Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0149600-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:2728878:2734454:1 gene:Os02g0149600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-like domain containing protein. (Os02t0149600-01)
Sequence	ATGGCGGACGTGCTCCTCCCGGAGCTCCGCTCTCCTCCTCCTCCGCCGCCGCCGCCGCCA CCGACAAATGATGATCGCGCGCGGGCGGTGGACCTGCCATCGCCGACTCCGGAGTGTGAC GATCGCTCGCCGCGTCGTGAGCTGGGGCGCTCGCCGGAGGATCACGGCGTGCCGCTCCCT CCCCCGCCACCGCTCGGCTCCTCGCGCCCCGAGCGCCTCGCCAGCGATCGTCCGGAGGAG GGCGCCTCCGCCGCCGCGCAGCCGTGTGGCGGAAGGAGTGAGAGCCCCACGGCGAGGTCC ATGTGGCCGCGGAGGCTCTCCCCTGCGTCGTTGCCGCCGCGTGGCGGGAGGAGGAGCGAG AGCCCCACGCCGAGGTCCATCTGGCGGCGGCTCTCCCCGTCCCCGCCCCCGCCGCTGCCG CCCTTGCCTCCCAAGCGGCCGCGCTTGGACGGCCGCCGTAGCCCACCGCGCGGTGGGAGA TTCGGATTCGAGCACGAGCGAGGCAGGGAAAGGAGCATGAACACTTCGCGTCGCGCTCCA GATTGCCTGGATTCTGGATGTGATGCCCCCTATAATGGTCAAAGTAACACCCGGAGGAAA GGATTGATGACATACAAACAGTTTACCCAAAAACTTGAAGATGATGTTTCACCGGGTGAA GCTGAGAGCAGGTACCAAGAATACAAGACATCATACATTACTTCTCAGAAACAGGATTAT TTTGATCACCATAAGAATGAAGATCGTTTGAAAGACATGTACCACCCAACAAACTTATTA TCTGTTATTGAAAGGCGGAATGAACTTTGCAAGGCTGCAGCGAAGAATTTGATTCTTGAT TTGCGGAGTGGAACTTTGGACCTTGGTCCTGGAATGACTGCTGGTACAGCAAGTAAATCA GGAAATGACAGTGATGGAATCCCTGCAGATGATGAAGATTATCACAACAAGAGAAGAAGG CATCACAGAGGTCCCCTGGAAGAAACTGAACTAGTTTCAGTTGCTCCTAAAGCTCACCCA GTCAGTTCGCATTATCGACGAATTCAAACTGACATACATCAAACTCTAGCCTTAGTGAAG AAGCTTGATGAAGAGAAGGGTATTGTGGGAAACATCCTGACAACTGGTGATCACACAAAG TCAAATGGTGACAAATCATATGCTGGATCTACAGGGCCTTTAGTTATTGTCCGGGGCTTA TCAACTGTTAAGGGCCTTGATGGTTTTGAGCTCCTAGACACTCTCCTTACTTATTTGTGG CATGTCCATGGTATTGATTACTATGGGATGTCTGAGAGTACAAATGCAAAAGGTCTTCGT CATGTGAGAGCTGATACGAAGAATGCCAACATGGACAAAAGCAGCGCTGCTGATTGGGAG AAGAAACTGGATTATTTCTGGCAAGAGAGACTGACAAACGGCAAGGATCCTCTAGTTGCA TTGACTGCCAAGGATAAAATTGATGCATCAGCTGATAAAGTTCTAGAATCTTATGTCACA AAGGTTAAGGATGATAACTACGGATGGACATACGGCTGTGGAGCCAAAGGATGTATAAAA GTTTTCCATGCTCCTGACTTTGTTCTCAAACATCTGAACCTCAAGCATCCTGATTTGGTC TCCAAATTGACTTCAAGAGTCCAAGAGGATATCTATTTCCAAAATTATATGAATGATCCA AATGCTCCAGGTGGCACACCAGTTATGCAGCAACAATCACCAGAGCAGCAAGGACCTACA CCTTCTGAACTAACGCCTGGTGCTTTTGGCGGGCAGGGTTCCTTCGTTGAAATGCCCACT CCACCAGTACTAATACCTGTGCCTGGTGCTGGTCCATTGGGTCCATTTGTTCCTGCACCT CCAGAGGTAGTCATGCAGATGATGCGACCAGTGATGCCCATGTATCCGCCTCGTCCGCCT AACCCTCGTCGTCTGCGAAGCTACAAAGATCTTGACGCTCCTGATGATGAAGTCACTCTC GTGGACTACAGAAGTTTGTAG

Peptide Sequence

PEP ID	Os02t0149600-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:2728878:2734454:1 gene:Os02g0149600 transcript:Os02t0149600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-like domain containing protein. (Os02t0149600-01)
Sequence	MADVLLPELRSPPPPPPPPPPTNDDRARAVDLPSPTPECDDRSPRRELGRSPEDHGVPLP PPPPLGSSRPERLASDRPEEGASAAAQPCGGRSESPTARSMWPRRLSPASLPPRGGRRSE SPTPRSIWRRLSPSPPPPLPPLPPKRPRLDGRRSPPRGGRFGFEHERGRERSMNTSRRAP DCLDSGCDAPYNGQSNTRRKGLMTYKQFTQKLEDDVSPGEAESRYQEYKTSYITSQKQDY FDHHKNEDRLKDMYHPTNLLSVIERRNELCKAAAKNLILDLRSGTLDLGPGMTAGTASKS GNDSDGIPADDEDYHNKRRRHHRGPLEETELVSVAPKAHPVSSHYRRIQTDIHQTLALVK KLDEEKGIVGNILTTGDHTKSNGDKSYAGSTGPLVIVRGLSTVKGLDGFELLDTLLTYLW HVHGIDYYGMSESTNAKGLRHVRADTKNANMDKSSAADWEKKLDYFWQERLTNGKDPLVA LTAKDKIDASADKVLESYVTKVKDDNYGWTYGCGAKGCIKVFHAPDFVLKHLNLKHPDLV SKLTSRVQEDIYFQNYMNDPNAPGGTPVMQQQSPEQQGPTPSELTPGAFGGQGSFVEMPT PPVLIPVPGAGPLGPFVPAPPEVVMQMMRPVMPMYPPRPPNPRRLRSYKDLDAPDDEVTL VDYRSL

Transcript Sequence

Transcript ID	Os02t0149600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:2728878:2734454:1 gene:Os02g0149600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-like domain containing protein. (Os02t0149600-01)
Sequence	CTCCTCCTCCGCTCCAATGGCGGACGTGCTCCTCCCGGAGCTCCGCTCTCCTCCTCCTCC GCCGCCGCCGCCGCCACCGACAAATGATGATCGCGCGCGGGCGGTGGACCTGCCATCGCC GACTCCGGAGTGTGACGATCGCTCGCCGCGTCGTGAGCTGGGGCGCTCGCCGGAGGATCA CGGCGTGCCGCTCCCTCCCCCGCCACCGCTCGGCTCCTCGCGCCCCGAGCGCCTCGCCAG CGATCGTCCGGAGGAGGGCGCCTCCGCCGCCGCGCAGCCGTGTGGCGGAAGGAGTGAGAG CCCCACGGCGAGGTCCATGTGGCCGCGGAGGCTCTCCCCTGCGTCGTTGCCGCCGCGTGG CGGGAGGAGGAGCGAGAGCCCCACGCCGAGGTCCATCTGGCGGCGGCTCTCCCCGTCCCC GCCCCCGCCGCTGCCGCCCTTGCCTCCCAAGCGGCCGCGCTTGGACGGCCGCCGTAGCCC ACCGCGCGGTGGGAGATTCGGATTCGAGCACGAGCGAGGCAGGGAAAGGAGCATGAACAC TTCGCGTCGCGCTCCAGATTGCCTGGATTCTGGATGTGATGCCCCCTATAATGGTCAAAG TAACACCCGGAGGAAAGGATTGATGACATACAAACAGTTTACCCAAAAACTTGAAGATGA TGTTTCACCGGGTGAAGCTGAGAGCAGGTACCAAGAATACAAGACATCATACATTACTTC TCAGAAACAGGATTATTTTGATCACCATAAGAATGAAGATCGTTTGAAAGACATGTACCA CCCAACAAACTTATTATCTGTTATTGAAAGGCGGAATGAACTTTGCAAGGCTGCAGCGAA GAATTTGATTCTTGATTTGCGGAGTGGAACTTTGGACCTTGGTCCTGGAATGACTGCTGG TACAGCAAGTAAATCAGGAAATGACAGTGATGGAATCCCTGCAGATGATGAAGATTATCA CAACAAGAGAAGAAGGCATCACAGAGGTCCCCTGGAAGAAACTGAACTAGTTTCAGTTGC TCCTAAAGCTCACCCAGTCAGTTCGCATTATCGACGAATTCAAACTGACATACATCAAAC TCTAGCCTTAGTGAAGAAGCTTGATGAAGAGAAGGGTATTGTGGGAAACATCCTGACAAC TGGTGATCACACAAAGTCAAATGGTGACAAATCATATGCTGGATCTACAGGGCCTTTAGT TATTGTCCGGGGCTTATCAACTGTTAAGGGCCTTGATGGTTTTGAGCTCCTAGACACTCT CCTTACTTATTTGTGGCATGTCCATGGTATTGATTACTATGGGATGTCTGAGAGTACAAA TGCAAAAGGTCTTCGTCATGTGAGAGCTGATACGAAGAATGCCAACATGGACAAAAGCAG CGCTGCTGATTGGGAGAAGAAACTGGATTATTTCTGGCAAGAGAGACTGACAAACGGCAA GGATCCTCTAGTTGCATTGACTGCCAAGGATAAAATTGATGCATCAGCTGATAAAGTTCT AGAATCTTATGTCACAAAGGTTAAGGATGATAACTACGGATGGACATACGGCTGTGGAGC CAAAGGATGTATAAAAGTTTTCCATGCTCCTGACTTTGTTCTCAAACATCTGAACCTCAA GCATCCTGATTTGGTCTCCAAATTGACTTCAAGAGTCCAAGAGGATATCTATTTCCAAAA TTATATGAATGATCCAAATGCTCCAGGTGGCACACCAGTTATGCAGCAACAATCACCAGA GCAGCAAGGACCTACACCTTCTGAACTAACGCCTGGTGCTTTTGGCGGGCAGGGTTCCTT CGTTGAAATGCCCACTCCACCAGTACTAATACCTGTGCCTGGTGCTGGTCCATTGGGTCC ATTTGTTCCTGCACCTCCAGAGGTAGTCATGCAGATGATGCGACCAGTGATGCCCATGTA TCCGCCTCGTCCGCCTAACCCTCGTCGTCTGCGAAGCTACAAAGATCTTGACGCTCCTGA TGATGAAGTCACTCTCGTGGACTACAGAAGTTTGTAGATGCGCGTTTCGTGTTAACCAGC AGCCAGCAGGCTAATTCGGTGATGGTTCCTCCAGACAGCGTAAAATTTTTCTAACAACTG ATATGAAAGCACGATTACTTCCCGTTGCTGCCACAATGAGGAGACGGACGACGGATAGGA AATTTTCGTCACGTCTGACACTTAAGATGCGTGTCGCTTGAACGATCAACCATTCTATCA TACATACATTGATCTGCCCCTGTGTTTTCTGATACTTGAATGGGCAACAGAAGTTACGGG ATTAACATGATCTAATTTGCCACTGTACATGTTTGCTGCAGGATGATGGAAAACTAGTTA TTCTTCCCTCTTCTTAGACATGTTCTTTTGGATGCACTCCGTTTAACACCCTATATGAAG CGAGAAAGACCTCTTTCTTCTTTTTTTTCCTATTAACTATATATCTGTCTGGTGGATAAT GGTTTGCTTAACACAGACCGCGTTACAAT