Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0133200-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:1748459:1753122:-1 gene:Os02g0133200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Sec14-nodulin domain-containing protein 3, Sec14-nodulin domain protein 3 description:Similar to Phosphatidylinositol transfer-like protein IV. (Os02t0133200-01)
Sequence	ATGTCGTCAGCCGCCGTGATGCCGACGCCGAGCATGAACTCCTCATCCGCCGGCGCAGCG GCCGCGGCGGCGGCGGCAGAGGGAGGTGGCGGCGAGGACGAGCGGCGGGCGCGGGCGCTG TCGTCGTCGTCGTCGTCGCTGCGGCAGCGCGCGATGAGCGCGTCGTCGAAGCTGCTCCGG ACGTCGCTGAGCAGGAGCAGCAAGGGGGCGGCGGCGCGGCAGCGGAGCAGCAAGGTGATG TCGGTGTCGATCGAGGACGTGCGCGACGCGGAGGAGATGAAGTCGGTGGACGCGTTCCGG CAGACGCTGGTGCTGGAGGAGCTCCTCCCGGCGCGCCACGACGACTACCACATGATGCTC CGCTTCCTCCGCGCCCGCAAGTTCGACATCGACAAGAGCAAGCAGATGTGGAGCGACATG CTGCAATGGCGCAAGGAGTTCGGATCTGACACCATCCTCGACGACTTCCAGTTCGAGGAG ATGGACCAGGTGCTCGAGCACTACCCGCAGGGCCACCATGGCGTCGACCGCGACGGCCGC CCCGTCTACATCGAGAAGCTCGGCGCGATCGACACCGCCAAGCTCCTCCAGGTCACCAGC ATGGACCGCTACGTCAAGTACCATGTCCGCGAGTTCGAGCGCGCCTTCGCCGTCAAGTTC CCCGCCTGCTCCATCGCCGCCAAGCGCCATGTCGACCAGAGCACCACCATCCTCGACGTC TCCGGCGTTGGGTACAAGAACTTCAACAAGGCCGCCAGGGATCTCATCGGCCGCCTCCAG AAGGTCGATGGTGACAACTACCCAGAGACTCTGTGCCGGATGTTCATCATCAACGCCGGT CAAGGATTCAGGCTTCTCTGGAACACCGTCAAGTCCTTCCTCGATCCCAAGACCACAGCC AAGATCCATGTCCTAGGCAACAAGTACCAGAGCAAGCTGCTGGAAGTGATTGATCCCAGC GAATTGCCTGAGTTCCTTGGTGGCACTTGCACCTGCGAAGGCGGCTGCATGCGCTCCGAC AAAGGGCCATGGAAAGATCCTGAAATCATAAAGATGGTCCAATGTGGCATGGGAAGATGT GGATTTAATAGCTCGGGTCATACTGAGGCTGATGAGAAGATGATCACTGAGGATGACATA GTGGCAATTCCCAAGAAGCAAGAATCAATTCGCCGTGATTCCGTTGATTCACCCAAGATC CCACGCGAAAAGATTGAACATCCGCAGATGTCACCACTCCATGAGATGTCAACTTCAGAA AGCAAGGCTCCTCCTGGCCAAGAGGGAAGCTCTTCCCGATACGACGATCTGTTCCCCATG CCGGACAAGAACATGGACTTCAACTGGAACGGCGAAGTCAGCGCCGAGAAGCTCGCACTC GCACGAGACATGTACGCGTCGCTGCCGGACGCGTACAAGCACGGCGACGCCGGGGACCGG CAGGTGGTGACGGGGTTCATGGCGTTCGTGATGGGGGTGGTGGCGATGTTCCGGGTGGGG AAGATCGCGCCGAAGCGCGCCATGGACGCGGCGATGGGCATCGCGACGATGGAGGCGATG GCCAAGAACCGGAAGCTGATGCAGCAGCAGCAGCGGCAGCTGGAGCAGCTCCCTGGCCCG GACACGGTGACGGTGTCGACGGCGCAGTACGAAGCGCTGATCAAGCGGCTCGGCGACCTC GAGGAGAAGGTGGCGGCGCTCACCTCCCGCCCTCCCGAGATGCCCGCCGACAAGGAGGAC TTGCTCAAAGCCGCCGTCACCCGCGTCGAGGCCCTCGAGACCGAGCTCGAATCCACCAAG AAGCTTTTGGAGACTTCGTCGGGGCAGCAGGAGGAGGTGCTGGCCTACATCGAGAAGAAG AAGAAGAAGAGGGGGATGCAGAATCCATTCCGCTGGTGA

Peptide Sequence

PEP ID	Os02t0133200-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:1748459:1753122:-1 gene:Os02g0133200 transcript:Os02t0133200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Sec14-nodulin domain-containing protein 3, Sec14-nodulin domain protein 3 description:Similar to Phosphatidylinositol transfer-like protein IV. (Os02t0133200-01)
Sequence	MSSAAVMPTPSMNSSSAGAAAAAAAAEGGGGEDERRARALSSSSSSLRQRAMSASSKLLR TSLSRSSKGAAARQRSSKVMSVSIEDVRDAEEMKSVDAFRQTLVLEELLPARHDDYHMML RFLRARKFDIDKSKQMWSDMLQWRKEFGSDTILDDFQFEEMDQVLEHYPQGHHGVDRDGR PVYIEKLGAIDTAKLLQVTSMDRYVKYHVREFERAFAVKFPACSIAAKRHVDQSTTILDV SGVGYKNFNKAARDLIGRLQKVDGDNYPETLCRMFIINAGQGFRLLWNTVKSFLDPKTTA KIHVLGNKYQSKLLEVIDPSELPEFLGGTCTCEGGCMRSDKGPWKDPEIIKMVQCGMGRC GFNSSGHTEADEKMITEDDIVAIPKKQESIRRDSVDSPKIPREKIEHPQMSPLHEMSTSE SKAPPGQEGSSSRYDDLFPMPDKNMDFNWNGEVSAEKLALARDMYASLPDAYKHGDAGDR QVVTGFMAFVMGVVAMFRVGKIAPKRAMDAAMGIATMEAMAKNRKLMQQQQRQLEQLPGP DTVTVSTAQYEALIKRLGDLEEKVAALTSRPPEMPADKEDLLKAAVTRVEALETELESTK KLLETSSGQQEEVLAYIEKKKKKRGMQNPFRW

Transcript Sequence

Transcript ID	Os02t0133200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:1748459:1753122:-1 gene:Os02g0133200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Sec14-nodulin domain-containing protein 3, Sec14-nodulin domain protein 3 description:Similar to Phosphatidylinositol transfer-like protein IV. (Os02t0133200-01)
Sequence	AGGAGGCCCTCGGGCTCGGCGCGGCGAATAATTTAGGAAATTGATTATTAATAAGGCGAG CGGCGAGCGGCGATGTCGTCAGCCGCCGTGATGCCGACGCCGAGCATGAACTCCTCATCC GCCGGCGCAGCGGCCGCGGCGGCGGCGGCAGAGGGAGGTGGCGGCGAGGACGAGCGGCGG GCGCGGGCGCTGTCGTCGTCGTCGTCGTCGCTGCGGCAGCGCGCGATGAGCGCGTCGTCG AAGCTGCTCCGGACGTCGCTGAGCAGGAGCAGCAAGGGGGCGGCGGCGCGGCAGCGGAGC AGCAAGGTGATGTCGGTGTCGATCGAGGACGTGCGCGACGCGGAGGAGATGAAGTCGGTG GACGCGTTCCGGCAGACGCTGGTGCTGGAGGAGCTCCTCCCGGCGCGCCACGACGACTAC CACATGATGCTCCGCTTCCTCCGCGCCCGCAAGTTCGACATCGACAAGAGCAAGCAGATG TGGAGCGACATGCTGCAATGGCGCAAGGAGTTCGGATCTGACACCATCCTCGACGACTTC CAGTTCGAGGAGATGGACCAGGTGCTCGAGCACTACCCGCAGGGCCACCATGGCGTCGAC CGCGACGGCCGCCCCGTCTACATCGAGAAGCTCGGCGCGATCGACACCGCCAAGCTCCTC CAGGTCACCAGCATGGACCGCTACGTCAAGTACCATGTCCGCGAGTTCGAGCGCGCCTTC GCCGTCAAGTTCCCCGCCTGCTCCATCGCCGCCAAGCGCCATGTCGACCAGAGCACCACC ATCCTCGACGTCTCCGGCGTTGGGTACAAGAACTTCAACAAGGCCGCCAGGGATCTCATC GGCCGCCTCCAGAAGGTCGATGGTGACAACTACCCAGAGACTCTGTGCCGGATGTTCATC ATCAACGCCGGTCAAGGATTCAGGCTTCTCTGGAACACCGTCAAGTCCTTCCTCGATCCC AAGACCACAGCCAAGATCCATGTCCTAGGCAACAAGTACCAGAGCAAGCTGCTGGAAGTG ATTGATCCCAGCGAATTGCCTGAGTTCCTTGGTGGCACTTGCACCTGCGAAGGCGGCTGC ATGCGCTCCGACAAAGGGCCATGGAAAGATCCTGAAATCATAAAGATGGTCCAATGTGGC ATGGGAAGATGTGGATTTAATAGCTCGGGTCATACTGAGGCTGATGAGAAGATGATCACT GAGGATGACATAGTGGCAATTCCCAAGAAGCAAGAATCAATTCGCCGTGATTCCGTTGAT TCACCCAAGATCCCACGCGAAAAGATTGAACATCCGCAGATGTCACCACTCCATGAGATG TCAACTTCAGAAAGCAAGGCTCCTCCTGGCCAAGAGGGAAGCTCTTCCCGATACGACGAT CTGTTCCCCATGCCGGACAAGAACATGGACTTCAACTGGAACGGCGAAGTCAGCGCCGAG AAGCTCGCACTCGCACGAGACATGTACGCGTCGCTGCCGGACGCGTACAAGCACGGCGAC GCCGGGGACCGGCAGGTGGTGACGGGGTTCATGGCGTTCGTGATGGGGGTGGTGGCGATG TTCCGGGTGGGGAAGATCGCGCCGAAGCGCGCCATGGACGCGGCGATGGGCATCGCGACG ATGGAGGCGATGGCCAAGAACCGGAAGCTGATGCAGCAGCAGCAGCGGCAGCTGGAGCAG CTCCCTGGCCCGGACACGGTGACGGTGTCGACGGCGCAGTACGAAGCGCTGATCAAGCGG CTCGGCGACCTCGAGGAGAAGGTGGCGGCGCTCACCTCCCGCCCTCCCGAGATGCCCGCC GACAAGGAGGACTTGCTCAAAGCCGCCGTCACCCGCGTCGAGGCCCTCGAGACCGAGCTC GAATCCACCAAGAAGCTTTTGGAGACTTCGTCGGGGCAGCAGGAGGAGGTGCTGGCCTAC ATCGAGAAGAAGAAGAAGAAGAGGGGGATGCAGAATCCATTCCGCTGGTGATGGACGGGT TTAAAGCAAGAAGCGGTGATGGAGCTCGGTCGTGCGTCTCGTGTGTTGTTTTGTGTGCGT CGTCGTCGCTGTATCTGACCCCGTTTGAAATGCGGAAAAAATTTTGCTATTTCTGCGGGA GTTGAGTTGAGTTGTTTCCTCCGGGATTTCTGTGAAATTCATGTTACATACTTCTTGTGT TTCAAAAGGGGCCTTATATGTGTATAGCAAAAGGAAAAAAAACAAACTTTTTCTTGCTTA CTGGACTGAACTGTGTACCCCACTGTTGTGCTGCACGTGCTTTATCAAACATATTACATG TACAGGCTGTATATATCTATTTTCTTC