Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0158600-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:3191322:3194133:-1 gene:Os02g0158600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0158600-01)
Sequence

ATGGACCCGTACGACGTCGAGATGGAGGCCGCGGAGGGGGAGCCGATGGCCGAGCAGGCT
CCGCCGCCGGCTGCTGCGGCGGCGGCGGCGGCGAGAGGGGATGGGTGGAGCATGCTGTCC
CGCGCCCGAGTCCTGCTCGAGGAGGGCAAGCCGTCGCTCGCGCTGCAGGCGATTCTCTTG
GCCATAAGATCCCAAGGTGGTGAACAGGCTCTCATGCAGACGCTGAACCGTGCACGGGAA
CTCTACAGGCAAAGATCACAGCCCAGCCCTAGTGTTGATGATCTCGCTTCTTTGCTTGCA
CAATGTGCTATAGCAGAGTCGCAGTCAACAAACACTAATCCTCAACAAGTACCTGGCTCT
GACCCTGTCATGATGCTGGATTCTGATGAAGTCTGCATACTTGCTGAGAGTGGAAGGAAG
CAGATAATTTTAGATGCTTTTGCTGACGGCAGCAGCTTCATTTGCTTGAAATGTGGTGGG
CTGTTTAGCACCTCGCGCAAAGATGAGCACCTGGCCTACTGGTGCGGGACTGCATGA

Peptide Sequence

PEP ID

Os02t0158600-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:3191322:3194133:-1 gene:Os02g0158600 transcript:Os02t0158600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0158600-01)
Sequence

MDPYDVEMEAAEGEPMAEQAPPPAAAAAAAARGDGWSMLSRARVLLEEGKPSLALQAILL
AIRSQGGEQALMQTLNRARELYRQRSQPSPSVDDLASLLAQCAIAESQSTNTNPQQVPGS
DPVMMLDSDEVCILAESGRKQIILDAFADGSSFICLKCGGLFSTSRKDEHLAYWCGTA

Transcript Sequence

Transcript ID

Os02t0158600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:3191322:3194133:-1 gene:Os02g0158600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0158600-01)
Sequence

AGTTTCCGTTTCAGTTCGCCTCTTCTCCAATAAAGCAGCCGCCCCAGCACTCACGAACTC
CTGGAATCATCCGGAGCCGCATCCCGCCGCCGCCGCCGTGCACCCGCCTACCGGCGGCGA
CCCGTCGATCGGGAGTGAGTGAGGCAGAGAGGGCGCGAGATCGAGGCGTGGGAGATGGAC
CCGTACGACGTCGAGATGGAGGCCGCGGAGGGGGAGCCGATGGCCGAGCAGGCTCCGCCG
CCGGCTGCTGCGGCGGCGGCGGCGGCGAGAGGGGATGGGTGGAGCATGCTGTCCCGCGCC
CGAGTCCTGCTCGAGGAGGGCAAGCCGTCGCTCGCGCTGCAGGCGATTCTCTTGGCCATA
AGATCCCAAGGTGGTGAACAGGCTCTCATGCAGACGCTGAACCGTGCACGGGAACTCTAC
AGGCAAAGATCACAGCCCAGCCCTAGTGTTGATGATCTCGCTTCTTTGCTTGCACAATGT
GCTATAGCAGAGTCGCAGTCAACAAACACTAATCCTCAACAAGTACCTGGCTCTGACCCT
GTCATGATGCTGGATTCTGATGAAGTCTGCATACTTGCTGAGAGTGGAAGGAAGCAGATA
ATTTTAGATGCTTTTGCTGACGGCAGCAGCTTCATTTGCTTGAAATGTGGTGGGCTGTTT
AGCACCTCGCGCAAAGATGAGCACCTGGCCTACTGGTGCGGGACTGCATGATCCTGGCGA
TGCCCATAATTATACCTGTGGCCACCCCAGTCAATGATCATGGTACCCGTGAGATTTTGA
TCTTCTGTTACACCGAGGCAAGAGCATTGCCAATGTTGGACATTGTGTGGATAAAGCTTG
CCATATCCCTGTAATCTGTTCATCCTGTACTTTTTTGCTGGTGAAGTGGAAAAAAATCTC
TATATGTTTGCCT