Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0158100-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:3166617:3170816:-1 gene:Os02g0158100 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand domain containing protein. (Os02t0158100-01);Similar to EH-domain-containing protein 1. (Os02t0158100-02)
Sequence	ATGGAGCTCGCGCGATCGGCCTGCTCCAAGGAGCACCACAAGATCTACGCCGGCTGGTTC GCCGTCGCCGACCCAGATGGAGATGGGCGTGTCACGGGTGCTGATGCTACCAAGTTCTTC GCCATGTCCGGCCTGTCCCGCGCCGACCTCAAGCAGGTCTGGGCGATCGCGGACACCAAG CGGCAGGGGTTCCTCGGCTTCGGCGAGTTCGTCGCCGCGATGCAGCTCGTGTCACTGGCG CAAGCGGGGGAGGAGATCACTCAGGACAGTCTGAAGCGCGAAGACCTGAGTAGTTTGGAT CCACCTGTGATGGAAGGTCTTGACGAACTACTTGCGAGATCAAAGGCTGGGGTAAAGAGA GTACACCCAGAAGAAAATGGCGCCCCTCAGGTTCAAGTGCATTCTGCTAATAGCTGGTTC AGTTCAAAATCAGCAAAGAAGATGCAGGTCCCCCTGACTGCTGTTACTTCTGTAATTGAT GGCTTAAAAAGACTATACGTAGAAAAACTGAAGCCTCTGGAGGTTGCATACCGGTTCAAC GATTTTGCTTCCCCGTTATTGACAAGCAGTGATTTTGATGCAAAACCAATGGTTATGCTC TTGGGTCAATATTCTACAGGGAAAACAACTTTCATTAAGCATCTGCTGCAAACAAGTTAT CCAGGAGCTCATGTTGGACCAGAGCCCACTACTGACCGATTTGTTGTTGTCATGTCTGGA TCTGATGAAAGGACTATTCCTGGCAATACTATTGCTGTTCAAGCTGATATGCCATTCACT GGTCTTACGACATTTGGCGGTGCTTTTCTGTCAAAGTTCGAGTGCTCTCAGATGCCACAT CCGCTGCTCGATCATATCACCTTTGTGGACACCCCCGGTGTCCTGTCTGGTGAAAAGCAG CGGACGCAGCGTAGCTATGATTTCACCGGCATAACTTCATGGTTTGCTGCTAAGTGTGAC CTTATTCTTCTTCTGTTTGATCCTCATAAGCTTGATATCAGTGATGAGTTCAAACGTGTG ATTGCATCTTTACGTGGCCATGATGACAAAATACGTGTAGTGCTGAATAAGGCAGACCAA GTTGACACTCAGCAGCTTATGAGAGTGTATGGTGCACTGATGTGGTCTCTTGGGAAAGTA CTCAATACCCCTGAGGTCGCGCGTGTTTATATCGGGTCATTCAATGACAAACCAGTGAAT GAATCAGCTGTTGGACCAATTGGAAAGGACTTGTTTGAGAAAGAGCAAGATGATCTCCTC TGTGATCTGAAAGACATACCCAAGAAGGCCTGTGATCGTCGGGTCAACGAGTTTGTTAAA CGTGCTAGAGCTGCTAAGATTCATGCTTACATAATTGGCCATCTAAAGAAGGAGATGCCT GCAATGATGGGGAAAGCTAAGGCTCAACAGCGACTCATAGACAACCTGGGTGATGAGTTT GCAAAGGTCCAAAGGGAGTACCATCTTCCAGCCGGAGACTTCCCTGACGTTGAGCACTTC AAGGAGGTGTTGGGTGGGTACAACATCGACAAGTTCGAGAAGATGAAGCCCAAGCTGGTG CAGGCCGTGGACGACATGCTCGCGTACGACATCCCGGAGCTCCTCAAGAACTTCAGGAAC CCTTACGAGTGA

Peptide Sequence

PEP ID	Os02t0158100-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:3166617:3170816:-1 gene:Os02g0158100 transcript:Os02t0158100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand domain containing protein. (Os02t0158100-01);Similar to EH-domain-containing protein 1. (Os02t0158100-02)
Sequence	MELARSACSKEHHKIYAGWFAVADPDGDGRVTGADATKFFAMSGLSRADLKQVWAIADTK RQGFLGFGEFVAAMQLVSLAQAGEEITQDSLKREDLSSLDPPVMEGLDELLARSKAGVKR VHPEENGAPQVQVHSANSWFSSKSAKKMQVPLTAVTSVIDGLKRLYVEKLKPLEVAYRFN DFASPLLTSSDFDAKPMVMLLGQYSTGKTTFIKHLLQTSYPGAHVGPEPTTDRFVVVMSG SDERTIPGNTIAVQADMPFTGLTTFGGAFLSKFECSQMPHPLLDHITFVDTPGVLSGEKQ RTQRSYDFTGITSWFAAKCDLILLLFDPHKLDISDEFKRVIASLRGHDDKIRVVLNKADQ VDTQQLMRVYGALMWSLGKVLNTPEVARVYIGSFNDKPVNESAVGPIGKDLFEKEQDDLL CDLKDIPKKACDRRVNEFVKRARAAKIHAYIIGHLKKEMPAMMGKAKAQQRLIDNLGDEF AKVQREYHLPAGDFPDVEHFKEVLGGYNIDKFEKMKPKLVQAVDDMLAYDIPELLKNFRN PYE

Transcript Sequence

Transcript ID	Os02t0158100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:3166617:3170816:-1 gene:Os02g0158100 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand domain containing protein. (Os02t0158100-01);Similar to EH-domain-containing protein 1. (Os02t0158100-02)
Sequence	CCCGCATCACCCCCACCTCGTCAGGTTTCCGTTCCGCCTCCGCCTCTGCTGCTCCTCCTC CTCCTCGCCGCCGCCGCCGCCGCGACGAGGCATGGAGCTCGCGCGATCGGCCTGCTCCAA GGAGCACCACAAGATCTACGCCGGCTGGTTCGCCGTCGCCGACCCAGATGGAGATGGGCG TGTCACGGGTGCTGATGCTACCAAGTTCTTCGCCATGTCCGGCCTGTCCCGCGCCGACCT CAAGCAGGTCTGGGCGATCGCGGACACCAAGCGGCAGGGGTTCCTCGGCTTCGGCGAGTT CGTCGCCGCGATGCAGCTCGTGTCACTGGCGCAAGCGGGGGAGGAGATCACTCAGGACAG TCTGAAGCGCGAAGACCTGAGTAGTTTGGATCCACCTGTGATGGAAGGTCTTGACGAACT ACTTGCGAGATCAAAGGCTGGGGTAAAGAGAGTACACCCAGAAGAAAATGGCGCCCCTCA GGTTCAAGTGCATTCTGCTAATAGCTGGTTCAGTTCAAAATCAGCAAAGAAGATGCAGGT CCCCCTGACTGCTGTTACTTCTGTAATTGATGGCTTAAAAAGACTATACGTAGAAAAACT GAAGCCTCTGGAGGTTGCATACCGGTTCAACGATTTTGCTTCCCCGTTATTGACAAGCAG TGATTTTGATGCAAAACCAATGGTTATGCTCTTGGGTCAATATTCTACAGGGAAAACAAC TTTCATTAAGCATCTGCTGCAAACAAGTTATCCAGGAGCTCATGTTGGACCAGAGCCCAC TACTGACCGATTTGTTGTTGTCATGTCTGGATCTGATGAAAGGACTATTCCTGGCAATAC TATTGCTGTTCAAGCTGATATGCCATTCACTGGTCTTACGACATTTGGCGGTGCTTTTCT GTCAAAGTTCGAGTGCTCTCAGATGCCACATCCGCTGCTCGATCATATCACCTTTGTGGA CACCCCCGGTGTCCTGTCTGGTGAAAAGCAGCGGACGCAGCGTAGCTATGATTTCACCGG CATAACTTCATGGTTTGCTGCTAAGTGTGACCTTATTCTTCTTCTGTTTGATCCTCATAA GCTTGATATCAGTGATGAGTTCAAACGTGTGATTGCATCTTTACGTGGCCATGATGACAA AATACGTGTAGTGCTGAATAAGGCAGACCAAGTTGACACTCAGCAGCTTATGAGAGTGTA TGGTGCACTGATGTGGTCTCTTGGGAAAGTACTCAATACCCCTGAGGTCGCGCGTGTTTA TATCGGGTCATTCAATGACAAACCAGTGAATGAATCAGCTGTTGGACCAATTGGAAAGGA CTTGTTTGAGAAAGAGCAAGATGATCTCCTCTGTGATCTGAAAGACATACCCAAGAAGGC CTGTGATCGTCGGGTCAACGAGTTTGTTAAACGTGCTAGAGCTGCTAAGATTCATGCTTA CATAATTGGCCATCTAAAGAAGGAGATGCCTGCAATGATGGGGAAAGCTAAGGCTCAACA GCGACTCATAGACAACCTGGGTGATGAGTTTGCAAAGGTCCAAAGGGAGTACCATCTTCC AGCCGGAGACTTCCCTGACGTTGAGCACTTCAAGGAGGTGTTGGGTGGGTACAACATCGA CAAGTTCGAGAAGATGAAGCCCAAGCTGGTGCAGGCCGTGGACGACATGCTCGCGTACGA CATCCCGGAGCTCCTCAAGAACTTCAGGAACCCTTACGAGTGAGCCCGCTGACCTCTCGT CAGTTGTAAGATAAAGATGACCCCGCTCGGTCGTGAGTCGTGACACTGTATGTGAGTGAC ACCTGATGATGAAGGAATATGTTGTCAAGGCGAGACATGGACGGTTTTCTACTTTACCTG CCCATCTTTTGC