Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0135600-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:1879189:1882475:-1 gene:Os02g0135600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0135600-01)
Sequence

ATGGCGGACAAGCCGAGCCGCGGGCTGGTGCTCTACGCCGCGGGGCACGCGGCGCTGCTC
CCTCCGGCGAGCGGCGGCGGCGGCGGAGCCGGAGGAGGAGGGGGAGGGAGCCACCTCGAC
GCCTTCGCGTCTCTCGCGTCATGTGGCTTCCTCTCCCTCCGCTCGCCCCCTCTCGCGAGT
GGGGAGGAGAAGCGTGACAGCACGATTCTTGAGCTCGCGCAGCTGCTCGACGTGTACGAT
GATCTCTTCCCTGCTAAGACTGAGAAAACTGGTCAAGAGACTGCCCAGGTGGATCCACTG
CAACTAGCAGTTCCCAAGCTATCTGAGAGGTTTATGGGGATCAGAGCTGCCATGGTCACC
AATTGCCCCCTTGTTAGTTCTTTTGCAGCAAATCTTGGTTTTCATGTATCCGGGACTGAA
GATTTAGTTGCACAATCTGGATCTTCCGCTGCTTCTAAGGAGGCTGGAATTATTTCCCAG
GCGTTAAGTCTGCTTGGATTTTCAGAGGGGAATGTTCAGGAGACATCTGAATTTGATCTG
GTGTTTCTGCATGTTGCCATGGAGAATACAAACAGCAAGTTGGGAAAATTGGGAATGAAG
ACTGATCTAAATCGGCTTGATAAATTAGTTGGTGCAATCATGGAAGCGGCGCCCATAAGT
TCAGCTATCGCCTCCCGTATTCTTGTATCTGTGATGTTGAGCTATGGGTCTGCTGCTGAA
AATAAGGATGAGTTTTCCATCTCAAAATCTTCGACTGAAATAGATTCTGACTTGAACTTG
CTTCGCCCACGCCAGAGCTATACTATGAAAGCAGGAAATACATTGGATGATGTTAGGAAT
CATCATCCGATTCTGTTAGCACAGTGGCAGGAAGGAGTTACACGCTCTGATTTGACCGAA
GGGTTCTCTTTTGAGGAATTCATAAAGCGTGGTGGAAATCTTGCTATGCTTGCTGAACGC
TTTCTACATGAGGTGGCATTTAAGCTCTGGAAAGCTCCTAAATATGGAGCTTAA

Peptide Sequence

PEP ID

Os02t0135600-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:1879189:1882475:-1 gene:Os02g0135600 transcript:Os02t0135600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0135600-01)
Sequence

MADKPSRGLVLYAAGHAALLPPASGGGGGAGGGGGGSHLDAFASLASCGFLSLRSPPLAS
GEEKRDSTILELAQLLDVYDDLFPAKTEKTGQETAQVDPLQLAVPKLSERFMGIRAAMVT
NCPLVSSFAANLGFHVSGTEDLVAQSGSSAASKEAGIISQALSLLGFSEGNVQETSEFDL
VFLHVAMENTNSKLGKLGMKTDLNRLDKLVGAIMEAAPISSAIASRILVSVMLSYGSAAE
NKDEFSISKSSTEIDSDLNLLRPRQSYTMKAGNTLDDVRNHHPILLAQWQEGVTRSDLTE
GFSFEEFIKRGGNLAMLAERFLHEVAFKLWKAPKYGA

Transcript Sequence

Transcript ID

Os02t0135600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:1879189:1882475:-1 gene:Os02g0135600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0135600-01)
Sequence

GAGGTGCAGCAATGGCGGACAAGCCGAGCCGCGGGCTGGTGCTCTACGCCGCGGGGCACG
CGGCGCTGCTCCCTCCGGCGAGCGGCGGCGGCGGCGGAGCCGGAGGAGGAGGGGGAGGGA
GCCACCTCGACGCCTTCGCGTCTCTCGCGTCATGTGGCTTCCTCTCCCTCCGCTCGCCCC
CTCTCGCGAGTGGGGAGGAGAAGCGTGACAGCACGATTCTTGAGCTCGCGCAGCTGCTCG
ACGTGTACGATGATCTCTTCCCTGCTAAGACTGAGAAAACTGGTCAAGAGACTGCCCAGG
TGGATCCACTGCAACTAGCAGTTCCCAAGCTATCTGAGAGGTTTATGGGGATCAGAGCTG
CCATGGTCACCAATTGCCCCCTTGTTAGTTCTTTTGCAGCAAATCTTGGTTTTCATGTAT
CCGGGACTGAAGATTTAGTTGCACAATCTGGATCTTCCGCTGCTTCTAAGGAGGCTGGAA
TTATTTCCCAGGCGTTAAGTCTGCTTGGATTTTCAGAGGGGAATGTTCAGGAGACATCTG
AATTTGATCTGGTGTTTCTGCATGTTGCCATGGAGAATACAAACAGCAAGTTGGGAAAAT
TGGGAATGAAGACTGATCTAAATCGGCTTGATAAATTAGTTGGTGCAATCATGGAAGCGG
CGCCCATAAGTTCAGCTATCGCCTCCCGTATTCTTGTATCTGTGATGTTGAGCTATGGGT
CTGCTGCTGAAAATAAGGATGAGTTTTCCATCTCAAAATCTTCGACTGAAATAGATTCTG
ACTTGAACTTGCTTCGCCCACGCCAGAGCTATACTATGAAAGCAGGAAATACATTGGATG
ATGTTAGGAATCATCATCCGATTCTGTTAGCACAGTGGCAGGAAGGAGTTACACGCTCTG
ATTTGACCGAAGGGTTCTCTTTTGAGGAATTCATAAAGCGTGGTGGAAATCTTGCTATGC
TTGCTGAACGCTTTCTACATGAGGTGGCATTTAAGCTCTGGAAAGCTCCTAAATATGGAG
CTTAAATCTGCCTGAGAAGATCCTCTCTAAATAAGGCGCGAAAATAATAAAAAGAGAATG
ATCTGTTGGGTTCCTTCTGTAAATGGGAACTGCAGATATTGCAAATAGATGAGTTTTGGA
GGAGACGTACTCTCCCAAGGTTACAGAATTGATAAAGGAGATGCTGATAAACTGAAAACT
AGTACGGTTTTTACTGAATTGATGGGAGATTTGTACTGTGCTTATCCGATGCTTTTGAAC
GGAGGAACTTTCCTGAGCTTATGTGAAACGCCGTTGCTGTTTGTGTAGAATCCATTTACT
TGAAACTTTCTAACTTGGGAGCTGTTTCAGCACTG