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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0152200-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:2865107:2868827:1 gene:Os02g0152200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1677, Oryza sativa family protein. (Os02t0152200-01);Protein of unknown function DUF1677, Oryza sativa family protein. (Os02t0152200-02)
Sequence

ATGGGTTCACTGCGGCGGGTTGTGCACCTGGTGACCGCATTGAACGGCAGCGCCAACCTC
CGCCACATCGACACGTCGCGTTTCTTCTCCCGCCGGCCGCCGCCGCCGTTCAGCCCGTCG
TCCATGGCGGTGGTGACGGAGGAATCCTCCTTGCCGGAGCCCTCCATGTCGTTCTACCCA
GCTCCGGCCCCGCCGGAGAGCAACGGCGACATCGGGGTGATGCTCTTCGGCCGCGCCCGC
GACAGGCTGCTGGTGACGGACCAGTCCGACAGCGCCGCCATCTACGACGCCGGCACGCAC
GCCCTGCTCGCGGAGACCACCCCGCTGAAACCCAAGTACTGGCCAGTCTCCGTCCCTGTA
GGCGACGACATCTACCTCTTCGACCTGTACCCCAGGGTGCCCTGCGGCGGCCGCCATTGC
TTCGAGGCTGTCACGGCGGTGGATTCCTCTTCTTCTTCTTACTGCTCCCGTGCGCTCCCG
CCGCCGCCATTCCTGTTTGCCCCGGGCTACAGCCCCAAGCCTATCGAGTCCTACACGGTG
GTCGGCGGATCGGAGGTGTGGATCTCCACGGCGCGCGCGGGCACCTACGCCTTCGACACG
GTTAGCTGCAGCTGGAGCAAGCAGGCCGACTGGCCGATGCCGTTCGCCGGCCTAGCGGAG
TACGTCCCCGAGCACAAGCTCTGGTTCGGGCTCTCCTCCTCCAGGAGGGACAAGCACCCG
CTCTGCGCCGTGGACCTCGCCGCCGCCGCCTCGCCGGAGACGGGGCCGGAGCTGACCAAC
GTGTGGATGGAGCTGTCAGTGCCGAGGGAATGGATCCCGGTCGAGGCCTTCCTTGTGCAC
CTTGGCTCTAGCAGGTTCTTCGTGGCCAGATTCTTCCAAGAGCTAGTCGAGGTGCGCTGC
GACTTCTCGCAGCGGTTCGACAGGTTCGCTGTCTTCACCGGCGTTGAGCTGGAGCGCACC
TCCCGTGGTGAGCTCCGGATGATCAAGCACAAGTCGGAGCGTTACAGCATCGCTCACAAA
GTCCTCTGCCATAGTGTTCTTTGA

Peptide Sequence

PEP ID

Os02t0152200-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:2865107:2868827:1 gene:Os02g0152200 transcript:Os02t0152200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1677, Oryza sativa family protein. (Os02t0152200-01);Protein of unknown function DUF1677, Oryza sativa family protein. (Os02t0152200-02)
Sequence

MGSLRRVVHLVTALNGSANLRHIDTSRFFSRRPPPPFSPSSMAVVTEESSLPEPSMSFYP
APAPPESNGDIGVMLFGRARDRLLVTDQSDSAAIYDAGTHALLAETTPLKPKYWPVSVPV
GDDIYLFDLYPRVPCGGRHCFEAVTAVDSSSSSYCSRALPPPPFLFAPGYSPKPIESYTV
VGGSEVWISTARAGTYAFDTVSCSWSKQADWPMPFAGLAEYVPEHKLWFGLSSSRRDKHP
LCAVDLAAAASPETGPELTNVWMELSVPREWIPVEAFLVHLGSSRFFVARFFQELVEVRC
DFSQRFDRFAVFTGVELERTSRGELRMIKHKSERYSIAHKVLCHSVL

Transcript Sequence

Transcript ID

Os02t0152200-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:2865107:2868827:1 gene:Os02g0152200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1677, Oryza sativa family protein. (Os02t0152200-01);Protein of unknown function DUF1677, Oryza sativa family protein. (Os02t0152200-02)
Sequence

CCGCCGCCGCCGCCGCCGCCCGCCGCGCTACCACCTGTTGCTCGTACGATCGGATTCAAA
TTGTCGCTTCTTTCTTCTTCCACAGCACAGGACGGGGTGTAGAAGAAGAAGAAGAAGAGC
ATCAAGAGGATGGGTTCACTGCGGCGGGTTGTGCACCTGGTGACCGCATTGAACGGCAGC
GCCAACCTCCGCCACATCGACACGTCGCGTTTCTTCTCCCGCCGGCCGCCGCCGCCGTTC
AGCCCGTCGTCCATGGCGGTGGTGACGGAGGAATCCTCCTTGCCGGAGCCCTCCATGTCG
TTCTACCCAGCTCCGGCCCCGCCGGAGAGCAACGGCGACATCGGGGTGATGCTCTTCGGC
CGCGCCCGCGACAGGCTGCTGGTGACGGACCAGTCCGACAGCGCCGCCATCTACGACGCC
GGCACGCACGCCCTGCTCGCGGAGACCACCCCGCTGAAACCCAAGTACTGGCCAGTCTCC
GTCCCTGTAGGCGACGACATCTACCTCTTCGACCTGTACCCCAGGGTGCCCTGCGGCGGC
CGCCATTGCTTCGAGGCTGTCACGGCGGTGGATTCCTCTTCTTCTTCTTACTGCTCCCGT
GCGCTCCCGCCGCCGCCATTCCTGTTTGCCCCGGGCTACAGCCCCAAGCCTATCGAGTCC
TACACGGTGGTCGGCGGATCGGAGGTGTGGATCTCCACGGCGCGCGCGGGCACCTACGCC
TTCGACACGGTTAGCTGCAGCTGGAGCAAGCAGGCCGACTGGCCGATGCCGTTCGCCGGC
CTAGCGGAGTACGTCCCCGAGCACAAGCTCTGGTTCGGGCTCTCCTCCTCCAGGAGGGAC
AAGCACCCGCTCTGCGCCGTGGACCTCGCCGCCGCCGCCTCGCCGGAGACGGGGCCGGAG
CTGACCAACGTGTGGATGGAGCTGTCAGTGCCGAGGGAATGGATCCCGGTCGAGGCCTTC
CTTGTGCACCTTGGCTCTAGCAGGTTCTTCGTGGCCAGATTCTTCCAAGAGCTAGTCGAG
GTGCGCTGCGACTTCTCGCAGCGGTTCGACAGGTTCGCTGTCTTCACCGGCGTTGAGCTG
GAGCGCACCTCCCGTGGTGAGCTCCGGATGATCAAGCACAAGTCGGAGCGTTACAGCATC
GCTCACAAAGTCCTCTGCCATAGTGTTCTTTGATTTCACAACGTCCTCATCGTACCTATT
TCCTCCGTTTCATATTGTAAGACTTTTTAGCATTACCGACATTAATATATATATTAATGA
ATCTAGACATATATACATGTTTAGATTCATTAACATCTATATAAATGTGGGAAATACTAG
AAAGTCTTGTAATATGAAACGGAGGGAGTATATATATGTCTAGATTCATTAGCATACGTA
TGAATGTCGGCAATGCTAAAAAGTCTTATAATATAAAACGGAGGGAGTATCTATGATAAG
GCATGTAAACAATCAATTATTTGGTTGGTGAAGATGAGTTAGCTGGAGTATTTTGAAATT
ATGCAATTTCTTGTAATACTCTGTATTTTCAAACAGGAAATTGGAAAATAGATGCTCCCT
CTTTAGTTCATTGGCAAAAAAGAAGTGAATATTGTTTTGTTCATTTGGCCTGTCTCTAGA
CTATAATGAATACTCAGGAGTATCATTCATTGCATTGCCATCGATTGAATTTTCATTACA
TTGCCAACATTCGAATCACACAACTTTTAAAGTTTGCATGCAGATGTTTTAGCATGGCAT
TGTTTCCCGTCTGTTACTATTAATCTTGGGATTGAGTTGAGTCTCTGAATGTGGCAATTA
GTCTAGAGTTGGTTTTTTTAGGTTCCTCAAAATTGTGTATGTAATGGGGGTGTTACTTTG
CTGGTGATGAATACAATGACATATTCACATCCATATAGGCATCAGGGGCATTTCTTTGCT
GAGATATATTAACATATTCACATCCATATATGTTGGGAATAAATGGCACCCATGCCAACT
GAAAACACCACTTTTTAGGTTAGATTTGTCGCAGTGCATCACGTTTCGTCGTTTCTGTTT
GTCTTGCCATTCAAAGCATGCACCTCAAGTTGTTTCCTAGCTGAGTCTATAGAAGGAGCT
AGGCAGCTAGCCTATAAAAGTGATTAGATTTACTTTGATTCTTTGAAGAAGACAATCTCA
ATCCATTTTATTCTCAAGCCGTTGATCAACTATAATTGTTTTTTACATATAGATTGTTCT
GGTTCTCAAACTATCCTGAAAACTTTATGCATTTTTTTCTAATCTTAATTAAATCGGTAG
CACTCCTGTCTCCCATTGTTCCTTTTCTTTTTTTAATGTCACTACCTAACTGAAGCTTAG
GAGCAATAGAACAGAACTTTGAACTTAGGAGCAGTAGAACAGAAGGCGCTGGATGGATAG
AACTGAACCGTGAGCTTAGGAGCAATAGATCAGAATGTGCTGTATGGTTGGGCCTCCTAT
TATTGAGATTGTCCGGTGTTCCATGTGCGTGTGCACTGGGAGTGGCTTTGTCAGAATTCT
TGTTCGACTTGATCTTTGGCTTAAGTGAATCTAATGTCAAGCAATTTATGTGCCACCCTT
TCTCTAACATAGTGGTATACTCCAATCTCAACTAGCAAAGACTGACCTGGCTACTGTGTG
CTGGTTTCTTGAGCTCCATGAGACCAAGTTTTTGCCAGGAAAAGCTGCAAATCGTCCAGT
AGAACATGTGTCATTGAGGCATCTGGATCAAGCTGCATCAACCAATGTATATGAACTGCA
ACAATTGGCAACAACGACCCTCCAGTACAGTAACTTGTTCAGGTGATGGAAGGGAAGCTT
CTTAGCCCAGTTGGGCAATTTTTCTGAAGTTAACATAGGTTGGTTATTGAACAACATTCG
TCATCCTAACATGGTTCAGCAGCAACTCCACACCAGACAAGACTCCAGTTCTTCCATCCG
TGACTCTTCAAGAGACCCAAGCTTCAAACTGCCATGTGAATCGATCGGTCTGTCAACAAG
CGGAGGCGTCCATCAACCGTAGGATATGATTGTTGGCTGCAGCCAAAAATTACAAAAAAA
AATTGATATGTTTGCACTGAACTGGAGATTAAGCAGTTAATCTGTTCTTCAGATTACTTC
AAGCCGGTGAAGCAAAGAGGCAATTATGAATACCATCACATTTC