Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0158900-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:3204086:3206332:1 gene:Os02g0158900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cystathionine b-synthase domain containing protein OsCBSX9, CBS domain containing protein OsCBSX9 description:Similar to SNF4. (Os02t0158900-01)
Sequence	ATGGCGCAGCAGCTGAGGACACCGGCGGCGGAGGAGGCGCTGCTGCGCGGCCACGCCGCC GGTGACAAGGACGACGCCGTCGCCGGCGAGAGCAAGGACGCGAAGCGCGCGCGGGCGGGG CTCTGCGGCGTGCTCCGGGAGCGGAAGGTGGTGGAGCTGGCGCGCGCCAAGCGGCGGCTG GTGGAGGTCCCCTACACGGCGACGCTCGCGCACACGGCGAACGCGCTCCTCGCCGCCCGC GTCTCCGCTGTCGCAGTCGCCGCGCCGCCGGGGCACTGGATCGGCGCCGGCGGGTCCATG ATCCTCGAGTCCGACCCGGCCACCGGCGCCGTCCGCAAGCACTACATCGGCATGGTCAAC ATGCTCGACATCCTCGCCCACATCGCCGAGGCCGGCGATGACAACGACGCCGCCGCCGAT GCTGCTCCCAGCGAGGCCGTCGACCTCGACCGCCGCATGGCCGTGCCGGTCTCCTCCGTC ATCGGCCACTCCCTCGAAGGCCTCACCCTGTGGACTCTCCATCCAAACACCAGTGTGCTG GATTGCATGGAGACGTTCAGCAAGGGGGTGCACCGCGCGCTGGTGCCGCTGGAGAGCGCG GCGGAGAATGTGGTGGCGGCGGAGCTCGTCGAGGCGGCGCCGGGGTACAGGATGGTGACG CAGATGGACGTGGCGCGCTTCCTGCGCGCGCGCGCCGCCGAGCTGGGGGACGCCATCCTG TCGCGCTCCGTGCGCGGCGTCGGCGTCGGCGGCGCCGTGCTCGCCGTGGCGAGCGGCACC AAGGTGATCGAGGCCGTCCGGGCGATGCGCGCCGCGTCGCTCGCCGCCGTCCCCGTCGTG GACGCCGCCCCCGCCGACGACGCCGACGCGCGGCGGATCCTCCTCCAGCTCCAGGACGGG AGGGGGAAGCGCGTCGTCGAGACGTTCTCGGCGACGGACCTCCGCGACTGCCCCGTGGCG GAGCTCCAGGCGTGGCTGGGCGTCGCCGTGGCGGAGTTCAAGAAGAAGGTGGCCATGTAC CGCGCCGGCGTTCTCGCCGCCGACGCCGACGAGGACGAAGAGCGGCGGCGGGAGATGGTG ACGTGCTCGCCGGAGAGCACGCTGGGGGAGGCGATCGAGAAGGCGGTGGCGCACCACGTG CACCGGCTGTGGGTGGTCGACGAGGAGGGGTTGCTCGCCGGGGTGGTGTCGCTGACCGAC GTGCTCCGCGTCGTCAGGGAGGCCGCCATCGGCGAGGACCGGGAGCTCCACGACATCCTA AGCTAG

Peptide Sequence

PEP ID	Os02t0158900-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:3204086:3206332:1 gene:Os02g0158900 transcript:Os02t0158900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cystathionine b-synthase domain containing protein OsCBSX9, CBS domain containing protein OsCBSX9 description:Similar to SNF4. (Os02t0158900-01)
Sequence	MAQQLRTPAAEEALLRGHAAGDKDDAVAGESKDAKRARAGLCGVLRERKVVELARAKRRL VEVPYTATLAHTANALLAARVSAVAVAAPPGHWIGAGGSMILESDPATGAVRKHYIGMVN MLDILAHIAEAGDDNDAAADAAPSEAVDLDRRMAVPVSSVIGHSLEGLTLWTLHPNTSVL DCMETFSKGVHRALVPLESAAENVVAAELVEAAPGYRMVTQMDVARFLRARAAELGDAIL SRSVRGVGVGGAVLAVASGTKVIEAVRAMRAASLAAVPVVDAAPADDADARRILLQLQDG RGKRVVETFSATDLRDCPVAELQAWLGVAVAEFKKKVAMYRAGVLAADADEDEERRREMV TCSPESTLGEAIEKAVAHHVHRLWVVDEEGLLAGVVSLTDVLRVVREAAIGEDRELHDIL S

Transcript Sequence

Transcript ID	Os02t0158900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:3204086:3206332:1 gene:Os02g0158900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cystathionine b-synthase domain containing protein OsCBSX9, CBS domain containing protein OsCBSX9 description:Similar to SNF4. (Os02t0158900-01)
Sequence	CGGACACAGATTCATCACCACTAGAATCTTCCACACAAAACTCAGTACAAGATCGGCAAT GGCGCAGCAGCTGAGGACACCGGCGGCGGAGGAGGCGCTGCTGCGCGGCCACGCCGCCGG TGACAAGGACGACGCCGTCGCCGGCGAGAGCAAGGACGCGAAGCGCGCGCGGGCGGGGCT CTGCGGCGTGCTCCGGGAGCGGAAGGTGGTGGAGCTGGCGCGCGCCAAGCGGCGGCTGGT GGAGGTCCCCTACACGGCGACGCTCGCGCACACGGCGAACGCGCTCCTCGCCGCCCGCGT CTCCGCTGTCGCAGTCGCCGCGCCGCCGGGGCACTGGATCGGCGCCGGCGGGTCCATGAT CCTCGAGTCCGACCCGGCCACCGGCGCCGTCCGCAAGCACTACATCGGCATGGTCAACAT GCTCGACATCCTCGCCCACATCGCCGAGGCCGGCGATGACAACGACGCCGCCGCCGATGC TGCTCCCAGCGAGGCCGTCGACCTCGACCGCCGCATGGCCGTGCCGGTCTCCTCCGTCAT CGGCCACTCCCTCGAAGGCCTCACCCTGTGGACTCTCCATCCAAACACCAGTGTGCTGGA TTGCATGGAGACGTTCAGCAAGGGGGTGCACCGCGCGCTGGTGCCGCTGGAGAGCGCGGC GGAGAATGTGGTGGCGGCGGAGCTCGTCGAGGCGGCGCCGGGGTACAGGATGGTGACGCA GATGGACGTGGCGCGCTTCCTGCGCGCGCGCGCCGCCGAGCTGGGGGACGCCATCCTGTC GCGCTCCGTGCGCGGCGTCGGCGTCGGCGGCGCCGTGCTCGCCGTGGCGAGCGGCACCAA GGTGATCGAGGCCGTCCGGGCGATGCGCGCCGCGTCGCTCGCCGCCGTCCCCGTCGTGGA CGCCGCCCCCGCCGACGACGCCGACGCGCGGCGGATCCTCCTCCAGCTCCAGGACGGGAG GGGGAAGCGCGTCGTCGAGACGTTCTCGGCGACGGACCTCCGCGACTGCCCCGTGGCGGA GCTCCAGGCGTGGCTGGGCGTCGCCGTGGCGGAGTTCAAGAAGAAGGTGGCCATGTACCG CGCCGGCGTTCTCGCCGCCGACGCCGACGAGGACGAAGAGCGGCGGCGGGAGATGGTGAC GTGCTCGCCGGAGAGCACGCTGGGGGAGGCGATCGAGAAGGCGGTGGCGCACCACGTGCA CCGGCTGTGGGTGGTCGACGAGGAGGGGTTGCTCGCCGGGGTGGTGTCGCTGACCGACGT GCTCCGCGTCGTCAGGGAGGCCGCCATCGGCGAGGACCGGGAGCTCCACGACATCCTAAG CTAGACAACTTTTTTTTTTTTTTGTCGTAAAGACAAGAAAAGTATGTATCTGCACTGCAA ACTGCCATGGTCGGCACAATGTGGTTGTTTTCGTGTTGTGAATTTTGCTTTGTTTCCATC AACATCAATGGATCGGTTTGGGCTGGTTTAGTTCTC