Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0139000-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:2075629:2079136:-1 gene:Os02g0139000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHATE STARVATION RESPONSE 3 description:Transcription factor, Regulation of Pi signaling and homeostasis, Tolerance to low-Pi stress (Os02t0139000-01)
Sequence	ATGAGCACACAGAGTGTCATTGCTGTAAAGCAATTCAGTGGCCCTGACAAAATCGCACAA GCATACACTGTTCCACAGCCATCAGCTCATGTGCTCTCCAACGCTAACTATGACTATGAT CTCTGTGGTTCAACAAATAGTACCTCATTATCATGTGCTATCCAATCCTCAAACATTAAG ACCGAATCAATCAGTTCATCTAGCCTGCCAAAGATCCTTCCATTTAGTACTGACTCAAAT GGTGAAAGTTCACTTTCTCGCATGTCGCAAGCCGAGTTTTCGGACCCAATTTTGTCTAGT TCTTCTACATTTTGTACAAGTCTGTACACCTCATCACCGATGAACTCTGGTTCATGCCGA AAAACCGGTTATTTGCCTTTCCTGCCACAACCTCCTAAATGTGAGCAGCAGCAGAATTCA GCTGGGCAATCATCCAGCTCTCTGATGCTCCTTGATGCTGATCTCAGAAATAGTGGTCAT GCTGATGATGAACACACAGATGACCTCAAGGACTTTCTTAACCTCTCTTCAGATTGTAGC TTCCATGGGAAATGCAGTGCCATGGCTTATAATGAGCAGATGGAGTTTCAGTTCTTGTCT GAACAGCTCGGAATTGCGATCTCAAACAATGAGGAGAGTCCTCGGTTAGATGACATATAC GACAGACCACCGCAACTTATGTCTCTTCCAGTGTCATCTTGCTCTGATCAGGAGGATCTG CAGGATGCAAGATCTCCTGCTAAAGTTCAGTTGAGTTCATCTCGGTCTTCATCTGGAACT GCATCATGTAACAAACCAAGACTGAGGTGGACACCGGAGCTCCACGAGCGTTTCGTAGAT GCCGTGAACAAGCTTGAAGGGCCAGAAAAGGCAACTCCCAAGGGTGTTCTGAAGCTTATG AAGGTAGAGGGCTTGACCATCTATCATATAAAGAGCCACTTACAGAAGTATCGGCTTGCG AAGTATCTTCCAGAGACAAAAGAAGACAAGAAGCAAGAAGAAAAGAAAACAAAATCAGTG GCTAATGGAAATGATCATGCAAAAAAGAAGAGTGCTCAAATGGCAGAAGCTCTTCGGATG CAAATGGAGGTCCAGAAACAACTCCATGAACAACTAGAGGTACAAAGGCAATTACAGCTG CGCATAGAGGAACACGCAAGATATTTGCAGAAGATATTGGAAGAACAACAGAAAGCAAGA GAATCCATATCCTCAATGACTAGTACAACAGAAGGAGAATCTCCTGAATTCGCACCGATG GAGAAAACCGAGGACAAAGCAGAAACCTCTTCAGCACCTTTGTCAAAGTGTAGAATTACA GATACTGATGCAGAATGCCATTCAAAAGTTGATAATAAAAAGACAAAGCCTCAGGCTGAT CTTGAAATGGTGCATGACGAATAA

Peptide Sequence

PEP ID	Os02t0139000-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:2075629:2079136:-1 gene:Os02g0139000 transcript:Os02t0139000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHATE STARVATION RESPONSE 3 description:Transcription factor, Regulation of Pi signaling and homeostasis, Tolerance to low-Pi stress (Os02t0139000-01)
Sequence	MSTQSVIAVKQFSGPDKIAQAYTVPQPSAHVLSNANYDYDLCGSTNSTSLSCAIQSSNIK TESISSSSLPKILPFSTDSNGESSLSRMSQAEFSDPILSSSSTFCTSLYTSSPMNSGSCR KTGYLPFLPQPPKCEQQQNSAGQSSSSLMLLDADLRNSGHADDEHTDDLKDFLNLSSDCS FHGKCSAMAYNEQMEFQFLSEQLGIAISNNEESPRLDDIYDRPPQLMSLPVSSCSDQEDL QDARSPAKVQLSSSRSSSGTASCNKPRLRWTPELHERFVDAVNKLEGPEKATPKGVLKLM KVEGLTIYHIKSHLQKYRLAKYLPETKEDKKQEEKKTKSVANGNDHAKKKSAQMAEALRM QMEVQKQLHEQLEVQRQLQLRIEEHARYLQKILEEQQKARESISSMTSTTEGESPEFAPM EKTEDKAETSSAPLSKCRITDTDAECHSKVDNKKTKPQADLEMVHDE

Transcript Sequence

Transcript ID	Os02t0139000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:2075629:2079136:-1 gene:Os02g0139000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHATE STARVATION RESPONSE 3 description:Transcription factor, Regulation of Pi signaling and homeostasis, Tolerance to low-Pi stress (Os02t0139000-01)
Sequence	CAGAAATGACTAATCATTTGCAGGCAGGAGTAATTTAGAGAGAGAGAGAGAGGGAGCGAG AGAGGACAGTTTGGATAGGAGAAGAGAGGAGAGAGGGTGCTTGCTGTGGAAGGAGAGGAC TGACAGGCTTGGAGCAAGCATTCCATCTCAGTTCTCATATTAGGTGTGAATGACCAAGAA ATCAACAATCTCAAGGAGCCATGAGCACACAGAGTGTCATTGCTGTAAAGCAATTCAGTG GCCCTGACAAAATCGCACAAGCATACACTGTTCCACAGCCATCAGCTCATGTGCTCTCCA ACGCTAACTATGACTATGATCTCTGTGGTTCAACAAATAGTACCTCATTATCATGTGCTA TCCAATCCTCAAACATTAAGACCGAATCAATCAGTTCATCTAGCCTGCCAAAGATCCTTC CATTTAGTACTGACTCAAATGGTGAAAGTTCACTTTCTCGCATGTCGCAAGCCGAGTTTT CGGACCCAATTTTGTCTAGTTCTTCTACATTTTGTACAAGTCTGTACACCTCATCACCGA TGAACTCTGGTTCATGCCGAAAAACCGGTTATTTGCCTTTCCTGCCACAACCTCCTAAAT GTGAGCAGCAGCAGAATTCAGCTGGGCAATCATCCAGCTCTCTGATGCTCCTTGATGCTG ATCTCAGAAATAGTGGTCATGCTGATGATGAACACACAGATGACCTCAAGGACTTTCTTA ACCTCTCTTCAGATTGTAGCTTCCATGGGAAATGCAGTGCCATGGCTTATAATGAGCAGA TGGAGTTTCAGTTCTTGTCTGAACAGCTCGGAATTGCGATCTCAAACAATGAGGAGAGTC CTCGGTTAGATGACATATACGACAGACCACCGCAACTTATGTCTCTTCCAGTGTCATCTT GCTCTGATCAGGAGGATCTGCAGGATGCAAGATCTCCTGCTAAAGTTCAGTTGAGTTCAT CTCGGTCTTCATCTGGAACTGCATCATGTAACAAACCAAGACTGAGGTGGACACCGGAGC TCCACGAGCGTTTCGTAGATGCCGTGAACAAGCTTGAAGGGCCAGAAAAGGCAACTCCCA AGGGTGTTCTGAAGCTTATGAAGGTAGAGGGCTTGACCATCTATCATATAAAGAGCCACT TACAGAAGTATCGGCTTGCGAAGTATCTTCCAGAGACAAAAGAAGACAAGAAGCAAGAAG AAAAGAAAACAAAATCAGTGGCTAATGGAAATGATCATGCAAAAAAGAAGAGTGCTCAAA TGGCAGAAGCTCTTCGGATGCAAATGGAGGTCCAGAAACAACTCCATGAACAACTAGAGG TACAAAGGCAATTACAGCTGCGCATAGAGGAACACGCAAGATATTTGCAGAAGATATTGG AAGAACAACAGAAAGCAAGAGAATCCATATCCTCAATGACTAGTACAACAGAAGGAGAAT CTCCTGAATTCGCACCGATGGAGAAAACCGAGGACAAAGCAGAAACCTCTTCAGCACCTT TGTCAAAGTGTAGAATTACAGATACTGATGCAGAATGCCATTCAAAAGTTGATAATAAAA AGACAAAGCCTCAGGCTGATCTTGAAATGGTGCATGACGAATAATCATGGTCGCAACCTT TTACAATATAGTGCTTGGACTTGTATGTTTGTTTTATTCTGATGTGCCTCCATGAGTTAG TGCAGAAATTGGTCTTTGCGATTTTATGGTATACTTTTTTGAAGACTTTTTTTTTGTATA TATTACTAACTCAGATGAAAATGGAGCCAGTAAAGAGATGGTGCCATTGGTTCCCTGTAT ACTTTATTTCACTCTGTAAATCTGATTACCATAATATGAATACTTATCCCAAATTT