Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0135700-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:1882715:1888893:1 gene:Os02g0135700 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA polymerase V family protein. (Os02t0135700-01);Hypothetical conserved gene. (Os02t0135700-02)
Sequence	ATGGCCGGGAAGAAGAGGCCGCCGACCGCGCTCTCCGAGCCCGAAGCCGCCGCCGCCGCC GAGGAGGAGGAGGCCGCAGCCAAGACGGCCCCGGCTGCGGAGGCGCCAGCGAAGAAGAAG AAGCTGGCCATGGAGCGGAAGAAGCAGCGGAAGGAGATTGACAAGGAGAGGCACCGCCAG TCCGCTGAATCGGACGCCGCTGCCGCTAAGCCGAAGCAGCCGGCGGAGGTGGCGCCGGAG GCTGCGGCTGCGGCTGCGGCGGCGCCCGTGGCTCCTCCGCCTGTGATTCCGGTGGTGTCG GGGCCTGGGCTTCACATGAACGTGTTCAGGGACCTGGCTTCGCCTGAGGCGTCGCAGAGG GAGGCCGCGGCGGAGGCGCTCGTGGCGGAGCTCAGGCAGGTGCAGGTGGCGCACGAGAAG GGTGGGCGGAAGGAGGGGGAGAGCGAAGCGGAGGGTGGAGATGGGTCGTCGAGGATGGAG GCCGAGAAGGACGATGGCCTGGAGAACTGCGCGCCGTCGGTGCGTTACGCCATTCGGCGG CTCATTCGCGGTATCTCTTCTTCTAGAGAGTTTGCAAGGCAAGGATTCGCATTGGGTCTT GCAGTTGTGCTCGAATCAATTCATGCAATCAGCGTCGAAGCAATCATGAAGTTGATACCT AATTTGTTAGAGTATTCAGCTTCAATGAGGGGACCGGAAGCTAAGGACAATCTTTTGGGA CGATTATTTGGTTATGGATCAATTGTTAGGTCTGGACGGGTCTCGGGACAGTGGGCACAT GAAGAAGGTTCTCCCATTGTCAAGGATTTTGTGGATGAGGTTATCAAACTTGGTAGCAAG AAACGATATTTAACTGAGCCCGCTGTTGCCGTTATCCTGGATTTAGCTGGAAAGCTGCCA GAGGAAGCTATAATATCTGAGATTCTGGAAGCTCCCAGTGTGCAAGATTGGTTCAACAGA GCTGCTGATGCTGGAGATCCGGATGCACTCTATCTGGCTTTGAAGTTGCAAGAGAAAACA AATGCCCAGGAGATATTTGGGAAGCTTCTGCCATATCCATTCAGTCCAGAGGGTTTTTTT GCAGAAGAACATCTTCTTTCAATTGCTGCTTGTTTCAAGGAATCCACATTTTGTCTTCCA CGCATTCATAGTTTGTGGCTTGTTATCACGGACATGCTTGTTCGAGAGGCAGCTTCACAG AGTGATATTGCCACAAGCTCAAGCAAGAAGCACAAAAAGAATAAGAAAGGCAGCTCCTCT GAGGATACAAAAAAGAATCTACATACTTTCTGTGAGGTTATAATTGAAGGAACATTGCTG CTATCATCTCATGATAGGAAGCATTTGGCATTTAATATTCTTCTTAATCTCCTTCCAAGG CTATCCCCATCTTCGATTCAAGTAATTCTGTCCAGCAAGGTTGTTCATGGTTTGATGGAT GTTCTGTCAAATGAATCGTCATGGTTGCACAATGCCGGCCAACATTTTCTGAAGGAGTTA GTAAGTTTAGTGAGTGATGATAATGATCGACGTGTTGCTGTTATTACTAACTTGCAGAAG TATACTGGTGGAAGATTTGACTGCATGACAAAAACGAGAACTGTTAAAGATTTGGTTGCC AAGTTCCGAAGTGGTCAAGATTGTTTGTGTCTTGTGCAGAGTTTGATGTCACTCTTTGTA GATGAAAGCTCTGTTACAGACGAACCATCTGATCAAAGTCAGACAACTGATGAGAATTCG GAAGTTGGTTCAATGGAAGATAAGGACCTTTTTGGCCAAGGGAGTGCTGACCTTTTGAAA AGTTGGATAGTGACTACAATTCCTTGTGTTTTAAAAAATCTGAAGCTGACATCTAAAGGG AATTCACTGACAGATTCTGAAATGGTTAAGTGCATTGAAGAAAAATTTCTAGTGCAGACT GAGGTATTGAAATTCCTTGCAGTTCAAGGTCTTTTTTCAGCGTCTTTGGGATATGAGGTG ACATCATTTGAGCTGCACGAGAAGTTCAAATGGCCAAAGCCAGCTATATCAACATCAATA CGCAATGAATGCATTGAACAACTTCAATTCTTAATAGAAGATGCACAAAAGGATGAAGCT TTACACGTTAGTGAGGTTAAGTCTAATGACCTGGGCTTCTACTTCATGCGCTTCATTAAC ACCCTTTGCAACATTCCCTCAGTTTCACTCTTCCGGACCTTGAGCAGCAACGACGACAAT GCATTCAAGAAGTTACTGGATGTAGAATCTCTGCTTTTCTATGAGGAAAGAAAAGTTGGC CCTGGCTTGGATTCGACTAAAATGCATGCGATGCGTTATCTCCTTATTCAGTTGCTCCTC CAAGTTCTTCTCCATCCAGATGAGTACTGGGAGGCAGCAATTGATGTGACTATATGCTGC AAGAAATCGTTCCCTTCCATCGTTCAGAATGACAAATCCAGTGGACAGCCATCTAATGAG GGTGCGGAGGTGTTTAATGAGGATGGGCCAGGCAAATCTAACAAGGATGGGCCGGAAGAG CATAATGATGATGCGTCAGAGGATTCTAATGAGGACGGGCCACTAGAGTTTATGGATGTA CTTGTCCAGACTTTTCTTTCTGTTTTGCCCCATGTGTCTGGCCCTGTATGTTTCTCCATC GAACAGGTCTTCCGTGTGGTCTGTGATGAAATTACAGAAACAGGGCTTCTTGACATGTTG AGAGTTGTGAAGATAGATTTGAAAGGTTCTCGTCGCCAGTCAGGTAGTGATGATGATGAA GATGATGCATGTGTTGACATTGAAGATGATGATGAAACCATTGTGGAGGACGCGGAGGTT GGGGACACTGATTCTACTGCAGACGGACTGGATGAGGAAATGGATGATGATTCAGCTGAT GAAGTAGATGAAGGTCAAGATGATTTGAAAGAATCAGTTGCCCATGAGTCAAAGGATGGA GATGGTGCAGAAGTTACCAAAGATGGGGATGACTCAGATGATTCAGATGGTATGGATGAT GATGCTATGTTCCGCATTGATCCTTACATTGCGAGGATTTTCAAGGAGCGCAACCTTCCT GGCAGTGAAACTAAGCAATCTCAACTTATGCGGTTCAAGCTCCGTGTCCTTACATTACTT GAGATATATCTTCAGAGGAATACAGGAAATAATCTGGTGCTGGAGGTCTATTCTTTCTTA ATGCAAGCTTTTGTGAAGTCACATAGTGCTGATGGCAGTGAGCAATTCAAGCAACGTATA GGTGGTATATTGCAGAAAAGGATATTCAAAGCCAAGGATTATCCTAAGGGTGATGGTGTA GAGATTAGTACTCTTGAAAGTTTGCTGGAGAAAGCTCTAAAATTGGCATCGCGGTCACGA TACACCACGGTTGCTTCTGTAGCCCAAAATGCTGCATTTTGGCTTCTGAAGATCATCAAT TCAAAGAGTCATTCGAAACAGGAGCTTGCGAGTGTTGTCGAAAAGTTCCAATATATATTG ACCGACTACTTCAACAACAAGAAATCGCGGTTGAAGCTTGGGTTTGTGAAGGAGGCTGTC CGGAGGAATCCTTGGGTAGGAGAGGAGCTCTTTGGATTTGTTCTGCAGAAGATTGGATGC ACAAAAGCTGAATATCGAAGAGTTCAAACGCTAGAATTGGTAGACTGCATACTCAAATCT TGGGCTGGTGATGATTCGAGTGCATCGAAGGTGTTGAAGAAGCACCTTTCTCAGTTGTGC GAGCTGATACAAGAAGTTCTTACAAAGATCCCAGAAAACAAGTCACGTCGTCAAGAAGTC CGGAGATTTTGCACCCGAGTATTGCAGACAGTGACAAAGCTTAACCTCAAAGACCGGTTT CAGAAGAAATTGAATCCTGAAACGCTCTCCCTTTGTGAGGCACAGCTAGGAGCTGCTTTT GTTCGCTTTCAAAAATGA

Peptide Sequence

PEP ID	Os02t0135700-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:1882715:1888893:1 gene:Os02g0135700 transcript:Os02t0135700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA polymerase V family protein. (Os02t0135700-01);Hypothetical conserved gene. (Os02t0135700-02)
Sequence	MAGKKRPPTALSEPEAAAAAEEEEAAAKTAPAAEAPAKKKKLAMERKKQRKEIDKERHRQ SAESDAAAAKPKQPAEVAPEAAAAAAAAPVAPPPVIPVVSGPGLHMNVFRDLASPEASQR EAAAEALVAELRQVQVAHEKGGRKEGESEAEGGDGSSRMEAEKDDGLENCAPSVRYAIRR LIRGISSSREFARQGFALGLAVVLESIHAISVEAIMKLIPNLLEYSASMRGPEAKDNLLG RLFGYGSIVRSGRVSGQWAHEEGSPIVKDFVDEVIKLGSKKRYLTEPAVAVILDLAGKLP EEAIISEILEAPSVQDWFNRAADAGDPDALYLALKLQEKTNAQEIFGKLLPYPFSPEGFF AEEHLLSIAACFKESTFCLPRIHSLWLVITDMLVREAASQSDIATSSSKKHKKNKKGSSS EDTKKNLHTFCEVIIEGTLLLSSHDRKHLAFNILLNLLPRLSPSSIQVILSSKVVHGLMD VLSNESSWLHNAGQHFLKELVSLVSDDNDRRVAVITNLQKYTGGRFDCMTKTRTVKDLVA KFRSGQDCLCLVQSLMSLFVDESSVTDEPSDQSQTTDENSEVGSMEDKDLFGQGSADLLK SWIVTTIPCVLKNLKLTSKGNSLTDSEMVKCIEEKFLVQTEVLKFLAVQGLFSASLGYEV TSFELHEKFKWPKPAISTSIRNECIEQLQFLIEDAQKDEALHVSEVKSNDLGFYFMRFIN TLCNIPSVSLFRTLSSNDDNAFKKLLDVESLLFYEERKVGPGLDSTKMHAMRYLLIQLLL QVLLHPDEYWEAAIDVTICCKKSFPSIVQNDKSSGQPSNEGAEVFNEDGPGKSNKDGPEE HNDDASEDSNEDGPLEFMDVLVQTFLSVLPHVSGPVCFSIEQVFRVVCDEITETGLLDML RVVKIDLKGSRRQSGSDDDEDDACVDIEDDDETIVEDAEVGDTDSTADGLDEEMDDDSAD EVDEGQDDLKESVAHESKDGDGAEVTKDGDDSDDSDGMDDDAMFRIDPYIARIFKERNLP GSETKQSQLMRFKLRVLTLLEIYLQRNTGNNLVLEVYSFLMQAFVKSHSADGSEQFKQRI GGILQKRIFKAKDYPKGDGVEISTLESLLEKALKLASRSRYTTVASVAQNAAFWLLKIIN SKSHSKQELASVVEKFQYILTDYFNNKKSRLKLGFVKEAVRRNPWVGEELFGFVLQKIGC TKAEYRRVQTLELVDCILKSWAGDDSSASKVLKKHLSQLCELIQEVLTKIPENKSRRQEV RRFCTRVLQTVTKLNLKDRFQKKLNPETLSLCEAQLGAAFVRFQK

Transcript Sequence

Transcript ID	Os02t0135700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:1882715:1888893:1 gene:Os02g0135700 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA polymerase V family protein. (Os02t0135700-01);Hypothetical conserved gene. (Os02t0135700-02)
Sequence	GAGGGAGAGGAGAAACCCTAGGCTTGGTTGGCTCCAAGCTTCGCAGCCATCGCCGCCTCG GCATAAACCCTTCTACTCCGCAGCCATCGCCGCCTCGAGCTGAGCTTGAGATTCGCGGGG GGCGCAGCAATGGCCGGGAAGAAGAGGCCGCCGACCGCGCTCTCCGAGCCCGAAGCCGCC GCCGCCGCCGAGGAGGAGGAGGCCGCAGCCAAGACGGCCCCGGCTGCGGAGGCGCCAGCG AAGAAGAAGAAGCTGGCCATGGAGCGGAAGAAGCAGCGGAAGGAGATTGACAAGGAGAGG CACCGCCAGTCCGCTGAATCGGACGCCGCTGCCGCTAAGCCGAAGCAGCCGGCGGAGGTG GCGCCGGAGGCTGCGGCTGCGGCTGCGGCGGCGCCCGTGGCTCCTCCGCCTGTGATTCCG GTGGTGTCGGGGCCTGGGCTTCACATGAACGTGTTCAGGGACCTGGCTTCGCCTGAGGCG TCGCAGAGGGAGGCCGCGGCGGAGGCGCTCGTGGCGGAGCTCAGGCAGGTGCAGGTGGCG CACGAGAAGGGTGGGCGGAAGGAGGGGGAGAGCGAAGCGGAGGGTGGAGATGGGTCGTCG AGGATGGAGGCCGAGAAGGACGATGGCCTGGAGAACTGCGCGCCGTCGGTGCGTTACGCC ATTCGGCGGCTCATTCGCGGTATCTCTTCTTCTAGAGAGTTTGCAAGGCAAGGATTCGCA TTGGGTCTTGCAGTTGTGCTCGAATCAATTCATGCAATCAGCGTCGAAGCAATCATGAAG TTGATACCTAATTTGTTAGAGTATTCAGCTTCAATGAGGGGACCGGAAGCTAAGGACAAT CTTTTGGGACGATTATTTGGTTATGGATCAATTGTTAGGTCTGGACGGGTCTCGGGACAG TGGGCACATGAAGAAGGTTCTCCCATTGTCAAGGATTTTGTGGATGAGGTTATCAAACTT GGTAGCAAGAAACGATATTTAACTGAGCCCGCTGTTGCCGTTATCCTGGATTTAGCTGGA AAGCTGCCAGAGGAAGCTATAATATCTGAGATTCTGGAAGCTCCCAGTGTGCAAGATTGG TTCAACAGAGCTGCTGATGCTGGAGATCCGGATGCACTCTATCTGGCTTTGAAGTTGCAA GAGAAAACAAATGCCCAGGAGATATTTGGGAAGCTTCTGCCATATCCATTCAGTCCAGAG GGTTTTTTTGCAGAAGAACATCTTCTTTCAATTGCTGCTTGTTTCAAGGAATCCACATTT TGTCTTCCACGCATTCATAGTTTGTGGCTTGTTATCACGGACATGCTTGTTCGAGAGGCA GCTTCACAGAGTGATATTGCCACAAGCTCAAGCAAGAAGCACAAAAAGAATAAGAAAGGC AGCTCCTCTGAGGATACAAAAAAGAATCTACATACTTTCTGTGAGGTTATAATTGAAGGA ACATTGCTGCTATCATCTCATGATAGGAAGCATTTGGCATTTAATATTCTTCTTAATCTC CTTCCAAGGCTATCCCCATCTTCGATTCAAGTAATTCTGTCCAGCAAGGTTGTTCATGGT TTGATGGATGTTCTGTCAAATGAATCGTCATGGTTGCACAATGCCGGCCAACATTTTCTG AAGGAGTTAGTAAGTTTAGTGAGTGATGATAATGATCGACGTGTTGCTGTTATTACTAAC TTGCAGAAGTATACTGGTGGAAGATTTGACTGCATGACAAAAACGAGAACTGTTAAAGAT TTGGTTGCCAAGTTCCGAAGTGGTCAAGATTGTTTGTGTCTTGTGCAGAGTTTGATGTCA CTCTTTGTAGATGAAAGCTCTGTTACAGACGAACCATCTGATCAAAGTCAGACAACTGAT GAGAATTCGGAAGTTGGTTCAATGGAAGATAAGGACCTTTTTGGCCAAGGGAGTGCTGAC CTTTTGAAAAGTTGGATAGTGACTACAATTCCTTGTGTTTTAAAAAATCTGAAGCTGACA TCTAAAGGGAATTCACTGACAGATTCTGAAATGGTTAAGTGCATTGAAGAAAAATTTCTA GTGCAGACTGAGGTATTGAAATTCCTTGCAGTTCAAGGTCTTTTTTCAGCGTCTTTGGGA TATGAGGTGACATCATTTGAGCTGCACGAGAAGTTCAAATGGCCAAAGCCAGCTATATCA ACATCAATACGCAATGAATGCATTGAACAACTTCAATTCTTAATAGAAGATGCACAAAAG GATGAAGCTTTACACGTTAGTGAGGTTAAGTCTAATGACCTGGGCTTCTACTTCATGCGC TTCATTAACACCCTTTGCAACATTCCCTCAGTTTCACTCTTCCGGACCTTGAGCAGCAAC GACGACAATGCATTCAAGAAGTTACTGGATGTAGAATCTCTGCTTTTCTATGAGGAAAGA AAAGTTGGCCCTGGCTTGGATTCGACTAAAATGCATGCGATGCGTTATCTCCTTATTCAG TTGCTCCTCCAAGTTCTTCTCCATCCAGATGAGTACTGGGAGGCAGCAATTGATGTGACT ATATGCTGCAAGAAATCGTTCCCTTCCATCGTTCAGAATGACAAATCCAGTGGACAGCCA TCTAATGAGGGTGCGGAGGTGTTTAATGAGGATGGGCCAGGCAAATCTAACAAGGATGGG CCGGAAGAGCATAATGATGATGCGTCAGAGGATTCTAATGAGGACGGGCCACTAGAGTTT ATGGATGTACTTGTCCAGACTTTTCTTTCTGTTTTGCCCCATGTGTCTGGCCCTGTATGT TTCTCCATCGAACAGGTCTTCCGTGTGGTCTGTGATGAAATTACAGAAACAGGGCTTCTT GACATGTTGAGAGTTGTGAAGATAGATTTGAAAGGTTCTCGTCGCCAGTCAGGTAGTGAT GATGATGAAGATGATGCATGTGTTGACATTGAAGATGATGATGAAACCATTGTGGAGGAC GCGGAGGTTGGGGACACTGATTCTACTGCAGACGGACTGGATGAGGAAATGGATGATGAT TCAGCTGATGAAGTAGATGAAGGTCAAGATGATTTGAAAGAATCAGTTGCCCATGAGTCA AAGGATGGAGATGGTGCAGAAGTTACCAAAGATGGGGATGACTCAGATGATTCAGATGGT ATGGATGATGATGCTATGTTCCGCATTGATCCTTACATTGCGAGGATTTTCAAGGAGCGC AACCTTCCTGGCAGTGAAACTAAGCAATCTCAACTTATGCGGTTCAAGCTCCGTGTCCTT ACATTACTTGAGATATATCTTCAGAGGAATACAGGAAATAATCTGGTGCTGGAGGTCTAT TCTTTCTTAATGCAAGCTTTTGTGAAGTCACATAGTGCTGATGGCAGTGAGCAATTCAAG CAACGTATAGGTGGTATATTGCAGAAAAGGATATTCAAAGCCAAGGATTATCCTAAGGGT GATGGTGTAGAGATTAGTACTCTTGAAAGTTTGCTGGAGAAAGCTCTAAAATTGGCATCG CGGTCACGATACACCACGGTTGCTTCTGTAGCCCAAAATGCTGCATTTTGGCTTCTGAAG ATCATCAATTCAAAGAGTCATTCGAAACAGGAGCTTGCGAGTGTTGTCGAAAAGTTCCAA TATATATTGACCGACTACTTCAACAACAAGAAATCGCGGTTGAAGCTTGGGTTTGTGAAG GAGGCTGTCCGGAGGAATCCTTGGGTAGGAGAGGAGCTCTTTGGATTTGTTCTGCAGAAG ATTGGATGCACAAAAGCTGAATATCGAAGAGTTCAAACGCTAGAATTGGTAGACTGCATA CTCAAATCTTGGGCTGGTGATGATTCGAGTGCATCGAAGGTGTTGAAGAAGCACCTTTCT CAGTTGTGCGAGCTGATACAAGAAGTTCTTACAAAGATCCCAGAAAACAAGTCACGTCGT CAAGAAGTCCGGAGATTTTGCACCCGAGTATTGCAGACAGTGACAAAGCTTAACCTCAAA GACCGGTTTCAGAAGAAATTGAATCCTGAAACGCTCTCCCTTTGTGAGGCACAGCTAGGA GCTGCTTTTGTTCGCTTTCAAAAATGACATTACATTTATGAGGAGACTGTATTTGTTCCC TTTCGAAAATGATAGTCACTAGAAATATTTTGAGCTGAGCTAAGTTTTGTTCCTCATTTC AGCTACATGAGTAGATTCTATCAAATTAAGCTGTATCGGTTTTTGTGACAGTATCTGAAA GGAAAAGATATTCACTGTT