Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0139700-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:2128429:2137095:-1 gene:Os02g0139700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:oxidosqualene cyclase 2, cycloartenol synthase 1 description:Similar to Cycloartenol synthase. (Os02t0139700-01)
Sequence	ATGTGGCGGCTGAGGGTGGCGGAGGGCGGGGGGGACCCGTGGCTGCGCACGAAGAACGGC CACGTGGGGCGCCAGGTCTGGGAGTTCGACCCCGCCGCGGGCGACCCCGACGAGCTCGCC GCCGTCGAGGCCGCCCGCCGCGGTTTCGCCGCCCGCCGCCACGAGCTCAAGCACAGCTCC GACCTCCTCATGCGCATGCAGTTTGCTAAAGCAAATCCTCTTAAGCTGGACATTCCAGCT ATCAAGCTAGAGGAGCATGAAGCTGTTACAGGCGAAGCTGTATTATCCTCTCTAAAAAGG GCAATTGCTCGTTATTCTACTTTTCAAGCACATGATGGACACTGGCCTGGGGATTATGGT GGTCCCATGTTCCTTATGCCAGGCTTGATTATAACATTATATGTGAGCGGAGCGCTGAAC ACTGCTTTGTCATCTGAACATCAGAAGGAGATACGGCGGTATCTCTACAATCATCAGAAT GAAGATGGAGGATGGGGTTTGCACATTGAGGGCCACAGCACCATGTTTGGCTCAGCGTTG ACATATGTTTCTTTGAGATTGCTTGGGGAGGGGCCAGATAGCGGCGATGGAGCTATGGAG AAAGGACGAAAATGGATTTTAGACCATGGGGGAGCAACTTATATTACATCATGGGGCAAG TTTTGGCTTTCGGTGCTTGGTGTATTTGACTGGTCTGGCAACAACCCAGTGCCACCAGAA ATATGGTTGTTGCCATATTTCCTGCCGATTCATCCAGGGCGAATGTGGTGTCATTGCCGG ATGGTTTATTTGCCTATGTGTTACATTTATGGAAAGAGGTTTGTGGGCCCAGTTACACCA ATTATATTGGAATTAAGAAAGGAACTCTACGAAGTACCCTACAATGAAGTTGATTGGGAC AAGGCTCGCAATCTATGTGCTAAGGAAGATCTGTACTATCCACATCCATTCGTGCAGGAT GTATTATGGGCCACTCTCCACAAATTTGTTGAACCAGCTATGTTGCGTTGGCCTGGGAAC AAATTGAGGGAGAAAGCTTTGGACACTGTCATGCAGCATATTCATTATGAAGATGAGAAC ACCCGATATATTTGCATTGGTCCAGTAAACAAGGTATTAAATATGCTTGCTTGCTGGATT GAAGATCCAAACTCAGAGGCATTCAAACTCCACATTCCAAGAGTCCACGATTACCTATGG ATTGCAGAAGATGGCATGAAAATGCAGGGTTATAATGGAAGCCAGCTGTGGGACACAGCT TTCACAGTTCAAGCTATAGTGGCTACTGGCCTCATTGAAGAATTTGGTCCTACTCTTAAA CTAGCACATGGCTACATAAAGAAAACGCAGGTTATCGATGACTGCCCTGGAGATCTTAGT CAGTGGTACCGCCACATATCTAAAGGTGCATGGCCCTTTTCTACTGCTGATCATGGTTGG CCTATATCAGATTGCACTGCAGAAGGACTTAAGGCGGCATTATTGCTATCGAAGATTTCT CCAGATATTGTTGGCGAAGCAGTGGAAGTTAATAGACTGTATGATTCTGTCAATTGTTTG ATGTCATACATGAATGATAATGGTGGATTTGCAACATATGAACTCACAAGGTCTTATGCC TGGCTGGAGCTTATCAATCCTGCTGAGACCTTTGGGGACATTGTGATTGATTATCCTTAT GTGGAATGCACTTCAGCAGCAATTCAGGCCCTGACAGCATTTAAAAAGCTCTACCCTGGA CACCGCAAGAGTGAAATAGACAACTGTATAAGCAAAGCTGCTAGCTTTATTGAGGGTATT CAAAAAAGCGATGGTTCATGGTATGGTTCTTGGGCTGTTTGTTTTACCTATGGCACATGG TTTGGTGTAAAGGGATTAGTTGCTGCTGGTAGGACATTCAAAAACAGTCCTGCAATCAGA AAGGCATGTGACTTTTTGTTGTCAAAAGAGCTTCCTTCTGGAGGCTGGGGAGAAAGCTAT TTGTCATCCCAAGATCAGGTTTATACCAATCTCGAAGGGAAGCGACCTCATGCGGTGAAC ACTGGTTGGGCCATGCTAGCCCTAATCGATGCAGGGCAGGCTGAGAGAGATCCAATTCCT TTGCATCGAGCAGCGAAGGTTTTGATCAACTTACAATCGGAAGATGGTGAATTTCCCCAG CAAGAGATCATTGGAGTCTTCAACAAAAACTGCATGATCAGCTACTCCGAGTATAGAAAC ATCTTCCCTATTTGGGCCCTTGGGGAGTACCGTCGCCGCGTCTTGGCCGCAGACAAGTAG

Peptide Sequence

PEP ID	Os02t0139700-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:2128429:2137095:-1 gene:Os02g0139700 transcript:Os02t0139700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:oxidosqualene cyclase 2, cycloartenol synthase 1 description:Similar to Cycloartenol synthase. (Os02t0139700-01)
Sequence	MWRLRVAEGGGDPWLRTKNGHVGRQVWEFDPAAGDPDELAAVEAARRGFAARRHELKHSS DLLMRMQFAKANPLKLDIPAIKLEEHEAVTGEAVLSSLKRAIARYSTFQAHDGHWPGDYG GPMFLMPGLIITLYVSGALNTALSSEHQKEIRRYLYNHQNEDGGWGLHIEGHSTMFGSAL TYVSLRLLGEGPDSGDGAMEKGRKWILDHGGATYITSWGKFWLSVLGVFDWSGNNPVPPE IWLLPYFLPIHPGRMWCHCRMVYLPMCYIYGKRFVGPVTPIILELRKELYEVPYNEVDWD KARNLCAKEDLYYPHPFVQDVLWATLHKFVEPAMLRWPGNKLREKALDTVMQHIHYEDEN TRYICIGPVNKVLNMLACWIEDPNSEAFKLHIPRVHDYLWIAEDGMKMQGYNGSQLWDTA FTVQAIVATGLIEEFGPTLKLAHGYIKKTQVIDDCPGDLSQWYRHISKGAWPFSTADHGW PISDCTAEGLKAALLLSKISPDIVGEAVEVNRLYDSVNCLMSYMNDNGGFATYELTRSYA WLELINPAETFGDIVIDYPYVECTSAAIQALTAFKKLYPGHRKSEIDNCISKAASFIEGI QKSDGSWYGSWAVCFTYGTWFGVKGLVAAGRTFKNSPAIRKACDFLLSKELPSGGWGESY LSSQDQVYTNLEGKRPHAVNTGWAMLALIDAGQAERDPIPLHRAAKVLINLQSEDGEFPQ QEIIGVFNKNCMISYSEYRNIFPIWALGEYRRRVLAADK

Transcript Sequence

Transcript ID	Os02t0139700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:2128429:2137095:-1 gene:Os02g0139700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:oxidosqualene cyclase 2, cycloartenol synthase 1 description:Similar to Cycloartenol synthase. (Os02t0139700-01)
Sequence	AACGCGGCGGTATCTCGTGCTCGTGCGCCGCCCCGCGCTCCCGATCGATTCGCTCTCTCG CCGCCGCCGCCGCAGCTGACGCCGTCGATTTGGTTGGTTGGTTGATCGGCGGCGAGGAGG GGGAGGGGGGGGGGGAGGATGTGGCGGCTGAGGGTGGCGGAGGGCGGGGGGGACCCGTGG CTGCGCACGAAGAACGGCCACGTGGGGCGCCAGGTCTGGGAGTTCGACCCCGCCGCGGGC GACCCCGACGAGCTCGCCGCCGTCGAGGCCGCCCGCCGCGGTTTCGCCGCCCGCCGCCAC GAGCTCAAGCACAGCTCCGACCTCCTCATGCGCATGCAGTTTGCTAAAGCAAATCCTCTT AAGCTGGACATTCCAGCTATCAAGCTAGAGGAGCATGAAGCTGTTACAGGCGAAGCTGTA TTATCCTCTCTAAAAAGGGCAATTGCTCGTTATTCTACTTTTCAAGCACATGATGGACAC TGGCCTGGGGATTATGGTGGTCCCATGTTCCTTATGCCAGGCTTGATTATAACATTATAT GTGAGCGGAGCGCTGAACACTGCTTTGTCATCTGAACATCAGAAGGAGATACGGCGGTAT CTCTACAATCATCAGAATGAAGATGGAGGATGGGGTTTGCACATTGAGGGCCACAGCACC ATGTTTGGCTCAGCGTTGACATATGTTTCTTTGAGATTGCTTGGGGAGGGGCCAGATAGC GGCGATGGAGCTATGGAGAAAGGACGAAAATGGATTTTAGACCATGGGGGAGCAACTTAT ATTACATCATGGGGCAAGTTTTGGCTTTCGGTGCTTGGTGTATTTGACTGGTCTGGCAAC AACCCAGTGCCACCAGAAATATGGTTGTTGCCATATTTCCTGCCGATTCATCCAGGGCGA ATGTGGTGTCATTGCCGGATGGTTTATTTGCCTATGTGTTACATTTATGGAAAGAGGTTT GTGGGCCCAGTTACACCAATTATATTGGAATTAAGAAAGGAACTCTACGAAGTACCCTAC AATGAAGTTGATTGGGACAAGGCTCGCAATCTATGTGCTAAGGAAGATCTGTACTATCCA CATCCATTCGTGCAGGATGTATTATGGGCCACTCTCCACAAATTTGTTGAACCAGCTATG TTGCGTTGGCCTGGGAACAAATTGAGGGAGAAAGCTTTGGACACTGTCATGCAGCATATT CATTATGAAGATGAGAACACCCGATATATTTGCATTGGTCCAGTAAACAAGGTATTAAAT ATGCTTGCTTGCTGGATTGAAGATCCAAACTCAGAGGCATTCAAACTCCACATTCCAAGA GTCCACGATTACCTATGGATTGCAGAAGATGGCATGAAAATGCAGGGTTATAATGGAAGC CAGCTGTGGGACACAGCTTTCACAGTTCAAGCTATAGTGGCTACTGGCCTCATTGAAGAA TTTGGTCCTACTCTTAAACTAGCACATGGCTACATAAAGAAAACGCAGGTTATCGATGAC TGCCCTGGAGATCTTAGTCAGTGGTACCGCCACATATCTAAAGGTGCATGGCCCTTTTCT ACTGCTGATCATGGTTGGCCTATATCAGATTGCACTGCAGAAGGACTTAAGGCGGCATTA TTGCTATCGAAGATTTCTCCAGATATTGTTGGCGAAGCAGTGGAAGTTAATAGACTGTAT GATTCTGTCAATTGTTTGATGTCATACATGAATGATAATGGTGGATTTGCAACATATGAA CTCACAAGGTCTTATGCCTGGCTGGAGCTTATCAATCCTGCTGAGACCTTTGGGGACATT GTGATTGATTATCCTTATGTGGAATGCACTTCAGCAGCAATTCAGGCCCTGACAGCATTT AAAAAGCTCTACCCTGGACACCGCAAGAGTGAAATAGACAACTGTATAAGCAAAGCTGCT AGCTTTATTGAGGGTATTCAAAAAAGCGATGGTTCATGGTATGGTTCTTGGGCTGTTTGT TTTACCTATGGCACATGGTTTGGTGTAAAGGGATTAGTTGCTGCTGGTAGGACATTCAAA AACAGTCCTGCAATCAGAAAGGCATGTGACTTTTTGTTGTCAAAAGAGCTTCCTTCTGGA GGCTGGGGAGAAAGCTATTTGTCATCCCAAGATCAGGTTTATACCAATCTCGAAGGGAAG CGACCTCATGCGGTGAACACTGGTTGGGCCATGCTAGCCCTAATCGATGCAGGGCAGGCT GAGAGAGATCCAATTCCTTTGCATCGAGCAGCGAAGGTTTTGATCAACTTACAATCGGAA GATGGTGAATTTCCCCAGCAAGAGATCATTGGAGTCTTCAACAAAAACTGCATGATCAGC TACTCCGAGTATAGAAACATCTTCCCTATTTGGGCCCTTGGGGAGTACCGTCGCCGCGTC TTGGCCGCAGACAAGTAGTTCAGCACGAGCAGAGCAGCAGCACCAACAATGTGCATGTAT TTATACGTGAAATAATGTAGCTATGTTTCAGTTGTAATAATGTGGCTATATGTATTCTCC CGTTAGTGATGCCACGCGAGCGTAGTCAAATAGAAACGCATTTTGACACAAGTTCGAGAT GAATGGATTCCTGAATCGAATGTTTGTGTTCAGATAGAATTCTTGCCACGCAAAATACAA ACATGAAAG