Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0156200-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:3084942:3087128:-1 gene:Os02g0156200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat domain containing protein. (Os02t0156200-00)
Sequence

ATGAGAGAGTTCATGCAGATGACACCACATTCTCCGTGGAGAAGCAGGCTAGCGATGCCG
TACTCTGGCCTCGCTACTGCTGCATTATTGCTGCTGCTTCTCATCGTGGCCACCTCCGCC
ATGGCTTGCGTCGAGCAGGAGAAGAGTTCTCTCCTCCAGTTCCTTGCTGAGCTGTCGCAT
GACGGTGGCATCGCCATGTCATGGCAGAATGGCACGAACTGCTGTGTGTGGGAGGGCATC
ACCTGCAATGAAGATGGGGCTGTCATTGAGGTTCGTCTCACCTCTAAAGGCCTTGAAGGG
CAAATCGCACCGTCGCTGGGAGAGCTCACCAGCTTGTCGCGCCTCAACCTGTCGTACAAC
TCCCTATCTGGCGGCCTTCCAGCAGAGCTGATGTCTTCTGGCAGCATTGTCGTCCTTGAT
GTCAGCTTCAATCGCCTCAACGGGGACCTGCAAGAGTTGAATCCATCAGTATCTGACAGG
CCACTGCAGGTACTGAATATCTCAAGCAACCGGTTTACAGGAGAATTTCCATCCATCACA
TGGGAGAAAATGAGGAACCTGGTCGCAATCAACGCGAGCAACAACAGTTTTACCGGGCAC
ATACCTTCCTCCTTCTGCAGCAATTCGCCATCTTTTGCTGTTCTTGATCTTGGGTACAAC
CAGTTCAGTGGCAACATCCCCCCTGGAATAGGTAAATGTTCTGCCCTTAGACTTCTCAAG
GCTAATGCCAACAACATCAGAGGGCCTCTCCCAGGTGATCTCTTCAATGCCACATCATTG
GAGTACCTCTCTTTCGCTAACAATGGATTGCAAGGAACAATTGATGATGCTCTCATCGTA
AAGCTCATCAATCTTGTTTTTGTTGATCTTGGATGGAATAGATTCAGTGGCAAGATCCCA
AATTCTATAGGCCAGTTGAAAAGACTAAAGGAGCTTCACATTTGCAGCAACAACTTATCT
GGAGAGCTGCCATCATCATTGGGAGATTGCACAAAACTAGTAACCATCAACCTCAGGGGA
AACAAGTTGACGGGTGAGCTTGCCAAGGTTAACTACTCCAATCTACCCAATCTGAAAACA
TTAGATTTTGCCTCGAATCACTTCACCGGCAAAATTCCAGAAAGCATATACTCATGTAGT
AATTTGACTTGGTTGCGGCTATCTTCCAATAGGCTTCACGGCCAGTTGACAAAGAACATA
CAGAATCTGAATTCTATCACCTTCTTATCTCTTTCCTACAACAATTTTACAAATATCAAA
AATACTCTTCACATACTCAAGAGCTTAAGGAACCTCAATGTCTTGTTAATTGGGGGCAAC
TTCATGCACGAAGCTATGCCACAGGATGAAACAATTGATGGTTTCGAGAATATTTTTGGT
ATTAGCATACATGATTGTGCATTGACTGGAAAAATACCTAGTTGGCTCTCAAAGCTCGGA
AATTTGGCAGTTTTAGATTTATCCAACAATAAACTCAGGGGACCTATACCAACCTGGATC
AATAGCCTAAACTTCCTTAAGTATGCAGACATATCCAATAATAGCCTTTCAGGAGAAATA
CCACAAGCACTAATGGAGATACCAATGCTAAAATCAGATAAGATTGCAGATAACTCAGAC
CCAAGAGCCTTTCCGTTTCCAGTGTATGCAGGCGCATGTCTGTGTTTTCAGTACCGTACA
GTTACTGCTTTCCCTAAAATGTTGAATCTAGGTAATAACAAATTCACTGGTGCGATCCCG
ATGGAGATTGGTGAGTTGAAAGCACTCGTTTCACTCAACTTGAGCTTCAACAACCTAAAC
AGGGAGATCCCACAATCGATCAGCAACCTCAAGAATCTGATGGTTCTAGACCTGTCATAC
AACCATCTGACAGGTGCAATCCCTCCAGCACTGGTGAACCTTCACTTCCTTTCTGAATTC
AATGTTTCCCACAATGATCTAAAAGGGTCTGTACCAATTGGAGGCCAGTTCAGCACATTT
CCAAGTTCTAGTTTTGCTGGAAACCCAGAGCTATGCAGCCCGATACTTTTGCACCGTTGC
AATGTAGCAGAAGTAGATTTGTCTTCCCCAAACTCAACAAAAGAGTACATCAACAAGGTC
ATCTTTGTGATTGCTTTTTGTGTATTCTTTGGAGTAGGAGTGCTATATGATCAGATAGTT
CTATCCAGATATTTTCGGTTGAACTGA

Peptide Sequence

PEP ID

Os02t0156200-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:3084942:3087128:-1 gene:Os02g0156200 transcript:Os02t0156200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat domain containing protein. (Os02t0156200-00)
Sequence

MREFMQMTPHSPWRSRLAMPYSGLATAALLLLLLIVATSAMACVEQEKSSLLQFLAELSH
DGGIAMSWQNGTNCCVWEGITCNEDGAVIEVRLTSKGLEGQIAPSLGELTSLSRLNLSYN
SLSGGLPAELMSSGSIVVLDVSFNRLNGDLQELNPSVSDRPLQVLNISSNRFTGEFPSIT
WEKMRNLVAINASNNSFTGHIPSSFCSNSPSFAVLDLGYNQFSGNIPPGIGKCSALRLLK
ANANNIRGPLPGDLFNATSLEYLSFANNGLQGTIDDALIVKLINLVFVDLGWNRFSGKIP
NSIGQLKRLKELHICSNNLSGELPSSLGDCTKLVTINLRGNKLTGELAKVNYSNLPNLKT
LDFASNHFTGKIPESIYSCSNLTWLRLSSNRLHGQLTKNIQNLNSITFLSLSYNNFTNIK
NTLHILKSLRNLNVLLIGGNFMHEAMPQDETIDGFENIFGISIHDCALTGKIPSWLSKLG
NLAVLDLSNNKLRGPIPTWINSLNFLKYADISNNSLSGEIPQALMEIPMLKSDKIADNSD
PRAFPFPVYAGACLCFQYRTVTAFPKMLNLGNNKFTGAIPMEIGELKALVSLNLSFNNLN
REIPQSISNLKNLMVLDLSYNHLTGAIPPALVNLHFLSEFNVSHNDLKGSVPIGGQFSTF
PSSSFAGNPELCSPILLHRCNVAEVDLSSPNSTKEYINKVIFVIAFCVFFGVGVLYDQIV
LSRYFRLN

Transcript Sequence

Transcript ID

Os02t0156200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:3084942:3087128:-1 gene:Os02g0156200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat domain containing protein. (Os02t0156200-00)
Sequence

ATGAGAGAGTTCATGCAGATGACACCACATTCTCCGTGGAGAAGCAGGCTAGCGATGCCG
TACTCTGGCCTCGCTACTGCTGCATTATTGCTGCTGCTTCTCATCGTGGCCACCTCCGCC
ATGGCTTGCGTCGAGCAGGAGAAGAGTTCTCTCCTCCAGTTCCTTGCTGAGCTGTCGCAT
GACGGTGGCATCGCCATGTCATGGCAGAATGGCACGAACTGCTGTGTGTGGGAGGGCATC
ACCTGCAATGAAGATGGGGCTGTCATTGAGGTTCGTCTCACCTCTAAAGGCCTTGAAGGG
CAAATCGCACCGTCGCTGGGAGAGCTCACCAGCTTGTCGCGCCTCAACCTGTCGTACAAC
TCCCTATCTGGCGGCCTTCCAGCAGAGCTGATGTCTTCTGGCAGCATTGTCGTCCTTGAT
GTCAGCTTCAATCGCCTCAACGGGGACCTGCAAGAGTTGAATCCATCAGTATCTGACAGG
CCACTGCAGGTACTGAATATCTCAAGCAACCGGTTTACAGGAGAATTTCCATCCATCACA
TGGGAGAAAATGAGGAACCTGGTCGCAATCAACGCGAGCAACAACAGTTTTACCGGGCAC
ATACCTTCCTCCTTCTGCAGCAATTCGCCATCTTTTGCTGTTCTTGATCTTGGGTACAAC
CAGTTCAGTGGCAACATCCCCCCTGGAATAGGTAAATGTTCTGCCCTTAGACTTCTCAAG
GCTAATGCCAACAACATCAGAGGGCCTCTCCCAGGTGATCTCTTCAATGCCACATCATTG
GAGTACCTCTCTTTCGCTAACAATGGATTGCAAGGAACAATTGATGATGCTCTCATCGTA
AAGCTCATCAATCTTGTTTTTGTTGATCTTGGATGGAATAGATTCAGTGGCAAGATCCCA
AATTCTATAGGCCAGTTGAAAAGACTAAAGGAGCTTCACATTTGCAGCAACAACTTATCT
GGAGAGCTGCCATCATCATTGGGAGATTGCACAAAACTAGTAACCATCAACCTCAGGGGA
AACAAGTTGACGGGTGAGCTTGCCAAGGTTAACTACTCCAATCTACCCAATCTGAAAACA
TTAGATTTTGCCTCGAATCACTTCACCGGCAAAATTCCAGAAAGCATATACTCATGTAGT
AATTTGACTTGGTTGCGGCTATCTTCCAATAGGCTTCACGGCCAGTTGACAAAGAACATA
CAGAATCTGAATTCTATCACCTTCTTATCTCTTTCCTACAACAATTTTACAAATATCAAA
AATACTCTTCACATACTCAAGAGCTTAAGGAACCTCAATGTCTTGTTAATTGGGGGCAAC
TTCATGCACGAAGCTATGCCACAGGATGAAACAATTGATGGTTTCGAGAATATTTTTGGT
ATTAGCATACATGATTGTGCATTGACTGGAAAAATACCTAGTTGGCTCTCAAAGCTCGGA
AATTTGGCAGTTTTAGATTTATCCAACAATAAACTCAGGGGACCTATACCAACCTGGATC
AATAGCCTAAACTTCCTTAAGTATGCAGACATATCCAATAATAGCCTTTCAGGAGAAATA
CCACAAGCACTAATGGAGATACCAATGCTAAAATCAGATAAGATTGCAGATAACTCAGAC
CCAAGAGCCTTTCCGTTTCCAGTGTATGCAGGCGCATGTCTGTGTTTTCAGTACCGTACA
GTTACTGCTTTCCCTAAAATGTTGAATCTAGGTAATAACAAATTCACTGGTGCGATCCCG
ATGGAGATTGGTGAGTTGAAAGCACTCGTTTCACTCAACTTGAGCTTCAACAACCTAAAC
AGGGAGATCCCACAATCGATCAGCAACCTCAAGAATCTGATGGTTCTAGACCTGTCATAC
AACCATCTGACAGGTGCAATCCCTCCAGCACTGGTGAACCTTCACTTCCTTTCTGAATTC
AATGTTTCCCACAATGATCTAAAAGGGTCTGTACCAATTGGAGGCCAGTTCAGCACATTT
CCAAGTTCTAGTTTTGCTGGAAACCCAGAGCTATGCAGCCCGATACTTTTGCACCGTTGC
AATGTAGCAGAAGTAGATTTGTCTTCCCCAAACTCAACAAAAGAGTACATCAACAAGGTC
ATCTTTGTGATTGCTTTTTGTGTATTCTTTGGAGTAGGAGTGCTATATGATCAGATAGTT
CTATCCAGATATTTTCGGTTGAACTGA