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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0143400-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:2408927:2409319:-1 gene:Os02g0143400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SMALL AUXIN-UP RNA 5 description:Similar to small auxin up RNA1. (Os02t0143400-00)
Sequence

ATGGGAGAGCAAGGAGGCAGGGCAAGCAGCAACAAGATCAGGGACATTGTGAGGCTGCAC
CAGCTTCTCAAGAGGTGGAAGAGGGCTGCACTTGCACCAAAGGCCGGCAAGAACAACAAT
GGCGGCGGTGCATCGGTCCCGAAAGGGTTCTTCGCGGTGTGCGTCGGGGAGGAGATGAGG
AGGTTTGTCATCCCCACAGAGTATCTTGGCCACTGGGCATTTGAGCAGCTACTCAGGAAG
GCAGAGGAGGAGTTTGGGTTCCAGCATGAGGGAGCTCTGAGGATTCCATGTGATGTTGAG
GTGTTTGAGGGTATCTTGAGGCTGGTTGGCAGGAAGGATGAGAAGGCAGCAATGTGCTAC
TCTTCTTCAGAGCATGAGATCTTGTGCAGATGA

Peptide Sequence

PEP ID

Os02t0143400-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:2408927:2409319:-1 gene:Os02g0143400 transcript:Os02t0143400-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SMALL AUXIN-UP RNA 5 description:Similar to small auxin up RNA1. (Os02t0143400-00)
Sequence

MGEQGGRASSNKIRDIVRLHQLLKRWKRAALAPKAGKNNNGGGASVPKGFFAVCVGEEMR
RFVIPTEYLGHWAFEQLLRKAEEEFGFQHEGALRIPCDVEVFEGILRLVGRKDEKAAMCY
SSSEHEILCR

Transcript Sequence

Transcript ID

Os02t0143400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:2408927:2409319:-1 gene:Os02g0143400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SMALL AUXIN-UP RNA 5 description:Similar to small auxin up RNA1. (Os02t0143400-00)
Sequence

ATGGGAGAGCAAGGAGGCAGGGCAAGCAGCAACAAGATCAGGGACATTGTGAGGCTGCAC
CAGCTTCTCAAGAGGTGGAAGAGGGCTGCACTTGCACCAAAGGCCGGCAAGAACAACAAT
GGCGGCGGTGCATCGGTCCCGAAAGGGTTCTTCGCGGTGTGCGTCGGGGAGGAGATGAGG
AGGTTTGTCATCCCCACAGAGTATCTTGGCCACTGGGCATTTGAGCAGCTACTCAGGAAG
GCAGAGGAGGAGTTTGGGTTCCAGCATGAGGGAGCTCTGAGGATTCCATGTGATGTTGAG
GTGTTTGAGGGTATCTTGAGGCTGGTTGGCAGGAAGGATGAGAAGGCAGCAATGTGCTAC
TCTTCTTCAGAGCATGAGATCTTGTGCAGATGA