Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0146700-02
CDS Infomation	cds chromosome:IRGSP-1.0:2:2563699:2571143:1 gene:Os02g0146700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os02t0146700-01);Similar to PSMD2 subunit (Fragment). (Os02t0146700-02)
Sequence	ATGGCGCCGCCCGAGAACCCCAACGGCGCGGGCCCCGCGGCGCCGTCCGACCCCGCGCAG CCGCAGCCGCAGCCGCCGGCCAAGTCCAAGTGGAAGAAGAAGGACGAGAAGAAGGATGAC GATCTGTCGGAGGAGGATTTGGCGCTCAAGGAGCAGCTCGAGCTCTACGTGGTTCGGGCG CAGGACGCGGATCCCGGCGTGCAGAAGCTCGCGCTTGAGAGTATGAGGCAGGAGATTCGT TCCGCCACAAGCTCAATGACATCTGTACCAAAGCCACTGAAATTCCTCCGGCCACACTAT GGAACACTCAAGTCTTACTTTGAAACCATGCCAGAATCTTCTGATTTGAAGAGGTACATG GCCGACATTTTATCAGTGTTAGCTTTGACAATGTCCGCTGAAGGAGAAAGAGAAAGCCTT AAGTACCGTTTGTTGGGCTCTGAAGGTGATATCGGTTCATGGGGTCATGAATACGTAAGA AATTTGGCAGGCGAAATTGCACAAGAATTCCAAAAGCGTCAGGATGATGACATGCCGATT GACGCTCTTATGGAACTAGTGCAGCAAATTGTTTCATTCCATATGAAGCATAATGCTGAA CCTGAAGCAGTTGATCTTCTGATGGAGGTGGAAGATCTTGATTTGCTAGTTGAGCATGTT GACTCTACGAACTACAAAAGAACTTGCTTGTACCTTACAAGTTCATCGAAATACCTCCCT GCTCCTGATGACATGTTGGCGCTTGACATTGCTTATACCATTTACATGAAGTTTGAAGAC CTTACAAGTGCTTTGCGGATTGCTCTGCTCCTTGACAACAAGTCAATGCAGTATGTGAAG CAGGTCTACACCGCAACTGAGGATCTTCAGCTCAAAAAGCAGTTCTCATTCATCATTGCA CGCCATGGTTTGGCCATGGAGATTGACGACGAGATAGCTGCCGATGGCAATGATAAGGAG GGTTTGCAAGAAATCGTTAATAATAGTAAGCTGAGTGAGGGGTACCTCACCCTTGCTCGA GATATCGAAGTGATGGAAGCAAAATCTCCAGAGGATATATATAAGGTCCATTTAATTGAT GGGCGTGGTGCCAGCTCCAGTCTTGATTCTGCAAGACAAAATTTAGCTGCAACATTTGTA AATGCATTCGTAAATGCTGGATTTGGTCAGGATAAGTTGATGACTGCTCCATCTGATTCT TCCAGTAGCGGAGCTTCTGGAAACTGGTTATTCAAGAACAAGGAACATGGGAAAGCCAGC GCAGCAGCTAGCCTGGGAATGATTCTCTTGTGGGATACTGATTCTGGACTTGCTCAGCTT GACAAGTACTTACATAGTAATGATGCTCATGTTGTTGCTGGAGCTTTGCTAGGTATTGGT ATTGTCACATGTGGTGTGAAGAATGATTGTGATCCAGCACTTGCTATTCTCATGGAGTAC ATTAACAAGGATGACACAAACATTCGGATTGGGGCAATCTTGGGTCTTGGTATTGCATAT GCGGGTTCTCAGAAAGAGGAGCTTAAATCTTATCTATCAACTGTGTTGGGGGACTCTGAG AAATCAACTCTTGAGGTCCTGATATTCTCCGCCATCGCTCTGGGATTGGTGTTTGTTGGT TCTTGCAATGAAGAGATTGCTCAATCTATCATATTTGCCTTGATGGAGCGCAGTGAGGCT GAGCTGGCAGAACCCATTATACGCCTGCTTCCTGTTGCGCTTGGTCTTCTGTATCTTGGA AAGCAGGAGAGTGTAGAGGCTACGGCAGAAGTTTCTAAAACATTTGATGAGAAGATAAGA AAGTACTGTGATGTAACACTTATGTCACTAGCATATGCTGGAACAGGAAATGTGCTCAAG GTTCAAAAGCTCCTTGGGATTTGCTCACAGCATCTTGAGAAAGGTGAAACCCACCAGGGG CCAGCTGTCCTAGGAATTGCGCTTATTGCAATGGCTGAAGAATTAGGAGCTGAGATGGCT GTACGGTCACTTGAGCGTCTTTTACAGTATGGCGAGCAGAATATTAGACGGGCAGTTCCT CTTGCTCTTGGCATACTCTGCATATCTAATCCGAAGGTAAATGTTATGGACACGCTTAGC AGACTGAGTCATGATGCGGATGCTGATGTGTCAATGGCTGCAATCATTTCATTGGGTTTC ATTGGTGCTGGTACAAACAATGCTAGAATAGCTGGTATGCTTCGCAATCTTTCAAGTTAC TATTACAAAGAAGCTGCGCATCTGTTTTGTGTAAGAATTGCTCAAGGACTTGTTCACCTT GGGAAGGGTTTGTTGACTCTCTCTCCATACCATTCTGACCGGTTTCTACTTTCCCCAATG GCCCTTGGAGGCCTTGTTACTGTATTGCATGCTTGCCTCGATATGAAATCCACCATTCTA GGGAAATACCACTACATTCTTTACATTATCGTCTTGGCGATGCAGCCTAGAATGCTTTTA ACGGTGGATGAGGATCTAAAGCCCCTATCTGTTCCAGTACGGGTTGGGCAAGCTGTTGAT GTGGTTGGTCAGGCTGGAAGGCCCAAGACAATTACTGGTTTCCAAACACATTCGACACCC GTATTGCTTGCAGCAGGGGAACGGGCTGAATTAGCAACCGAAAAATACATTCCGCTGACT TCGGTATTGGAGGGCTTTGTAATTCTGAAGAAGAACCCGGAATATAACGAGGAGTGA

Peptide Sequence

PEP ID	Os02t0146700-02
PEP Infomation	pep chromosome:IRGSP-1.0:2:2563699:2571143:1 gene:Os02g0146700 transcript:Os02t0146700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os02t0146700-01);Similar to PSMD2 subunit (Fragment). (Os02t0146700-02)
Sequence	MAPPENPNGAGPAAPSDPAQPQPQPPAKSKWKKKDEKKDDDLSEEDLALKEQLELYVVRA QDADPGVQKLALESMRQEIRSATSSMTSVPKPLKFLRPHYGTLKSYFETMPESSDLKRYM ADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEFQKRQDDDMPI DALMELVQQIVSFHMKHNAEPEAVDLLMEVEDLDLLVEHVDSTNYKRTCLYLTSSSKYLP APDDMLALDIAYTIYMKFEDLTSALRIALLLDNKSMQYVKQVYTATEDLQLKKQFSFIIA RHGLAMEIDDEIAADGNDKEGLQEIVNNSKLSEGYLTLARDIEVMEAKSPEDIYKVHLID GRGASSSLDSARQNLAATFVNAFVNAGFGQDKLMTAPSDSSSSGASGNWLFKNKEHGKAS AAASLGMILLWDTDSGLAQLDKYLHSNDAHVVAGALLGIGIVTCGVKNDCDPALAILMEY INKDDTNIRIGAILGLGIAYAGSQKEELKSYLSTVLGDSEKSTLEVLIFSAIALGLVFVG SCNEEIAQSIIFALMERSEAELAEPIIRLLPVALGLLYLGKQESVEATAEVSKTFDEKIR KYCDVTLMSLAYAGTGNVLKVQKLLGICSQHLEKGETHQGPAVLGIALIAMAEELGAEMA VRSLERLLQYGEQNIRRAVPLALGILCISNPKVNVMDTLSRLSHDADADVSMAAIISLGF IGAGTNNARIAGMLRNLSSYYYKEAAHLFCVRIAQGLVHLGKGLLTLSPYHSDRFLLSPM ALGGLVTVLHACLDMKSTILGKYHYILYIIVLAMQPRMLLTVDEDLKPLSVPVRVGQAVD VVGQAGRPKTITGFQTHSTPVLLAAGERAELATEKYIPLTSVLEGFVILKKNPEYNEE

Transcript Sequence

Transcript ID	Os02t0146700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:2563699:2571143:1 gene:Os02g0146700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os02t0146700-01);Similar to PSMD2 subunit (Fragment). (Os02t0146700-02)
Sequence	ACACCCAGCGGCGGCGGCGGCGCCCGCGGATTTCTCGCTCGCGCCTCCGAAACCCTAGCT CTCGCCCGTAGTAGCCATGGCGCCGCCCGAGAACCCCAACGGCGCGGGCCCCGCGGCGCC GTCCGACCCCGCGCAGCCGCAGCCGCAGCCGCCGGCCAAGTCCAAGTGGAAGAAGAAGGA CGAGAAGAAGGATGACGATCTGTCGGAGGAGGATTTGGCGCTCAAGGAGCAGCTCGAGCT CTACGTGGTTCGGGCGCAGGACGCGGATCCCGGCGTGCAGAAGCTCGCGCTTGAGAGTAT GAGGCAGGAGATTCGTTCCGCCACAAGCTCAATGACATCTGTACCAAAGCCACTGAAATT CCTCCGGCCACACTATGGAACACTCAAGTCTTACTTTGAAACCATGCCAGAATCTTCTGA TTTGAAGAGGTACATGGCCGACATTTTATCAGTGTTAGCTTTGACAATGTCCGCTGAAGG AGAAAGAGAAAGCCTTAAGTACCGTTTGTTGGGCTCTGAAGGTGATATCGGTTCATGGGG TCATGAATACGTAAGAAATTTGGCAGGCGAAATTGCACAAGAATTCCAAAAGCGTCAGGA TGATGACATGCCGATTGACGCTCTTATGGAACTAGTGCAGCAAATTGTTTCATTCCATAT GAAGCATAATGCTGAACCTGAAGCAGTTGATCTTCTGATGGAGGTGGAAGATCTTGATTT GCTAGTTGAGCATGTTGACTCTACGAACTACAAAAGAACTTGCTTGTACCTTACAAGTTC ATCGAAATACCTCCCTGCTCCTGATGACATGTTGGCGCTTGACATTGCTTATACCATTTA CATGAAGTTTGAAGACCTTACAAGTGCTTTGCGGATTGCTCTGCTCCTTGACAACAAGTC AATGCAGTATGTGAAGCAGGTCTACACCGCAACTGAGGATCTTCAGCTCAAAAAGCAGTT CTCATTCATCATTGCACGCCATGGTTTGGCCATGGAGATTGACGACGAGATAGCTGCCGA TGGCAATGATAAGGAGGGTTTGCAAGAAATCGTTAATAATAGTAAGCTGAGTGAGGGGTA CCTCACCCTTGCTCGAGATATCGAAGTGATGGAAGCAAAATCTCCAGAGGATATATATAA GGTCCATTTAATTGATGGGCGTGGTGCCAGCTCCAGTCTTGATTCTGCAAGACAAAATTT AGCTGCAACATTTGTAAATGCATTCGTAAATGCTGGATTTGGTCAGGATAAGTTGATGAC TGCTCCATCTGATTCTTCCAGTAGCGGAGCTTCTGGAAACTGGTTATTCAAGAACAAGGA ACATGGGAAAGCCAGCGCAGCAGCTAGCCTGGGAATGATTCTCTTGTGGGATACTGATTC TGGACTTGCTCAGCTTGACAAGTACTTACATAGTAATGATGCTCATGTTGTTGCTGGAGC TTTGCTAGGTATTGGTATTGTCACATGTGGTGTGAAGAATGATTGTGATCCAGCACTTGC TATTCTCATGGAGTACATTAACAAGGATGACACAAACATTCGGATTGGGGCAATCTTGGG TCTTGGTATTGCATATGCGGGTTCTCAGAAAGAGGAGCTTAAATCTTATCTATCAACTGT GTTGGGGGACTCTGAGAAATCAACTCTTGAGGTCCTGATATTCTCCGCCATCGCTCTGGG ATTGGTGTTTGTTGGTTCTTGCAATGAAGAGATTGCTCAATCTATCATATTTGCCTTGAT GGAGCGCAGTGAGGCTGAGCTGGCAGAACCCATTATACGCCTGCTTCCTGTTGCGCTTGG TCTTCTGTATCTTGGAAAGCAGGAGAGTGTAGAGGCTACGGCAGAAGTTTCTAAAACATT TGATGAGAAGATAAGAAAGTACTGTGATGTAACACTTATGTCACTAGCATATGCTGGAAC AGGAAATGTGCTCAAGGTTCAAAAGCTCCTTGGGATTTGCTCACAGCATCTTGAGAAAGG TGAAACCCACCAGGGGCCAGCTGTCCTAGGAATTGCGCTTATTGCAATGGCTGAAGAATT AGGAGCTGAGATGGCTGTACGGTCACTTGAGCGTCTTTTACAGTATGGCGAGCAGAATAT TAGACGGGCAGTTCCTCTTGCTCTTGGCATACTCTGCATATCTAATCCGAAGGTAAATGT TATGGACACGCTTAGCAGACTGAGTCATGATGCGGATGCTGATGTGTCAATGGCTGCAAT CATTTCATTGGGTTTCATTGGTGCTGGTACAAACAATGCTAGAATAGCTGGTATGCTTCG CAATCTTTCAAGTTACTATTACAAAGAAGCTGCGCATCTGTTTTGTGTAAGAATTGCTCA AGGACTTGTTCACCTTGGGAAGGGTTTGTTGACTCTCTCTCCATACCATTCTGACCGGTT TCTACTTTCCCCAATGGCCCTTGGAGGCCTTGTTACTGTATTGCATGCTTGCCTCGATAT GAAATCCACCATTCTAGGGAAATACCACTACATTCTTTACATTATCGTCTTGGCGATGCA GCCTAGAATGCTTTTAACGGTGGATGAGGATCTAAAGCCCCTATCTGTTCCAGTACGGGT TGGGCAAGCTGTTGATGTGGTTGGTCAGGCTGGAAGGCCCAAGACAATTACTGGTTTCCA AACACATTCGACACCCGTATTGCTTGCAGCAGGGGAACGGGCTGAATTAGCAACCGAAAA ATACATTCCGCTGACTTCGGTATTGGAGGGCTTTGTAATTCTGAAGAAGAACCCGGAATA TAACGAGGAGTGAGGGACATTTCCAGGCTTGATACAATGCTGATTTCTGGGGCTCACAGG CGTGGCATACTAGGGAACCATGCTGCAACATGGGACAGGATCTTTGCCTATTGGGTTCCC TCCTCGGCGCCTCCTGGTGTTAATCGGATAGGTCTTTTATCTCTTCTACCGGAGTCTCGA GTGTTGGAGCAGAGCTCTTTGAATTCTGAAATCCTTTTTGGTTGTGCAATGACTGACGTG ACGTATCACTTGTACCCAAACATGGGCATCTAGGAGTTGAACTGTTTCCTTTTACCTCCA GTTTATTTATCTGTATGTAGCAAAGTATGTACTGGAAATTTGAGGTCGAAGTATTATTCT TGATTTCCACAAGATCTCATCAAGGAAGCTGACATATTGGTTTCATGCT