Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0133800-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:1784613:1788028:1 gene:Os02g0133800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C2 subunit of the 20S proteasome, 20S proteasome C2 subunit, 20S proteasome alpha6 subunit description:Proteasome subunit alpha type 1 (EC 3.4.25.1) (20S proteasome alpha subunit F) (20S proteasome subunit alpha-6) (Proteasome component C2). (Os02t0133800-01);Non-protein coding transcript. (Os02t0133800-02)
Sequence	ATGTTCCGGAACCAGTACGACACCGACGTGACGACGTGGAGCCCGGCGGGGCGGCTGTTC CAGGTGGAGTACGCCATGGAGGCCGTGAAGCAGGGCTCCGCCTGCGTCGGCCTCCGCTCC CGCACCCACGCCGTCCTCGCCGCCGCGAACAAGGCCGCCTCCGAGCTCTCCTCCCACCAG CGGAAGGTCTTCCGCGTCGCAGACCACGCCGGGGTCGCGCTCGCCGGCCTCACCGCCGAC GGCCGCGTCCTCTCCCGATTCCTCCGCTCCGAGTGCATCAACCACGCCTTCGTCTACGAC GCGCCCCTCCCCGTCTCCAGGCTCGCGCTCCGCCTTGCCGACAAGGCGCAGGTTTGCACA CAGCGATCATGGAAGAGGCCATATGGTGTTGGCCTCCTTGTTGCTGGATTAGATGAGTCT GGAGCCCATCTATACTATAACTGCCCCAGCGGCAACTATTTTGAGTACCAGGCATTTGCT ATTGGCTCTCGCTCTCAAGCCGCCAAGACTTTCCTTGAGCGCAGATTCGAGGGCTACAAC GACTACACCCCAGAGCAACTTATCAAAGATGCCCTCTCCGCCATAAAGGAGACGCTGCAA GGTGAGAAGCTAACCAGCTCCAACTGCACCGTTGCTATTGTTGGCAGAAAGGACGATGGC ACCGTTGAGCCATTTGAGATGATCGACGTGAAGAGGATCCAAGAAATAATCGATTCCATG GAGGCTGCCGAGGAGGCACCAGCGGCAGAGGCTGAGTCGAGCTCGATGCAGGAGGAGGAC AAGGGCACGGACGCCGCGCCCATGGACATCTAG

Peptide Sequence

PEP ID	Os02t0133800-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:1784613:1788028:1 gene:Os02g0133800 transcript:Os02t0133800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C2 subunit of the 20S proteasome, 20S proteasome C2 subunit, 20S proteasome alpha6 subunit description:Proteasome subunit alpha type 1 (EC 3.4.25.1) (20S proteasome alpha subunit F) (20S proteasome subunit alpha-6) (Proteasome component C2). (Os02t0133800-01);Non-protein coding transcript. (Os02t0133800-02)
Sequence	MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSACVGLRSRTHAVLAAANKAASELSSHQ RKVFRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAPLPVSRLALRLADKAQVCT QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFEGYN DYTPEQLIKDALSAIKETLQGEKLTSSNCTVAIVGRKDDGTVEPFEMIDVKRIQEIIDSM EAAEEAPAAEAESSSMQEEDKGTDAAPMDI

Transcript Sequence

Transcript ID	Os02t0133800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:1784613:1788028:1 gene:Os02g0133800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C2 subunit of the 20S proteasome, 20S proteasome C2 subunit, 20S proteasome alpha6 subunit description:Proteasome subunit alpha type 1 (EC 3.4.25.1) (20S proteasome alpha subunit F) (20S proteasome subunit alpha-6) (Proteasome component C2). (Os02t0133800-01);Non-protein coding transcript. (Os02t0133800-02)
Sequence	GCCCAAACCCTACACAATCTTCGAATCCCCACCGAATCGCGCGAGAGAGAAATCCAAGGC GAGGACGAGGAGGAGGAGAAGGAAGCTTCGAGAATGTTCCGGAACCAGTACGACACCGAC GTGACGACGTGGAGCCCGGCGGGGCGGCTGTTCCAGGTGGAGTACGCCATGGAGGCCGTG AAGCAGGGCTCCGCCTGCGTCGGCCTCCGCTCCCGCACCCACGCCGTCCTCGCCGCCGCG AACAAGGCCGCCTCCGAGCTCTCCTCCCACCAGCGGAAGGTCTTCCGCGTCGCAGACCAC GCCGGGGTCGCGCTCGCCGGCCTCACCGCCGACGGCCGCGTCCTCTCCCGATTCCTCCGC TCCGAGTGCATCAACCACGCCTTCGTCTACGACGCGCCCCTCCCCGTCTCCAGGCTCGCG CTCCGCCTTGCCGACAAGGCGCAGGTTTGCACACAGCGATCATGGAAGAGGCCATATGGT GTTGGCCTCCTTGTTGCTGGATTAGATGAGTCTGGAGCCCATCTATACTATAACTGCCCC AGCGGCAACTATTTTGAGTACCAGGCATTTGCTATTGGCTCTCGCTCTCAAGCCGCCAAG ACTTTCCTTGAGCGCAGATTCGAGGGCTACAACGACTACACCCCAGAGCAACTTATCAAA GATGCCCTCTCCGCCATAAAGGAGACGCTGCAAGGTGAGAAGCTAACCAGCTCCAACTGC ACCGTTGCTATTGTTGGCAGAAAGGACGATGGCACCGTTGAGCCATTTGAGATGATCGAC GTGAAGAGGATCCAAGAAATAATCGATTCCATGGAGGCTGCCGAGGAGGCACCAGCGGCA GAGGCTGAGTCGAGCTCGATGCAGGAGGAGGACAAGGGCACGGACGCCGCGCCCATGGAC ATCTAGGCCCAAGATACATCTTATCTCCTCCCTTACACCGTGTCTGAGTTTCCAAAAGAC TACTGTTTTAGAAAGCTGTGACTGTTGTGTACCCTTTCTTCAGTACTACAACTTTGCGAC GGTCTCTTTGATCAACATCGATTGTGTTTTGGACCGATTATTTACATGTGATGCGGAC