Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0152500-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:2876561:2882177:-1 gene:Os02g0152500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:leaf inclination2, Leaf Inclination 2, VIN3-LIKE 2, VERNALIZATION INSENSITIVE 3-LIKE 3 description:Chromatin remodeling factor, Protein containing PHD domain, FNIII domain and VID domain, Positive regulator of flowering, Regulation of leaf angle (Os02t0152500-01);Non-protein coding transcript. (Os02t0152500-02)
Sequence	ATGGATCCACCCTACGCAGGAGTACCTATTGATCCTGCTAAATGCCGATTGATGAGTGTG GATGAAAAGCGGGAACTTGTCCGTGAATTATCGAAGCGGCCAGAAAGTGCTCCTGACAAA CTGCAGTCTTGGAGTCGCCGTGAAATTGTAGAGATTCTTTGTGCTGATTTAGGAAGGGAA AGGAAGTACACTGGATTATCGAAGCAGAGAATGTTGGAATATCTCTTCAGAGTTGTGACT GGCAAATCATCTGGTGGTGGCGTTGTGGAGCATGTGCAAGAGAAGGAGCCTACCCCTGAA CCCAACACAGCCAACCATCAGTCCCCTGCGAAACGGCAGCGAAAGAGTGACAACCCATCA CGACTACCAATTGTTGCAAGCAGTCCAACTACAGAAATACCCAGGCCAGCAAGTAATGCT CGCTTCTGCCACAATTTAGCTTGCAGAGCGACTCTTAATCCAGAAGATAAATTTTGCAGA CGCTGTTCATGCTGTATTTGTTTCAAGTACGATGACAATAAGGATCCTAGCCTCTGGTTA TTCTGTAGTTCAGATCAACCCTTGCAGAAAGATTCTTGTGTATTTTCGTGCCATCTTGAA TGTGCTCTTAAGGATGGAAGAACTGGCATCATGCAGAGTGGGCAGTGCAAGAAACTTGAT GGTGGTTATTACTGCACTCGCTGTCGGAAACAGAATGATCTGCTTGGGTCCTGGAAGAAA CAACTGGTGATAGCTAAAGATGCTCGCCGGTTGGATGTATTGTGTCATCGGATTTTTTTG AGTCATAAGATTCTTGTCTCCACGGAGAAGTACTTGGTTTTGCATGAAATTGTTGACACA GCGATGAAGAAACTGGAGGCTGAGGTTGGTCCTATATCTGGAGTTGCAAATATGGGTCGT GGAATTGTGAGCCGGCTTGCTGTTGGTGCTGAAGTTCAGAAACTTTGTGCTCGAGCAATA GAAACCATGGAGTCTCTGTTTTGTGGATCTCCTTCTAACTTGCAATTTCAACGTTCACGG ATGATACCATCAAACTTCGTAAAGTTTGAAGCTATAACCCAAACATCTGTCACTGTAGTT TTGGATTTGGGTCCTATACTTGCTCAAGATGTAACATGCTTTAATGTATGGCACAGAGTG GCAGCCACAGGCTCGTTCTCATCAAGTCCAACTGGCATCATACTTGCACCATTAAAAACG TTAGTGGTCACTCAACTTGTGCCAGCTACAAGCTATATATTCAAGGTAGTTGCCTTCAGT AACTACAAGGAGTTTGGATCGTGGGAAGCCAAAATGAAGACAAGCTGTCAGAAGGAAGTT GATCTGAAGGGTTTGATGCCAGGTGGGTCTGGGCTAGACCAAAACAATGGGAGCCCAAAG GCAAACAGTGGTGGTCAGTCTGATCCTTCTTCAGAAGGTGTGGACTCAAATAATAACACT GCGGTGTATGCTGATCTCAATAAATCACCAGAAAGTGATTTTGAATATTGTGAAAATCCT GAGATACTTGATTCAGACAAAGCAAGTCATCACCCCAATGAACCTACAAACAACTCACAG AGTATGCCGATGGTCGTAGCTAGGGTTACGGAGGTATCTGGATTGGAGGAAGCTCCTGGA CTCTCAGCATCAGCTTTGGACGAGGAGCCCAATTCAGCAGTTCAAACACAATTACTTAGA GAATCCTCAAATTCAATGGAGCAGAACCAGAGAAGCGAAGTTCCTGGATCACAGGATGCA TCAAATGCTCCTGCTGGAAATGAGGTGGTGATTGTTCCACCTCGATATTCTGGCTCTATT CCACCAACTGCACCTAGATATATGGAAAATGGTAAGGATATCAGTGGGAGGAGCTTGAAA GCAAAACCTGGTGATAACATCCTTCAAAATGGCTCTTCCAAGCCTGAAAGGGAACCAGGG AATTCTTCAAATAAAAGAACATCAGGTAAATGTGAGGAAATCGGCCACAAGGATGGATGC CCAGAAGCATCTTATGAGTACTGTGTTAAGGTGGTCAGGTGGCTGGAATGTGAGGGTTAC ATTGAGACCAACTTCAGAGTGAAGTTTCTGACTTGGTATAGCCTTCGTGCTACCCCTCAT GACAGGAAGATAGTCAGCGTCTACGTAAACACTCTTATTGATGATCCTGTTAGCCTTTCT GGCCAGCTTGCTGACACTTTCTCTGAGGCCATCTACAGCAAAAGGCCACCTTCTGTTCGC TCCGGTTTCTGCATGGAACTTTGGCATTAA

Peptide Sequence

PEP ID	Os02t0152500-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:2876561:2882177:-1 gene:Os02g0152500 transcript:Os02t0152500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:leaf inclination2, Leaf Inclination 2, VIN3-LIKE 2, VERNALIZATION INSENSITIVE 3-LIKE 3 description:Chromatin remodeling factor, Protein containing PHD domain, FNIII domain and VID domain, Positive regulator of flowering, Regulation of leaf angle (Os02t0152500-01);Non-protein coding transcript. (Os02t0152500-02)
Sequence	MDPPYAGVPIDPAKCRLMSVDEKRELVRELSKRPESAPDKLQSWSRREIVEILCADLGRE RKYTGLSKQRMLEYLFRVVTGKSSGGGVVEHVQEKEPTPEPNTANHQSPAKRQRKSDNPS RLPIVASSPTTEIPRPASNARFCHNLACRATLNPEDKFCRRCSCCICFKYDDNKDPSLWL FCSSDQPLQKDSCVFSCHLECALKDGRTGIMQSGQCKKLDGGYYCTRCRKQNDLLGSWKK QLVIAKDARRLDVLCHRIFLSHKILVSTEKYLVLHEIVDTAMKKLEAEVGPISGVANMGR GIVSRLAVGAEVQKLCARAIETMESLFCGSPSNLQFQRSRMIPSNFVKFEAITQTSVTVV LDLGPILAQDVTCFNVWHRVAATGSFSSSPTGIILAPLKTLVVTQLVPATSYIFKVVAFS NYKEFGSWEAKMKTSCQKEVDLKGLMPGGSGLDQNNGSPKANSGGQSDPSSEGVDSNNNT AVYADLNKSPESDFEYCENPEILDSDKASHHPNEPTNNSQSMPMVVARVTEVSGLEEAPG LSASALDEEPNSAVQTQLLRESSNSMEQNQRSEVPGSQDASNAPAGNEVVIVPPRYSGSI PPTAPRYMENGKDISGRSLKAKPGDNILQNGSSKPEREPGNSSNKRTSGKCEEIGHKDGC PEASYEYCVKVVRWLECEGYIETNFRVKFLTWYSLRATPHDRKIVSVYVNTLIDDPVSLS GQLADTFSEAIYSKRPPSVRSGFCMELWH

Transcript Sequence

Transcript ID	Os02t0152500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:2876561:2882177:-1 gene:Os02g0152500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:leaf inclination2, Leaf Inclination 2, VIN3-LIKE 2, VERNALIZATION INSENSITIVE 3-LIKE 3 description:Chromatin remodeling factor, Protein containing PHD domain, FNIII domain and VID domain, Positive regulator of flowering, Regulation of leaf angle (Os02t0152500-01);Non-protein coding transcript. (Os02t0152500-02)
Sequence	GAGAGATAACTAGCAGAGCACTCGCGGAGGCGAGGAGAGAGAGAGAGAGAGAGAGAGGTT GGAAGAGGAGGGGAGAGTCCACGTGAGTGAGAGGAGGAGGAGGAGGAGGAGATCCCTCTC CCGCGCGCATCCGCCCCTCTCGCCGATCCCCAATTCGCCATGGATCCACCCTACGCAGGA GTACCTATTGATCCTGCTAAATGCCGATTGATGAGTGTGGATGAAAAGCGGGAACTTGTC CGTGAATTATCGAAGCGGCCAGAAAGTGCTCCTGACAAACTGCAGTCTTGGAGTCGCCGT GAAATTGTAGAGATTCTTTGTGCTGATTTAGGAAGGGAAAGGAAGTACACTGGATTATCG AAGCAGAGAATGTTGGAATATCTCTTCAGAGTTGTGACTGGCAAATCATCTGGTGGTGGC GTTGTGGAGCATGTGCAAGAGAAGGAGCCTACCCCTGAACCCAACACAGCCAACCATCAG TCCCCTGCGAAACGGCAGCGAAAGAGTGACAACCCATCACGACTACCAATTGTTGCAAGC AGTCCAACTACAGAAATACCCAGGCCAGCAAGTAATGCTCGCTTCTGCCACAATTTAGCT TGCAGAGCGACTCTTAATCCAGAAGATAAATTTTGCAGACGCTGTTCATGCTGTATTTGT TTCAAGTACGATGACAATAAGGATCCTAGCCTCTGGTTATTCTGTAGTTCAGATCAACCC TTGCAGAAAGATTCTTGTGTATTTTCGTGCCATCTTGAATGTGCTCTTAAGGATGGAAGA ACTGGCATCATGCAGAGTGGGCAGTGCAAGAAACTTGATGGTGGTTATTACTGCACTCGC TGTCGGAAACAGAATGATCTGCTTGGGTCCTGGAAGAAACAACTGGTGATAGCTAAAGAT GCTCGCCGGTTGGATGTATTGTGTCATCGGATTTTTTTGAGTCATAAGATTCTTGTCTCC ACGGAGAAGTACTTGGTTTTGCATGAAATTGTTGACACAGCGATGAAGAAACTGGAGGCT GAGGTTGGTCCTATATCTGGAGTTGCAAATATGGGTCGTGGAATTGTGAGCCGGCTTGCT GTTGGTGCTGAAGTTCAGAAACTTTGTGCTCGAGCAATAGAAACCATGGAGTCTCTGTTT TGTGGATCTCCTTCTAACTTGCAATTTCAACGTTCACGGATGATACCATCAAACTTCGTA AAGTTTGAAGCTATAACCCAAACATCTGTCACTGTAGTTTTGGATTTGGGTCCTATACTT GCTCAAGATGTAACATGCTTTAATGTATGGCACAGAGTGGCAGCCACAGGCTCGTTCTCA TCAAGTCCAACTGGCATCATACTTGCACCATTAAAAACGTTAGTGGTCACTCAACTTGTG CCAGCTACAAGCTATATATTCAAGGTAGTTGCCTTCAGTAACTACAAGGAGTTTGGATCG TGGGAAGCCAAAATGAAGACAAGCTGTCAGAAGGAAGTTGATCTGAAGGGTTTGATGCCA GGTGGGTCTGGGCTAGACCAAAACAATGGGAGCCCAAAGGCAAACAGTGGTGGTCAGTCT GATCCTTCTTCAGAAGGTGTGGACTCAAATAATAACACTGCGGTGTATGCTGATCTCAAT AAATCACCAGAAAGTGATTTTGAATATTGTGAAAATCCTGAGATACTTGATTCAGACAAA GCAAGTCATCACCCCAATGAACCTACAAACAACTCACAGAGTATGCCGATGGTCGTAGCT AGGGTTACGGAGGTATCTGGATTGGAGGAAGCTCCTGGACTCTCAGCATCAGCTTTGGAC GAGGAGCCCAATTCAGCAGTTCAAACACAATTACTTAGAGAATCCTCAAATTCAATGGAG CAGAACCAGAGAAGCGAAGTTCCTGGATCACAGGATGCATCAAATGCTCCTGCTGGAAAT GAGGTGGTGATTGTTCCACCTCGATATTCTGGCTCTATTCCACCAACTGCACCTAGATAT ATGGAAAATGGTAAGGATATCAGTGGGAGGAGCTTGAAAGCAAAACCTGGTGATAACATC CTTCAAAATGGCTCTTCCAAGCCTGAAAGGGAACCAGGGAATTCTTCAAATAAAAGAACA TCAGGTAAATGTGAGGAAATCGGCCACAAGGATGGATGCCCAGAAGCATCTTATGAGTAC TGTGTTAAGGTGGTCAGGTGGCTGGAATGTGAGGGTTACATTGAGACCAACTTCAGAGTG AAGTTTCTGACTTGGTATAGCCTTCGTGCTACCCCTCATGACAGGAAGATAGTCAGCGTC TACGTAAACACTCTTATTGATGATCCTGTTAGCCTTTCTGGCCAGCTTGCTGACACTTTC TCTGAGGCCATCTACAGCAAAAGGCCACCTTCTGTTCGCTCCGGTTTCTGCATGGAACTT TGGCATTAAAGAGAGGGGAGCTCGTACCGTTCTCTTTGTAGGGGAGCATATTTTGGTCCC ATTCTTTCGTAGCAGATCGTTGCATTGATTCTTCATTGGAAATTTCATTGAAGCGGTTAA CTTATACAATCTGTTCATTGCTCTACTTTATTTGCTATGACAGTAGGTTTAATTTATCCA GCAACTTATTTCTGTTTTTTCACTTAGGAGTCCATAGTTTACAGTTCTGTTATCCGTACC GCCATGTTGGTACAGAGCATCAAGAGCTGTGCTCTTTTGGTCAGCTTTAGGAACATTCTG AAATTGCCACAAGTGTGTGGGTACCTGAAGCTCTGTTGCTAGCTGCTGTGAGAGGGAGGG ATGATTCTCAGGATGTACCGGGAAACATTGGGATGAAGCAGGCTTCGTGTCGACACTGAC GAATCCGAGCTAACCATGCCTTGTCAGGATAAATGATGATGTGGTGCTGTATCTGGGGTT GAAAGAAATGCAAATGTGCTGCTGACTTCTATGGGGAATGGGAGGAGTCCTGATGTTTTT CCTTTTCTTAAGACAATAGATGCAAAATGTCTGCACTAATGTTATGTTCGGTTTAGACCC TTGCTTTTACTGTCTCCTACTGCACTTTCTTGCCTTCTAGTTCTACCGTTTGAGAAGTTA AATTTATGTGCACATGCAAAAAGGTTTGGACC