGAT
CTTCCATACTCATCCAAAGCCAGGGAGGTTGCTCTCTCAGCCATTGCATTCTTCTGCCTC
CCTTCCAAAGCTCTGACAGATGATCTCATCAGCTCCAATTTTCTTAGCTGGCTTCAAACC
TATCTCAACAATGTTGACTATGCTGTCCTGGAATGCACCCTCAACATTCTGGTACGGCTA
ACGAGGATCTCCGAGGAATACAGCAAGATGGTTGGCAGGGCAGGGTTCATGACTGCCCTG
GTAAGCTCACTTGGAGCCAAATCTTGTCAGGTCAGGGAGATGGCAGCACAAGTACTCTGC
AACCTACTGTTGCTTCACTCTAACCGTGTAGTTTTCATCCAAGATGGTGATAATCTGAAC
CGGCTGCTGCAGTCGCTTGAGCACGGTGACGGCAAGACGATGGCGAAGGATTTGGCCATT
TCTTGCCTCGTGTCGTTGGCAGAGACCAGTGCTGGAAGGAAGAAGATCATATCGTCTCAA
CATTTTGTCAGCTTGAAAGGACTCGCAGACTCCGGTGACCTTCCTGCCAAGAAGATCGTG
AAGAAACTCTGTGCTAACAAGTTGCAAAGCATTCTTACGAGAATCCGGATCACATGA

Peptide Sequence

PEP ID

Os02t0160250-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:3263401:3265393:1 gene:Os02g0160250 transcript:Os02t0160250-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os02t0160250-00)
Sequence

MPRACGRQSSAKFQSKKPKGGSKKTDQMDSPTDPFIWPGQLGFAYTLQTTRAIRTLSLSF
TKQKNYYLHIFNSMSPTPRTSFDPNRSAGMEVAECSEKLQILKASASASMAYSIVQFPVK
WQSIKYKLQQLCSNLNAPGDDGSCNENVILVQFLQTATATVSHIQAIASQCSDESYNGGR
LRLRSDLDSISSKLDIHLKDLKEMVSSRISVRSQAVIATRPAIGASLSNKRFYINDLFLR
VRIGDLAQRKQALVTIGELLSEDIEYVKIVALDIDNSITLLISFLESGDACIQEQAARIV
SLIAGYDSYRGMLVKAGVVAPLVQLLDSPSCTSTTVSSRERAAHALRELTSNSDNVWAVC
AQGGVTVLLIVCANVDSRGKLVSSAFAVLKNLSRVEEVKMFMVEQGAVMELVKLSRQKEE
ERKVGSVELLHYMALADANVRQAAISMGMIQSLTQLMNPDLPYSSKAREVALSAIAFFCL
PSKALTDDLISSNFLSWLQTYLNNVDYAVLECTLNILVRLTRISEEYSKMVGRAGFMTAL
VSSLGAKSCQVREMAAQVLCNLLLLHSNRVVFIQDGDNLNRLLQSLEHGDGKTMAKDLAI
SCLVSLAETSAGRKKIISSQHFVSLKGLADSGDLPAKKIVKKLCANKLQSILTRIRIT

Transcript Sequence

Transcript ID

Os02t0160250-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:3263401:3265393:1 gene:Os02g0160250 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os02t0160250-00)
Sequence

ATGCCTCGAGCCTGTGGCAGGCAGAGCAGTGCAAAATTCCAATCGAAGAAACCAAAAGGA
GGCAGCAAAAAGACAGATCAAATGGATTCACCAACTGATCCATTCATCTGGCCAGGCCAG
CTGGGCTTTGCATATACATTGCAGACCACTAGAGCTATAAGAACCTTATCATTATCATTT
ACTAAACAGAAAAACTACTATCTGCATATCTTCAATTCCATGTCTCCAACTCCAAGAACC
AGTTTTGATCCCAACAGGAGTGCAGGAATGGAGGTAGCAGAATGCAGTGAGAAGCTGCAA
ATTTTAAAGGCATCGGCTTCAGCATCAATGGCTTATTCGATTGTTCAGTTCCCAGTCAAG
TGGCAATCCATCAAGTACAAGCTTCAGCAACTCTGTTCCAACCTGAATGCGCCAGGAGAC
GACGGCAGCTGCAACGAAAATGTGATTCTTGTTCAGTTTCTTCAGACGGCTACAGCAACA
GTAAGTCATATTCAAGCTATTGCTTCTCAATGCAGCGATGAATCTTACAATGGTGGAAGG
CTTCGTCTGAGGAGTGATTTGGACAGCATCAGCTCCAAGCTTGATATCCACCTGAAGGAC
CTCAAGGAGATGGTTTCCTCCAGAATTTCTGTGCGTTCTCAAGCTGTCATCGCAACGAGG
CCTGCCATTGGTGCAAGCCTAAGCAACAAGAGGTTCTACATCAATGATCTCTTCTTGAGG
GTGAGGATTGGGGATTTGGCTCAAAGAAAACAAGCCCTGGTCACCATTGGAGAGCTCCTA
TCTGAAGATATCGAGTATGTCAAGATTGTAGCTCTTGACATTGATAATAGCATCACTCTC
CTGATCAGCTTTCTTGAATCAGGGGATGCATGCATTCAAGAACAGGCTGCAAGAATTGTC
TCCCTTATTGCAGGCTATGATTCTTACAGAGGAATGCTTGTGAAAGCAGGTGTGGTTGCT
CCACTTGTCCAGTTACTGGATAGTCCAAGCTGCACCAGCACTACTGTTTCATCAAGGGAG
AGAGCAGCTCATGCATTGAGGGAGCTGACGAGCAACTCCGACAACGTCTGGGCCGTCTGC
GCACAAGGCGGTGTCACCGTGCTCCTGATCGTCTGCGCCAATGTCGATAGCAGGGGCAAG
CTGGTCAGCTCCGCTTTCGCGGTGCTGAAGAACCTGAGCAGGGTGGAGGAGGTGAAGATG
TTCATGGTGGAACAAGGTGCAGTTATGGAGTTGGTGAAGCTGTCCCGACAAAAGGAGGAA
GAACGCAAAGTTGGATCAGTTGAGCTGCTCCATTACATGGCCTTGGCTGATGCCAATGTC
AGACAAGCAGCAATCAGCATGGGGATGATCCAATCACTCACTCAGCTGATGAACCCTGAT
CTTCCATACTCATCCAAAGCCAGGGAGGTTGCTCTCTCAGCCATTGCATTCTTCTGCCTC
CCTTCCAAAGCTCTGACAGATGATCTCATCAGCTCCAATTTTCTTAGCTGGCTTCAAACC
TATCTCAACAATGTTGACTATGCTGTCCTGGAATGCACCCTCAACATTCTGGTACGGCTA
ACGAGGATCTCCGAGGAATACAGCAAGATGGTTGGCAGGGCAGGGTTCATGACTGCCCTG
GTAAGCTCACTTGGAGCCAAATCTTGTCAGGTCAGGGAGATGGCAGCACAAGTACTCTGC
AACCTACTGTTGCTTCACTCTAACCGTGTAGTTTTCATCCAAGATGGTGATAATCTGAAC
CGGCTGCTGCAGTCGCTTGAGCACGGTGACGGCAAGACGATGGCGAAGGATTTGGCCATT
TCTTGCCTCGTGTCGTTGGCAGAGACCAGTGCTGGAAGGAAGAAGATCATATCGTCTCAA
CATTTTGTCAGCTTGAAAGGACTCGCAGACTCCGGTGACCTTCCTGCCAAGAAGATCGTG
AAGAAACTCTGTGCTAACAAGTTGCAAAGCATTCTTACGAGAATCCGGATCACATGACTT
CCTTCTCGCGTTT