Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0132100-00
CDS Infomation	cds chromosome:IRGSP-1.0:2:1669461:1671823:-1 gene:Os02g0132100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0132100-00)
Sequence	ATGGAGCTCGCCCGCAGGGTGTTCGACGCAATGCCGGAAAGGAACGAGTTCAGCTTCGGG ATCCTGGCGCGTGGGTACTGCCGTGCGGGGAGGAGTATGGACGCGCTTGGGGTGCTCGAT TCAATGCCAACGATGAATTTGGTGGTATGCAACACAGTAGTCGCGGGGTTCTGCCGCGAG GGCCAGGTGGATGAGGCTGAGAGGCTAGTTGAGCGCATGAGAGATGAGGGTCTTGCTCCA AATGTGGTCACATTCAATGCGAGGATCTCTGCACTCTGCAAAGCTGGGCGGGTGCTAGAT GCATACAGGATATTCAACGACATGCAGGAAAAATGGGAGAGAGGTCTGCCGAGGCCTGAC CAGGTGACGTTTGACGTGATGCTGAGTGGGTTCTGTGAGGCTGGTATGGTGGATGAAGCA AGAGTCCTGGTGGATATTATGAGGTGCGGTGGTTTCTTGAGGCGGGTTGAGAGTTACAAC CGTTGGTTGTCAGGGCTGGTGAGGAATGGAATGGTTGGGGAAGCACAGGAGCTGCTGAGG GAGATGGCGCATGAGGGTGTTCAACCTAATAGCTACACCTACAATATTATTGTGGATGGG TTGTGCAAGGAGGGCAAAGCGTTTGATGTGAGGAAAGTGGAGGATTTTGTGAAGAGTGGT GTCATGACACCAGATGTTGTGACCTATACTAGTTTGCTCCACGCTTATTGCTCAGAGGGA AATGCTGCTGCAGCCAATAGGATTCTTGATGAGATGGCACAGAAGGGGTGTGCCCCGAAT TCATTTACTTACAATGTTCTGCTGCAAAGTTTGTGGAAAGCTGGTAGGATTACAGAGGCA GAACGATTGTTAGAGAGGATGAGTGAGAAAGGATACAGCTTGGATACAGCAAGCTGCAAT ATCATTATTGATGGACTATGTAGAAACAACAAATTGGATATGGCCATGGACATTGTCGAT GGCATGTGGAACGAAGGTAGTTTGGCTCTTGGCAGATTAGGTTATTCATTCCTAAGTTTA CTTACTGATTCTTCCAGCAGCAAAAGATGTCTTCCTGACCGAATCACTTATTCTACACTG GTGAGTGCATTGTGCAAAGAGGGCAGGTTTGATGAAGCAAAGAAGAAATTGCTTGAGATG ATAGGCAAAGATATCTCTCCTGATTCGGTTCTATATGATACCTTTATTCATGGGTATTGC AAGCATGGGAAGACTTCTCTGGCTGTTAAGGTCCTGAGGGACATGGAAAAGAAAGGTTGC AAGCCAAGCACAAGGACATACAACTTGTTGATATGGGGATTTCGGGAAAAACACAATTCA GATGAAATCCTTAAATTGATTAGTGAAATGAAGGGGAAGGGGATTTGTCCCAATGTCATG ACCTATAATAGCCTGATAAAGTCATTTTGTGAACGGGGAATGGTGAACAAGGCCATGCCT CTTTTAGATGAAATGTTACAGAATGAAATTGTTCCTAATATAACTTCTTTTGAGTTGTTG ATTAAGGCTTTCTGCAAAACTTCAGATTTCTCTGCAGCTCAGAGAGTATTTGATGCTTCT CTGAGTACATGTGGTCAGAAGGAAGTGCTCTATAGTTTAATGTGCACCCAGTTATCTACT TATGGTAGATGGTTGGAAGCCATGAATATTCTAGAAACAGTGCTTGAATTAAGGATCTCT ATCCATAGATTCCCATATAAGCAGATTATTGAGGGACTCTGCAAAGTTGATGAGGTGGAT CATGGACATAGGTTACTCAAGCTGTTAATGGTTAAAGGATATTCATTTGATCCAGCAGCA TTCATGCCAGTGATTGATGCATTGAGTGAAAGGGGAAAGAAGCAACATGTTGATATGCTC TCACAAAAAATGATGGAAATGGCAGAGCGTGATAATGGTCTTGCAGCTCCTTCTGGCGAA TTTAAGCCTAGAAGTCAGAAGCATGGACAGGACAAGCATGCTGAAAGTGATTGGCATGCT CTTTTGCACAGAGATGACAGTGCTCGCACAGTCATGAAAATCACCAAGAGAGTGAAGACA GGATGGGGTCAAAGAGGCAACGTTTATGAGAATAAGCAGCAGCAGAATGATGACATTTAT GTACTAGAAAACACTGGCTGA

Peptide Sequence

PEP ID	Os02t0132100-00
PEP Infomation	pep chromosome:IRGSP-1.0:2:1669461:1671823:-1 gene:Os02g0132100 transcript:Os02t0132100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0132100-00)
Sequence	MELARRVFDAMPERNEFSFGILARGYCRAGRSMDALGVLDSMPTMNLVVCNTVVAGFCRE GQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPD QVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLR EMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEG NAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCN IIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTL VSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGC KPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMP LLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDASLSTCGQKEVLYSLMCTQLST YGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLMVKGYSFDPAA FMPVIDALSERGKKQHVDMLSQKMMEMAERDNGLAAPSGEFKPRSQKHGQDKHAESDWHA LLHRDDSARTVMKITKRVKTGWGQRGNVYENKQQQNDDIYVLENTG

Transcript Sequence

Transcript ID	Os02t0132100-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:1669461:1671823:-1 gene:Os02g0132100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0132100-00)
Sequence	ATGGAGCTCGCCCGCAGGGTGTTCGACGCAATGCCGGAAAGGAACGAGTTCAGCTTCGGG ATCCTGGCGCGTGGGTACTGCCGTGCGGGGAGGAGTATGGACGCGCTTGGGGTGCTCGAT TCAATGCCAACGATGAATTTGGTGGTATGCAACACAGTAGTCGCGGGGTTCTGCCGCGAG GGCCAGGTGGATGAGGCTGAGAGGCTAGTTGAGCGCATGAGAGATGAGGGTCTTGCTCCA AATGTGGTCACATTCAATGCGAGGATCTCTGCACTCTGCAAAGCTGGGCGGGTGCTAGAT GCATACAGGATATTCAACGACATGCAGGAAAAATGGGAGAGAGGTCTGCCGAGGCCTGAC CAGGTGACGTTTGACGTGATGCTGAGTGGGTTCTGTGAGGCTGGTATGGTGGATGAAGCA AGAGTCCTGGTGGATATTATGAGGTGCGGTGGTTTCTTGAGGCGGGTTGAGAGTTACAAC CGTTGGTTGTCAGGGCTGGTGAGGAATGGAATGGTTGGGGAAGCACAGGAGCTGCTGAGG GAGATGGCGCATGAGGGTGTTCAACCTAATAGCTACACCTACAATATTATTGTGGATGGG TTGTGCAAGGAGGGCAAAGCGTTTGATGTGAGGAAAGTGGAGGATTTTGTGAAGAGTGGT GTCATGACACCAGATGTTGTGACCTATACTAGTTTGCTCCACGCTTATTGCTCAGAGGGA AATGCTGCTGCAGCCAATAGGATTCTTGATGAGATGGCACAGAAGGGGTGTGCCCCGAAT TCATTTACTTACAATGTTCTGCTGCAAAGTTTGTGGAAAGCTGGTAGGATTACAGAGGCA GAACGATTGTTAGAGAGGATGAGTGAGAAAGGATACAGCTTGGATACAGCAAGCTGCAAT ATCATTATTGATGGACTATGTAGAAACAACAAATTGGATATGGCCATGGACATTGTCGAT GGCATGTGGAACGAAGGTAGTTTGGCTCTTGGCAGATTAGGTTATTCATTCCTAAGTTTA CTTACTGATTCTTCCAGCAGCAAAAGATGTCTTCCTGACCGAATCACTTATTCTACACTG GTGAGTGCATTGTGCAAAGAGGGCAGGTTTGATGAAGCAAAGAAGAAATTGCTTGAGATG ATAGGCAAAGATATCTCTCCTGATTCGGTTCTATATGATACCTTTATTCATGGGTATTGC AAGCATGGGAAGACTTCTCTGGCTGTTAAGGTCCTGAGGGACATGGAAAAGAAAGGTTGC AAGCCAAGCACAAGGACATACAACTTGTTGATATGGGGATTTCGGGAAAAACACAATTCA GATGAAATCCTTAAATTGATTAGTGAAATGAAGGGGAAGGGGATTTGTCCCAATGTCATG ACCTATAATAGCCTGATAAAGTCATTTTGTGAACGGGGAATGGTGAACAAGGCCATGCCT CTTTTAGATGAAATGTTACAGAATGAAATTGTTCCTAATATAACTTCTTTTGAGTTGTTG ATTAAGGCTTTCTGCAAAACTTCAGATTTCTCTGCAGCTCAGAGAGTATTTGATGCTTCT CTGAGTACATGTGGTCAGAAGGAAGTGCTCTATAGTTTAATGTGCACCCAGTTATCTACT TATGGTAGATGGTTGGAAGCCATGAATATTCTAGAAACAGTGCTTGAATTAAGGATCTCT ATCCATAGATTCCCATATAAGCAGATTATTGAGGGACTCTGCAAAGTTGATGAGGTGGAT CATGGACATAGGTTACTCAAGCTGTTAATGGTTAAAGGATATTCATTTGATCCAGCAGCA TTCATGCCAGTGATTGATGCATTGAGTGAAAGGGGAAAGAAGCAACATGTTGATATGCTC TCACAAAAAATGATGGAAATGGCAGAGCGTGATAATGGTCTTGCAGCTCCTTCTGGCGAA TTTAAGCCTAGAAGTCAGAAGCATGGACAGGACAAGCATGCTGAAAGTGATTGGCATGCT CTTTTGCACAGAGATGACAGTGCTCGCACAGTCATGAAAATCACCAAGAGAGTGAAGACA GGATGGGGTCAAAGAGGCAACGTTTATGAGAATAAGCAGCAGCAGAATGATGACATTTAT GTACTAGAAAACACTGGCTGA