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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0149900-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:2757660:2758714:1 gene:Os02g0149900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 26 description:Putative homeobox-leucine zipper protein HOX26. (Os02t0149900-00)
Sequence

ATGTCGAGCTCGAGCTTGACGACGACCAGCAGCATGGACTCCGTCGTCGACGGCGGCCTC
GACACGCGCCTCTCTCTCGCCGTCGGCTGCTGCCCGCCGCGGAGGAGGCCGGTGTTGCTG
TTCGGTGAGGTGCTCCCGTCGCCGGAGAAGAAGGTGGCGGCGGCGGCGGTGGTGGCTGCT
GGGAAGCGAGGCCGAGAGCAGAGGGGTGAGGCTGAGGCTGAAGCTACGACGACGAGGCAG
CGGCGGAGCTGCAAGAAGGGCAGGAGGGGGAGGGGAGACGACGATGACGACGACGGTGAT
CGCCGGAGCCCGAGCGGCGGCGGCGGTGACGAGGAAGGCGCGAGCAGGAAGAAGCTCCGG
CTCACCGGCGAGCAGGCCACGCTTCTCGAGGACAGCTTCCGCGCCCACAACATCCTCTCC
CATGCGGAGAAGCAGGAGCTGGCGGGGAAGCTGGGGCTGAGCGCGAGGCAGGTGGAGGTG
TGGTTCCAGAACAGGAGGGCGAGGACGAAGCTGAAGCAGACGGAGGCCGACTGCGACCTG
CTCCGCCGCTGGTGCGACCACCTCGCCGCCGACAACGCCCGCCTCCGCCGCGACCTCGCC
GAGCTGCGCCGCTCCTCCTCCTCGCCGCCGGTGTCCGGCCTCGCCGTGGCCACGCCCGTC
GTCTGCCCCTCCTGCGCCCACGACGACAAGCGCCGCCTCGCCTTCGCCACCGCCGCCGCC
GCCGCCGGCGACATGGCCAGTAACTGA

Peptide Sequence

PEP ID

Os02t0149900-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:2757660:2758714:1 gene:Os02g0149900 transcript:Os02t0149900-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 26 description:Putative homeobox-leucine zipper protein HOX26. (Os02t0149900-00)
Sequence

MSSSSLTTTSSMDSVVDGGLDTRLSLAVGCCPPRRRPVLLFGEVLPSPEKKVAAAAVVAA
GKRGREQRGEAEAEATTTRQRRSCKKGRRGRGDDDDDDGDRRSPSGGGGDEEGASRKKLR
LTGEQATLLEDSFRAHNILSHAEKQELAGKLGLSARQVEVWFQNRRARTKLKQTEADCDL
LRRWCDHLAADNARLRRDLAELRRSSSSPPVSGLAVATPVVCPSCAHDDKRRLAFATAAA
AAGDMASN

Transcript Sequence

Transcript ID

Os02t0149900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:2757660:2758714:1 gene:Os02g0149900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 26 description:Putative homeobox-leucine zipper protein HOX26. (Os02t0149900-00)
Sequence

ATGTCGAGCTCGAGCTTGACGACGACCAGCAGCATGGACTCCGTCGTCGACGGCGGCCTC
GACACGCGCCTCTCTCTCGCCGTCGGCTGCTGCCCGCCGCGGAGGAGGCCGGTGTTGCTG
TTCGGTGAGGTGCTCCCGTCGCCGGAGAAGAAGGTGGCGGCGGCGGCGGTGGTGGCTGCT
GGGAAGCGAGGCCGAGAGCAGAGGGGTGAGGCTGAGGCTGAAGCTACGACGACGAGGCAG
CGGCGGAGCTGCAAGAAGGGCAGGAGGGGGAGGGGAGACGACGATGACGACGACGGTGAT
CGCCGGAGCCCGAGCGGCGGCGGCGGTGACGAGGAAGGCGCGAGCAGGAAGAAGCTCCGG
CTCACCGGCGAGCAGGCCACGCTTCTCGAGGACAGCTTCCGCGCCCACAACATCCTCTCC
CATGCGGAGAAGCAGGAGCTGGCGGGGAAGCTGGGGCTGAGCGCGAGGCAGGTGGAGGTG
TGGTTCCAGAACAGGAGGGCGAGGACGAAGCTGAAGCAGACGGAGGCCGACTGCGACCTG
CTCCGCCGCTGGTGCGACCACCTCGCCGCCGACAACGCCCGCCTCCGCCGCGACCTCGCC
GAGCTGCGCCGCTCCTCCTCCTCGCCGCCGGTGTCCGGCCTCGCCGTGGCCACGCCCGTC
GTCTGCCCCTCCTGCGCCCACGACGACAAGCGCCGCCTCGCCTTCGCCACCGCCGCCGCC
GCCGCCGGCGACATGGCCAGTAACTGA